mRNA_D-mesarthrocarpus_Contig10358.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A835YS18_9STRA (WD40-repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS18_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.300e-28 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 19 LTLID--TFEEVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
+T +D T E +K+H MP+NFKNEGGASLHP+G RFIAGGSDLWVRVFD+ TG E+ECLKGHHGP
Sbjct: 215 VTFLDARTLEVIKQHQMPINFKNEGGASLHPSGKRFIAGGSDLWVRVFDFETGAELECLKGHHGP 279
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A6H5KS17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS17_9PHAE) HSP 1 Score: 103 bits (258), Expect = 1.940e-25 Identity = 48/73 (65.75%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 10 TAHLTLIDTFEEVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLK-------GHHGP 207
T H EVKRH MP+NF+NEGGASLHP G RFIAGGSDLWVRVFD+ TG E+ECLK GHHGP
Sbjct: 174 TVHFFDTGDLSEVKRHTMPINFRNEGGASLHPGGKRFIAGGSDLWVRVFDFDTGAELECLKASRGRARGHHGP 246
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A7R9Z9Z2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z9Z2_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.620e-24 Identity = 40/60 (66.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 28 IDTFEEVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
+ T+E V+ HPMP++F++EGGASLHP G +F+AGGSDLWVR+FD+ +GKE+EC KGHHGP
Sbjct: 255 LSTYELVRSHPMPIHFRDEGGASLHPDGKKFVAGGSDLWVRLFDFDSGKELECHKGHHGP 314
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A7S2WFT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFT6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.010e-22 Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 55 HPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
H MP++F+ EGGAS+HPAGDRFIAGGSD WVRVFD TG E EC KGHHGP
Sbjct: 58 HTMPISFREEGGASMHPAGDRFIAGGSDTWVRVFDRQTGTETECHKGHHGP 108
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A7S2WLX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLX8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.070e-22 Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 1
Query: 34 TFEEVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHG 204
T E + +H MP+NF +EGGASLHP+G +FIAGGSDLWVRVFD+ +G E+EC KGHHG
Sbjct: 75 TGELLYKHKMPINFHDEGGASLHPSGAKFIAGGSDLWVRVFDFESGNELECNKGHHG 131
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A4D9D672_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D672_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.120e-22 Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 MCGTAHLTLIDTFE--EVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
+C +T +DT +K PMPM+F+ EGGASLHP FIAGGSDLWVRVFDY TG E+EC KGHHGP
Sbjct: 211 VCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGP 281
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A7S2XYA9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.310e-22 Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 46 VKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
+K H MP+NF+ EGGASLHP +FIAGGSDLWVRVFDY TG+E+EC KGHHGP
Sbjct: 228 LKAHQMPVNFREEGGASLHPDKTKFIAGGSDLWVRVFDYETGQELECHKGHHGP 281
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: W7TNK1_9STRA (Cell division protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNK1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.680e-22 Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 MCGTAHLTLIDTFE--EVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
+C +T +DT +K PMPM+F+ EGGASLHP FIAGGSDLWVRVFDY TG E+EC KGHHGP
Sbjct: 211 VCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGP 281
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A7S2C514_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C514_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 7.930e-22 Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 16 HLTLID--TFEEVKRHPMPM-NFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
H+++ D TFE ++ H MP +F+ EGGASLHP+GD+FIAGG D WVRVFD TG E+EC KGHHGP
Sbjct: 147 HVSMFDAGTFELLQSHEMPSCSFREEGGASLHPSGDKFIAGGGDCWVRVFDRQTGAELECHKGHHGP 213
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Match: A0A6U3S695_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S695_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.640e-21 Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 55 HPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRVFDYPTGKEMECLKGHHGP 207
H MP++F++EGGASLHP G +F+AGGSDLWVRVFDY TG E+EC KGHHGP
Sbjct: 258 HQMPIHFRDEGGASLHPDGKKFVAGGSDLWVRVFDYETGTELECHKGHHGP 308 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10358.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10358.2.1 >prot_D-mesarthrocarpus_Contig10358.2.1 ID=prot_D-mesarthrocarpus_Contig10358.2.1|Name=mRNA_D-mesarthrocarpus_Contig10358.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=69bp MCGTAHLTLIDTFEEVKRHPMPMNFKNEGGASLHPAGDRFIAGGSDLWVRback to top mRNA from alignment at D-mesarthrocarpus_Contig10358:487..1494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10358.2.1 ID=mRNA_D-mesarthrocarpus_Contig10358.2.1|Name=mRNA_D-mesarthrocarpus_Contig10358.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10358:487..1494- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10358:487..1494- >mRNA_D-mesarthrocarpus_Contig10358.2.1 ID=mRNA_D-mesarthrocarpus_Contig10358.2.1|Name=mRNA_D-mesarthrocarpus_Contig10358.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=207bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10358:487..1494- (Discosporangium mesarthrocarpum MT17_79)back to top |