mRNA_D-mesarthrocarpus_Contig10368.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE) HSP 1 Score: 177 bits (450), Expect = 5.240e-50 Identity = 82/127 (64.57%), Postives = 100/127 (78.74%), Query Frame = 1
Query: 1 YDSPGWDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
YDSPGW+ +WC +FDTV GEWMDVDIPF +L FRT+++KDPPP + SIHSFQLMLSKFE DG LNP+F+ G F L SSIKAV +T ++ R+VH+SSAGVTRPG+P +D+D EPPAVRM
Sbjct: 395 YDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLKYNFRTESVKDPPPFSPDSIHSFQLMLSKFELDGKLNPNFSAGPFELTTSSIKAVSIETAEERQNSRLVHLSSAGVTRPGRPDLDIDTEPPAVRM 521
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.160e-49 Identity = 79/127 (62.20%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 YDSPGWDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
YDSPGW+ +WC +FDTV GEW+DVDIPF +L FRT+++KDPPP + SI+SFQLMLSKFE DG LNP+F+ G F L ++SIKAV +T+++ R VH+SSAGVTRPG+P +D+D EPPAVRM
Sbjct: 212 YDSPGWNSKAWCDTFDTVKGEWIDVDIPFTTLKYNFRTESIKDPPPFSPNSINSFQLMLSKFELDGKLNPNFSAGPFELTIASIKAVSIETSEEMQNSRFVHLSSAGVTRPGRPDLDMDTEPPAVRM 338
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A8J6ZF98_9CYAN (CIA30 family protein n=2 Tax=Fortiea sp. LEGE XX443 TaxID=1828611 RepID=A0A8J6ZF98_9CYAN) HSP 1 Score: 155 bits (393), Expect = 8.840e-43 Identity = 76/122 (62.30%), Postives = 91/122 (74.59%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + + SFDTVA W+DV IPF +L P+FR KT+KD PPLN I SFQLMLSKFEYDG LNP FTPG FSL + SIKA E T P+ + +SSAGVTRPG+PGI+L+EEPPAV++
Sbjct: 276 WDGLGYSYSFDTVANTWIDVRIPFANLVPVFRAKTVKDAPPLNASRISSFQLMLSKFEYDGALNPKFTPGAFSLEIESIKAYGEQTL-----PQFILVSSAGVTRPGRPGINLEEEPPAVKL 392
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: K9QD03_9NOSO (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=9 Tax=Nostocales TaxID=1161 RepID=K9QD03_9NOSO) HSP 1 Score: 153 bits (387), Expect = 6.610e-42 Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + + SFDTVA W++V IPF L+P+FR KT+KD PPL+ I SFQLMLSKFEYDG LNP FTPG FSL + SIKA T P+ V +SSAGVTRPG+PGI+LDEEPPAVR+
Sbjct: 276 WDGLGYSYSFDTVANTWINVRIPFAELTPVFRAKTVKDAPPLDASRISSFQLMLSKFEYDGALNPKFTPGGFSLQIESIKAYNGKTA-----PQFVLVSSAGVTRPGRPGINLDEEPPAVRL 392
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A1C0UXB2_9NOSO (NADH:ubiquinone oxidoreductase n=7 Tax=Nostocales TaxID=1161 RepID=A0A1C0UXB2_9NOSO) HSP 1 Score: 153 bits (387), Expect = 6.610e-42 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + + SFDT A W ++ IPF L+P+FR KT+KD PPLNT I SFQLMLSKFEYDG LNP FTPG F L V SIKA E T P+ + +SSAGVTRPG+PGI+LDEEPPAV++
Sbjct: 276 WDGLGYSYSFDTAANTWTNIRIPFAELTPVFRAKTVKDAPPLNTSRISSFQLMLSKFEYDGALNPKFTPGGFCLQVESIKAYGEKTL-----PKFILVSSAGVTRPGRPGINLDEEPPAVKL 392
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A7S2UWN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN3_9STRA) HSP 1 Score: 150 bits (380), Expect = 7.740e-41 Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 4 DSPGWDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
D WD +SWC SFDT AG+WMDV IPF P R+ ++ P L T I++FQ+ LSKFEYDG+LNP+FT G FSL + SIKA + + PR++++SSAGVTRPG+PGI LD+EPPAVRM
Sbjct: 266 DETRWDGISWCYSFDTEAGKWMDVRIPFKDFIPTLRSNSISGGPQLRTTEIYAFQITLSKFEYDGSLNPNFTAGSFSLVLDSIKAYERVSV-----PRVIYLSSAGVTRPGRPGIQLDQEPPAVRM 386
