mRNA_D-mesarthrocarpus_Contig10357.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10357.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10357.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: D7FKG1_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG1_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 4.130e-34
Identity = 66/76 (86.84%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STLKKGEAGY+ RLMDIR+LKL+CGDLMRDL+IARGS+NQM+E+R
Sbjct:  619 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLKKGEAGYSMRLMDIRTLKLKCGDLMRDLAIARGSSNQMEELR 694
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A7S2UW42_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW42_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.390e-28
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL+KGE  YTQRL DIR+LKL+  DL R+L IA+ S NQMD++R
Sbjct:   33 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLRKGETQYTQRLQDIRTLKLKTTDLHRELRIAKSSNNQMDDLR 108
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A836CGY9_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY9_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.810e-25
Identity = 52/76 (68.42%), Postives = 67/76 (88.16%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y QR++D+R+L+L+  DL RDL++ + S+NQ++E++
Sbjct:  596 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLAKGEASYAQRMVDLRALRLKAQDLARDLALCKNSSNQVEELK 671
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A5D6Y8U6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8U6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.610e-24
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +V+NERDILGTQLIRRNDELALLYEKLKIQHSTL KGEA Y +R+ D+R LKL+  DL R+L IA+    Q DE++
Sbjct: 1011 QVLNERDILGTQLIRRNDELALLYEKLKIQHSTLSKGEAQYQERMQDVRVLKLKITDLKRELHIAKHQVGQADELK 1086
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A225X4F6_9STRA (Flagellar associated protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A225X4F6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.930e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +RL DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  622 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELK 697
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A0P1AES3_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AES3_PLAHL)

HSP 1 Score: 102 bits (253), Expect = 1.930e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +RL DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  625 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYLERLQDIRVLKLKVTDLKRELYIAKHQVGQSDELK 700
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BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A8K1CHY7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHY7_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 1.930e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +RL DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  622 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKITDLKRELYIAKHQVGQSDELK 697
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A3R7I279_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7I279_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.940e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +RL DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  959 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELK 1034
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: A0A0W8DQ27_PHYNI (Lipase_3 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DQ27_PHYNI)

HSP 1 Score: 102 bits (253), Expect = 1.950e-23
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +RL DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  623 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELK 698
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Match: K3WJT3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJT3_GLOUD)

HSP 1 Score: 101 bits (251), Expect = 3.600e-23
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:   16 KVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRLMDIRSLKLRCGDLMRDLSIARGSTNQMDEMR 243
            +VINERDILGTQLIRRNDELALLYEKLKIQ STL KGEA Y +R+ DIR LKL+  DL R+L IA+    Q DE++
Sbjct:  616 QVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERMQDIRVLKLKITDLKRELYIAKHQVGQSDELK 691
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10357.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKG1_ECTSI4.130e-3486.84Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S2UW42_9STRA1.390e-2876.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGY9_9STRA1.810e-2568.42Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A5D6Y8U6_9STRA5.610e-2468.42Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A225X4F6_9STRA1.930e-2371.05Flagellar associated protein n=23 Tax=Peronosporac... [more]
A0A0P1AES3_PLAHL1.930e-2371.05Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A8K1CHY7_PYTOL1.930e-2371.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7I279_9STRA1.940e-2371.05Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0W8DQ27_PHYNI1.950e-2371.05Lipase_3 domain-containing protein n=1 Tax=Phytoph... [more]
K3WJT3_GLOUD3.600e-2369.74Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10357contigD-mesarthrocarpus_Contig10357:2369..3214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKG1
Preferred nameFAP189
Model size243
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0060285
Exons2
Evalue6.77e-35
EggNOG OGs28HHA@1|root,2QPV7@2759|Eukaryota
Cds size243
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789175.0842237-CDS-D-mesarthrocarpus_Contig10357:2368..24911680789175.0842237-CDS-D-mesarthrocarpus_Contig10357:2368..2491Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10357 2369..2491 +
1680789175.0958848-CDS-D-mesarthrocarpus_Contig10357:3094..32141680789175.0958848-CDS-D-mesarthrocarpus_Contig10357:3094..3214Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10357 3095..3214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10357.1.1prot_D-mesarthrocarpus_Contig10357.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10357 2369..3214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10357.1.1

