mRNA_D-mesarthrocarpus_Contig10351.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A6H5LB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB88_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.590e-17 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query: 31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
+M++KYTS GPCLVEVGSRCHGGEGTWQPIAQEC+GY Q+
Sbjct: 772 HMEVKYTSTGPCLVEVGSRCHGGEGTWQPIAQECLGYNQI 811
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 2.590e-17 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query: 31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
+M++KYTS GPCLVEVGSRCHGGEGTWQPIAQEC+GY Q+
Sbjct: 848 HMEVKYTSTGPCLVEVGSRCHGGEGTWQPIAQECLGYNQI 887
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.090e-15 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query: 31 YMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
+M+IK T GPCLVEVGSRCHGGEGTWQPIA EC+GY Q+
Sbjct: 836 HMEIKVTPSGPCLVEVGSRCHGGEGTWQPIANECVGYNQI 875
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.600e-14 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
++M++K TS GPCLVEVGSRCHGGEGTW PIA+ C GY+QV
Sbjct: 420 SHMEVKLTSTGPCLVEVGSRCHGGEGTWVPIAEACYGYSQV 460
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 5.590e-13 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 7 LTXXXXXTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
LT ++M++K T GPCLVE+G+RCHGGEGTW PIA+ C GY+QV
Sbjct: 404 LTIHNGPSHMEVKITHDGPCLVEMGARCHGGEGTWVPIAEACYGYSQV 451
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A812T6K5_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T6K5_SYMMI) HSP 1 Score: 69.7 bits (169), Expect = 1.940e-12 Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
++M++ T GPCLVEVGSRCHGGE TW +AQEC+GYTQ+
Sbjct: 451 SHMEVILTPTGPCLVEVGSRCHGGEATWSTVAQECIGYTQI 491
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7S0XE07_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE07_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.670e-12 Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 28 TYMQIKYTSR-GPCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRIRV 168
++M++ Y + GPCLVEVG+RC GGEGTW P+A+EC+GYTQV V + V
Sbjct: 368 SHMEVMYNPKTGPCLVEVGARCQGGEGTWLPVAKECVGYTQVQVTLDV 415
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7R9YE89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE89_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.620e-12 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 7 LTXXXXXTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQV 150
LT ++M++ GPCLVEVG+RCHGGEGTW PIA+ C GYTQV
Sbjct: 397 LTIRNGPSHMEVMVMDDGPCLVEVGARCHGGEGTWCPIAKACYGYTQV 444
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A7R9YF27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF27_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.030e-11 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 28 TYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRI 162
++M+IK T+ GPCLVEVGSRCHGGEGTW PIA+ YT V V +
Sbjct: 175 SHMEIKLTATGPCLVEVGSRCHGGEGTWLPIAERAYKYTMVDVTL 219
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Match: A0A482SXB2_9ARCH (ATP-grasp domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXB2_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 5.360e-10 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 61 PCLVEVGSRCHGGEGTWQPIAQECMGYTQVWVRI 162
PCLVEVG+RCHGGEGTW P+ QEC+GY+ V V +
Sbjct: 230 PCLVEVGARCHGGEGTWLPVVQECVGYSMVGVTL 263 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10351.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10351.3.1 >prot_D-mesarthrocarpus_Contig10351.3.1 ID=prot_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=61bp LTLTLTLTLTYMQIKYTSRGPCLVEVGSRCHGGEGTWQPIAQECMGYTQVback to top mRNA from alignment at D-mesarthrocarpus_Contig10351:3387..3569- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10351.3.1 ID=mRNA_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:3387..3569- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10351:3387..3569- >mRNA_D-mesarthrocarpus_Contig10351.3.1 ID=mRNA_D-mesarthrocarpus_Contig10351.3.1|Name=mRNA_D-mesarthrocarpus_Contig10351.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:3387..3569- (Discosporangium mesarthrocarpum MT17_79)back to top |