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A2G4EW76_9CYAN (NADH:ubiquinone oxidoreductase n=2 Tax=Tychonema TaxID=54312 RepID=A0A2G4EW76_9CYAN) HSP 1 Score: 150 bits (378), Expect = 1.210e-40 Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + +C SFDTV W+ + IPF+ L P+FR KT+KD LNT +I+SFQLMLSKFEYDG LNP FTPG F L + S+KA + PR V +SSAGVTRPG+PGI+L+EEPPAVRM
Sbjct: 272 WDGIGYCYSFDTVYNIWITITIPFEKLIPVFRAKTVKDGSKLNTKTIYSFQLMLSKFEYDGALNPKFTPGIFQLQLESVKAYADQEL-----PRFVMVSSAGVTRPGRPGINLEEEPPAVRM 388
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A1E5QFP3_9CYAN (NADH:ubiquinone oxidoreductase n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QFP3_9CYAN) HSP 1 Score: 150 bits (378), Expect = 1.270e-40 Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + + SFDT A +W+ V IPF L P+FR K ++D P L+T +++FQLMLSKFEYDG LNP F PG F+L + SIKA +TT PR +HISSAGVTRPGKPG++L+EEPPAVRM
Sbjct: 274 WDGIGYSYSFDTTANQWITVRIPFTDLVPVFRAKVVRDAPRLDTQRVYAFQLMLSKFEYDGALNPRFNPGGFALYIESIKAYGGNTT-----PRFIHISSAGVTRPGKPGLNLEEEPPAVRM 390
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A1L9QP56_9CYAN (NADH:ubiquinone oxidoreductase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1L9QP56_9CYAN) HSP 1 Score: 148 bits (374), Expect = 4.970e-40 Identity = 72/122 (59.02%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD +S+C SFDT+ WM VDIPFD L PIFR KTL PP + ++ QLMLSKFEYDG LNP F+PG+F L + SI+A P P+ V ISSAGVTRPG+PG++LDEEPPAVR+
Sbjct: 278 WDGISYCYSFDTLNNTWMTVDIPFDRLIPIFRAKTLPSAPPFDPSQTYAIQLMLSKFEYDGGLNPQFSPGRFGLEIGSIRAYG-----GPNLPKFVQISSAGVTRPGRPGLNLDEEPPAVRL 394
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Match: A0A0D6KEM6_9CYAN (Putative mucleoside-diphosphate-sugar epimerase n=6 Tax=Nostocales TaxID=1161 RepID=A0A0D6KEM6_9CYAN) HSP 1 Score: 148 bits (374), Expect = 5.120e-40 Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 16 WDRMSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMLSKFEYDGNLNPSFTPGKFSLAVSSIKAVKEDTTQDPLPPRIVHISSAGVTRPGKPGIDLDEEPPAVRM 381
WD + + SFDTVA W+D+ IPF L+P+FR KT+KD PP++ +I S QLMLSKFEYDG LNP FTPG FSL V SIKA P+ V +SSAGVTRPG+PGI+L+EEPPAVR+
Sbjct: 276 WDGLGYSYSFDTVANTWIDIRIPFADLTPVFRAKTVKDAPPIDASTISSLQLMLSKFEYDGALNPKFTPGGFSLQVESIKAYGGTNL-----PQFVLVSSAGVTRPGRPGINLEEEPPAVRL 392 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10368.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10368.1.1 >prot_D-mesarthrocarpus_Contig10368.1.1 ID=prot_D-mesarthrocarpus_Contig10368.1.1|Name=mRNA_D-mesarthrocarpus_Contig10368.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=119bp MSWCKSFDTVAGEWMDVDIPFDSLSPIFRTKTLKDPPPLNTLSIHSFQLMback to top mRNA from alignment at D-mesarthrocarpus_Contig10368:858..3893- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10368.1.1 ID=mRNA_D-mesarthrocarpus_Contig10368.1.1|Name=mRNA_D-mesarthrocarpus_Contig10368.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3036bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10368:858..3893- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10368:858..3893- >mRNA_D-mesarthrocarpus_Contig10368.1.1 ID=mRNA_D-mesarthrocarpus_Contig10368.1.1|Name=mRNA_D-mesarthrocarpus_Contig10368.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=357bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10368:858..3893- (Discosporangium mesarthrocarpum MT17_79)back to top |