>prot_D-mesarthrocarpus_Contig10357.1.1 ID=prot_D-mesarthrocarpus_Contig10357.1.1|Name=mRNA_D-mesarthrocarpus_Contig10357.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=81bp
SLLNLKVINERDILGTQLIRRNDELALLYEKLKIQHSTLKKGEAGYTQRL
MDIRSLKLRCGDLMRDLSIARGSTNQMDEMR
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mRNA from alignment at D-mesarthrocarpus_Contig10357:2369..3214+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10357.1.1 ID=mRNA_D-mesarthrocarpus_Contig10357.1.1|Name=mRNA_D-mesarthrocarpus_Contig10357.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=846bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10357:2369..3214+ (Discosporangium mesarthrocarpum MT17_79)
TCCCTCCTGAACCTAAAGGTGATCAATGAGAGGGACATCCTGGGCACACA
GTTGATACGGCGGAACGACGAGCTGGCTCTCCTGTACGAGAAGTTAAAGA
TACAGCACAGCACGCTGAAAAAGGTTGGGAGAAACCTTTCCCTTCCCCTT
CCTCTCCCCCTTCCCCTTTCCCTTCCCCTTTCCCTTTCTCTTTCCCCTCG
CGGTTTTTACCTCTCCCCCTCTCCCCTTCCCCTTCCCCTTCCCATTTCTC
TTTCCCCTCGCAGTTTTTACCTCTCCCCTTCTCCCCTTCCCCTTCCCTTC
GTTCCTTGCATCTCTCTTTTGGCACCAAAACAGGGAATAGAGTCACCCAC
CCCCGCTCCACCCCACCCCTGACTGTTCGGTCAATTCACACTCATAATTC
AGTATCCCTTCCAACATTGAGTGTCCCCCTCAATCCCTTGATGAGATACG
GTACGCAGTCGGCGCACAACAAAAGTGGGGTCAGGGTTAGAGGGCTAGGG
TTAGTTAGGGTTAGGGTAGGGCGTGGTTTCGCTCCGCCGCCGAACGAATC
TCGCCGCGTTTTTTGCTCAACAAAAAACAAAAAAAAAAACAACGAAACAC
CTCCTGGAAAAAGAAAAAAAAGAAAAAAAGAACCCTAGCGGCGAGACCGA
AACCGACAGGAATCGACAAAACTCTCGTCTTCGTGTTCTCCTCTTGCCGT
TCTCGATCAAATCTTCACGTTCTTAGGGGGAGGCCGGGTACACCCAGCGC
CTCATGGACATCCGGTCCCTGAAGCTGAGGTGTGGGGATCTCATGCGAGA
CCTCTCCATCGCACGGGGGTCCACCAACCAGATGGATGAGATGCGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10357:2369..3214+

>mRNA_D-mesarthrocarpus_Contig10357.1.1 ID=mRNA_D-mesarthrocarpus_Contig10357.1.1|Name=mRNA_D-mesarthrocarpus_Contig10357.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=243bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10357:2369..3214+ (Discosporangium mesarthrocarpum MT17_79)
TCCCTCCTGAACCTAAAGGTGATCAATGAGAGGGACATCCTGGGCACACA
GTTGATACGGCGGAACGACGAGCTGGCTCTCCTGTACGAGAAGTTAAAGA
TACAGCACAGCACGCTGAAAAAGGGGGAGGCCGGGTACACCCAGCGCCTC
ATGGACATCCGGTCCCTGAAGCTGAGGTGTGGGGATCTCATGCGAGACCT
CTCCATCGCACGGGGGTCCACCAACCAGATGGATGAGATGCGC
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