mRNA_D-mesarthrocarpus_Contig10351.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10351.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10351.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A6H5LB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB88_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.590e-17
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query:   31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            +M++KYTS GPCLVEVGSRCHGGEGTWQPIAQEC+GY Q+
Sbjct:  772 HMEVKYTSTGPCLVEVGSRCHGGEGTWQPIAQECLGYNQI 811          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.590e-17
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query:   31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            +M++KYTS GPCLVEVGSRCHGGEGTWQPIAQEC+GY Q+
Sbjct:  848 HMEVKYTSTGPCLVEVGSRCHGGEGTWQPIAQECLGYNQI 887          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.090e-15
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query:   31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            +M+IK T  GPCLVEVGSRCHGGEGTWQPIA EC+GY Q+
Sbjct:  836 HMEIKVTPSGPCLVEVGSRCHGGEGTWQPIANECVGYNQI 875          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.600e-14
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query:   28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            ++M++K TS GPCLVEVGSRCHGGEGTW PIA+ C GY+QV
Sbjct:  420 SHMEVKLTSTGPCLVEVGSRCHGGEGTWVPIAEACYGYSQV 460          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.590e-13
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query:    7 LTXXXXXTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            LT     ++M++K T  GPCLVE+G+RCHGGEGTW PIA+ C GY+QV
Sbjct:  404 LTIHNGPSHMEVKITHDGPCLVEMGARCHGGEGTWVPIAEACYGYSQV 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A812T6K5_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T6K5_SYMMI)

HSP 1 Score: 69.7 bits (169), Expect = 1.940e-12
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1
Query:   28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            ++M++  T  GPCLVEVGSRCHGGE TW  +AQEC+GYTQ+
Sbjct:  451 SHMEVILTPTGPCLVEVGSRCHGGEATWSTVAQECIGYTQI 491          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S0XE07_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE07_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.670e-12
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   28 TYMQIKYTSR-GPCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRIRV 168
            ++M++ Y  + GPCLVEVG+RC GGEGTW P+A+EC+GYTQV V + V
Sbjct:  368 SHMEVMYNPKTGPCLVEVGARCQGGEGTWLPVAKECVGYTQVQVTLDV 415          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7R9YE89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE89_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.620e-12
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1
Query:    7 LTXXXXXTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
            LT     ++M++     GPCLVEVG+RCHGGEGTW PIA+ C GYTQV
Sbjct:  397 LTIRNGPSHMEVMVMDDGPCLVEVGARCHGGEGTWCPIAKACYGYTQV 444          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7R9YF27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF27_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.030e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1
Query:   28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRI 162
            ++M+IK T+ GPCLVEVGSRCHGGEGTW PIA+    YT V V +
Sbjct:  175 SHMEIKLTATGPCLVEVGSRCHGGEGTWLPIAERAYKYTMVDVTL 219          
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A482SXB2_9ARCH (ATP-grasp domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXB2_9ARCH)

HSP 1 Score: 62.8 bits (151), Expect = 5.360e-10
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 1
Query:   61 PCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRI 162
            PCLVEVG+RCHGGEGTW P+ QEC+GY+ V V +
Sbjct:  230 PCLVEVGARCHGGEGTWLPVVQECVGYSMVGVTL 263          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB88_9PHAE2.590e-1782.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXU1_ECTSI2.590e-1782.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z961_9STRA7.090e-1577.50ATP-grasp domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1U8K3_9STRA4.600e-1473.17Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XUT4_9STRA5.590e-1360.42Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A812T6K5_SYMMI1.940e-1265.85DdaF protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S0XE07_9STRA2.670e-1260.42Hypothetical protein n=2 Tax=Chromulina nebulosa T... [more]
A0A7R9YE89_9STRA3.620e-1260.42Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7R9YF27_9STRA1.030e-1164.44Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A482SXB2_9ARCH5.360e-1070.59ATP-grasp domain-containing protein n=1 Tax=archae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10351contigD-mesarthrocarpus_Contig10351:3387..3569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FXU1
PFAMsATP-grasp_4
Model size183
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.24e-18
EggNOG OGsCOG0439@1|root,2QUGS@2759|Eukaryota
DescriptionATP-grasp domain
Cds size183
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.9552033-CDS-D-mesarthrocarpus_Contig10351:3386..35691680789174.9552033-CDS-D-mesarthrocarpus_Contig10351:3386..3569Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10351 3387..3569 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10351.3.1prot_D-mesarthrocarpus_Contig10351.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10351 3387..3569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10351.3.1

>prot_D-mesarthrocarpus_Contig10351.3.1 ID=prot_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=61bp
LTLTLTLTLTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV
WVRIRVGSWA*
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mRNA from alignment at D-mesarthrocarpus_Contig10351:3387..3569-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10351.3.1 ID=mRNA_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:3387..3569- (Discosporangium mesarthrocarpum MT17_79)
CTAACCCTAACCCTAACCCTAACCCTGACTTACATGCAGATCAAGTACAC GTCCAGGGGGCCCTGCCTGGTGGAGGTGGGAAGCCGGTGCCACGGCGGGG AGGGGACCTGGCAACCCATCGCCCAGGAGTGCATGGGATATACCCAGGTA TGGGTTAGGATTAGGGTTGGGAGTTGGGCTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10351:3387..3569-

>mRNA_D-mesarthrocarpus_Contig10351.3.1 ID=mRNA_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:3387..3569- (Discosporangium mesarthrocarpum MT17_79)
CTAACCCTAACCCTAACCCTAACCCTGACTTACATGCAGATCAAGTACAC
GTCCAGGGGGCCCTGCCTGGTGGAGGTGGGAAGCCGGTGCCACGGCGGGG
AGGGGACCTGGCAACCCATCGCCCAGGAGTGCATGGGATATACCCAGGTA
TGGGTTAGGATTAGGGTTGGGAGTTGGGCTTAG
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