mRNA_D-mesarthrocarpus_Contig1036.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.810e-58 Identity = 88/177 (49.72%), Postives = 122/177 (68.93%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
+R RS ++ CVGA+DGLF+ + +P ++ H P F SGH+KGFG+N Q A+CNARY TA ++CPGS NDRTA+ S + ++ LP G I+GD AYP SD++L P PGT L P +D++NF+ SQARI +E+AF +V TWGILW+PL+V L +++A +RLHNF
Sbjct: 102 YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQ-----AVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNF 273
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 194 bits (492), Expect = 4.040e-57 Identity = 88/177 (49.72%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
+R RS G++ CVGA+DGLF+R+ +P ++ H P F SGH+KGFG+N Q +CNARY A ++CPGS NDRTA+ S + ++ LP G I+GDAAYP SD++L P PGT L +DA+NF+ SQARI++E+AF I+V TWGILW+PL + L ++++ +RLHNF
Sbjct: 168 YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ-----GVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNF 339
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.080e-55 Identity = 88/177 (49.72%), Postives = 117/177 (66.10%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
+R RS G++ CVGA+DGLF+R+ P +K H P F SGH+K FG+N Q ICNA Y ++CPGS NDRTA+ S + + +P I+GDAAYP S+R+L P PGT L +DA+NF+ SQARI++E+AF ILV TW ILWKPL + L G +++A +RLHNF
Sbjct: 172 YRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ-----GICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNF 343
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.540e-51 Identity = 82/177 (46.33%), Postives = 117/177 (66.10%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
FR RS ++ CVGA DGLF+R+ KP KE P + +GH+KGFG+N Q A+C+A+Y A ++CPGS NDRTA+N S + LP+G+ ++GDAAY S+R++ P PGT L +DA N++ SQ R+A+E+ + ILV WGILW+P+ V + +V+A +RLHNF
Sbjct: 161 FRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-----AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNF 332
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 169 bits (429), Expect = 2.090e-49 Identity = 77/169 (45.56%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 49 IMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
++ CVGA+DGLF+R+ KP KE P + +GH+ GFG+N Q A+C+A+Y A +SCPGS NDRTA+N + + LP+G+ ++GDAAY S+R++ P PGT L +DA N++ SQ R+A+E+ + ILV WGILW+P+ V + +V+A +RLHNF
Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQ-----AVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNF 180
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE) HSP 1 Score: 172 bits (435), Expect = 2.020e-48 Identity = 86/180 (47.78%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 16 AAGFRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
A + +S G CV A DGLF++ P V P F SGH+ G+GLN+Q T C+A Y F + GSTND TAWN S + V LP G+ ++GDAAYP SD+LLTP PG L D+DAFNF+ SQ R+ +E+AF ILV WGILW+PLRV ++ A RLHNF
Sbjct: 187 AREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQAT-----CDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILVGQWGILWRPLRVQFAGRSGLITALFRLHNF 361
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5JWD7_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD7_9PHAE) HSP 1 Score: 167 bits (422), Expect = 7.810e-48 Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 1
Query: 16 AAGFRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
A + A+S G+ CV A DGLF++ P + P + SG++ G+GLN+Q T C+A Y F + G+TND TAWN S++ V LP GY ++GDAAYP SD LLTP PG L DED+FNF SQ R+ +E+A+ ILV WGILW+PLRV ++ A RLHN+
Sbjct: 54 AKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQAT-----CDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRPLRVQFAGRSALITALFRLHNY 228
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE) HSP 1 Score: 167 bits (422), Expect = 5.340e-47 Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 1
Query: 16 AAGFRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
A + A+S G+ CV A DGLF++ P + P + SG++ G+GLN+Q T C+A Y F + G+TND TAWN S++ V LP GY ++GDAAYP SD LLTP PG L DED+FNF SQ R+ +E+A+ ILV WGILW+PLRV ++ A RLHN+
Sbjct: 188 AKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQAT-----CDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRPLRVQFAGRSALITALFRLHNY 362
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE) HSP 1 Score: 168 bits (425), Expect = 6.960e-47 Identity = 85/177 (48.02%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
F+ +S GI V AVDGLFI+ PR KE + SG + +G+N+Q A+C A Y F A PGSTND AWN S++ V LP G+ IIGDAAYP ++LLTP PG L ED+FNF SQ R+ +E++F ILV TWGILW+PLRV L ++ A LHNF
Sbjct: 202 FKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQ-----AMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNF 373
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Match: A0A6H5K9T7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T7_9PHAE) HSP 1 Score: 163 bits (413), Expect = 1.840e-46 Identity = 82/177 (46.33%), Postives = 106/177 (59.89%), Query Frame = 1
Query: 25 FRARSEQGIMDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICNARYIFTAGCVSCPGSTNDRTAWNMSNVKSKVEMLPDGY*IIGDAAYPPSDRLLTPSPGTCLCPDEDAFNFFHSQARIAVEEAFDILVMTWGILWKPLRVSLHSTGKIVHACMRLHNF 555
F+ +S GI V AVDGLFI+ P K+ + SG + +G+N+Q A+C A Y F A PGSTND AWN S++ V LP G+ IIGDAAYP ++LLTPSPG L P ED+FNF SQ R+ +E++F ILV TWGI W+PLRV ++ A LH+F
Sbjct: 79 FKEKSTDGIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGRKSAYGINVQ-----AMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPSPGRLLPPGEDSFNFHLSQLRVKIEQSFGILVSTWGIQWRPLRVQFGGRADLITALFYLHHF 250 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1036.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1036.4.1 >prot_D-mesarthrocarpus_Contig1036.4.1 ID=prot_D-mesarthrocarpus_Contig1036.4.1|Name=mRNA_D-mesarthrocarpus_Contig1036.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=90bp MDHCVGAVDGLFIRVHKPRVKEHPAPARFCSGHRKGFGLNLQETSKRAICback to top mRNA from alignment at D-mesarthrocarpus_Contig1036:5978..6654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1036.4.1 ID=mRNA_D-mesarthrocarpus_Contig1036.4.1|Name=mRNA_D-mesarthrocarpus_Contig1036.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=677bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1036:5978..6654+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1036:5978..6654+ >mRNA_D-mesarthrocarpus_Contig1036.4.1 ID=mRNA_D-mesarthrocarpus_Contig1036.4.1|Name=mRNA_D-mesarthrocarpus_Contig1036.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=270bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1036:5978..6654+ (Discosporangium mesarthrocarpum MT17_79)back to top |