mRNA_D-mesarthrocarpus_Contig10383.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: D7FKZ0_ECTSI (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ0_ECTSI) HSP 1 Score: 120 bits (301), Expect = 2.390e-29 Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P AA+ + K ++EGVAT++ELDEIK V+ SYEKDFE SK+WE AGD+WLSSKWSGFKSPRQLSRVR TGVD+ VLRS+G
Sbjct: 491 HPDTAAIFESKLLREGVATQDELDEIKNSVVESYEKDFEESKSWEPAGDEWLSSKWSGFKSPRQLSRVRSTGVDMNVLRSVG 572
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A835Z9M1_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M1_9STRA) HSP 1 Score: 116 bits (291), Expect = 5.390e-28 Identity = 55/83 (66.27%), Postives = 70/83 (84.34%), Query Frame = 1
Query: 94 DYPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
++P ++ + + + EGVA+KEELD IK FV SYE+DF+ASKTWE++ DDWLSSKWSGFKSPRQLSR+RQTGVD+KVLR +G
Sbjct: 506 NHPDTVSIFEARLLSEGVASKEELDGIKAFVQESYERDFDASKTWETSKDDWLSSKWSGFKSPRQLSRIRQTGVDLKVLRVVG 588
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A7R9WL04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WL04_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.720e-23 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +K+ + EGV +KEE DEI+ FVL SYEKDFEASKT E DWL++KW GFK P Q SR+R TGV++ VLR IG
Sbjct: 18 HPTTLELFEKRLIDEGVFSKEEADEIRQFVLDSYEKDFEASKTLEPNDTDWLATKWKGFKGPTQHSRIRPTGVEIDVLRDIG 99
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A7S0GI93_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GI93_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.480e-23 Identity = 46/83 (55.42%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 94 DYPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
D+P + +K+ +++G TKEE +EI+ F L SYE D EASK++ES +DWLSSKWSGFKSP+QLSRVR+TGV+++ L+ +G
Sbjct: 176 DHPTTLEVYEKRLIEDGTLTKEECEEIRSFTLKSYEADLEASKSYESTAEDWLSSKWSGFKSPKQLSRVRKTGVELETLKRVG 258
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A448ZD84_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD84_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.840e-22 Identity = 46/82 (56.10%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +K+ + EG T EE++EIK FV+ SYE D EASKT++ + DDWLSSKW+GFKSP Q+SR+R TGVD+++LR IG
Sbjct: 551 HPTALQLFEKRLVNEGTMTPEEIEEIKTFVMDSYENDLEASKTYQKSEDDWLSSKWAGFKSPTQMSRIRPTGVDIEMLRKIG 632
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A7S3LCB0_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCB0_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.510e-22 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +K+ + EG TKEE +EIK F L SYEKD EASKT+E DWLSS+W+GFK P QLSR+R TGVDV++LR IG
Sbjct: 556 HPTTLQIFEKRLVDEGTLTKEECEEIKAFTLDSYEKDLEASKTYEKKETDWLSSRWTGFKGPSQLSRIRDTGVDVEILRKIG 637
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A1E7FW89_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW89_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.420e-22 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +K+ +KEG TKEE+DEIK V+ SYEKD EASKT + DDWL+SKW+GFK P QLSR+R TGVD+ +LR IG
Sbjct: 545 HPTTLQIFEKRLIKEGTMTKEEIDEIKNNVMESYEKDLEASKTHVQSKDDWLASKWAGFKGPTQLSRIRSTGVDIDMLRKIG 626
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A7S2R3E7_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3E7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 4.670e-22 Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 94 DYPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
++P + +K+ ++ G TKEE+DEIK F L SYEKD E SK++ DDWLSSKW+GFKSP+QLSR+R TGVD+ VLR +G
Sbjct: 555 NHPATIEIFEKELLESGDVTKEEIDEIKKFTLDSYEKDLETSKSYVPKKDDWLSSKWTGFKSPKQLSRIRPTGVDIDVLRQVG 637
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: A0A1Z5KEQ8_FISSO (Oxoglutarate dehydrogenase (succinyl-transferring) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEQ8_FISSO) HSP 1 Score: 99.0 bits (245), Expect = 8.680e-22 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +KK + EG T+EE DEIK +V +YEKDFEASKT+ + DWLSS+WSGFK P QLSR+RQTGV+++ LR IG
Sbjct: 549 HPSTLKIFEKKLLDEGTLTQEECDEIKKYVQDNYEKDFEASKTYRKSETDWLSSRWSGFKGPSQLSRIRQTGVEIETLRKIG 630
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Match: B8CBX3_THAPS (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBX3_THAPS) HSP 1 Score: 98.2 bits (243), Expect = 1.610e-21 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 97 YPIVAAMKKKKKMKEGVATKEELDEIKGFVLSSYEKDFEASKTWESAGDDWLSSKWSGFKSPRQLSRVRQTGVDVKVLRSIG 342
+P + +KK ++EG +KEE++EI+ F L SYE D+EASKT++ +DWLSSKWSGFKSPRQ SR+R TGVD+ LR IG
Sbjct: 517 HPSTLEIFEKKLIEEGTMSKEEVEEIRAFTLQSYETDYEASKTYKPKPEDWLSSKWSGFKSPRQHSRIRPTGVDIDTLRYIG 598 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10383.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10383.2.1 >prot_D-mesarthrocarpus_Contig10383.2.1 ID=prot_D-mesarthrocarpus_Contig10383.2.1|Name=mRNA_D-mesarthrocarpus_Contig10383.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=114bp MILCVCVCVCYVRRITKKKKCELNPKPLGFYDYPIVAAMKKKKKMKEGVAback to top mRNA from alignment at D-mesarthrocarpus_Contig10383:3159..3972- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10383.2.1 ID=mRNA_D-mesarthrocarpus_Contig10383.2.1|Name=mRNA_D-mesarthrocarpus_Contig10383.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=814bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10383:3159..3972- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10383:3159..3972- >mRNA_D-mesarthrocarpus_Contig10383.2.1 ID=mRNA_D-mesarthrocarpus_Contig10383.2.1|Name=mRNA_D-mesarthrocarpus_Contig10383.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=342bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10383:3159..3972- (Discosporangium mesarthrocarpum MT17_79)back to top |