mRNA_D-mesarthrocarpus_Contig10351.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10351.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10351.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 3.570e-11
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 1 
Query:    1 TLEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDY 117
            TLEM+ QPGS L+KT DCFTRPG+VQLV++D++QL+ DY
Sbjct:  944 TLEMTAQPGSYLRKTVDCFTRPGAVQLVNEDKEQLMADY 982
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A6H5LB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB88_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.570e-11
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 1 
Query:    1 TLEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDY 117
            TLEM+ QPGS L+KT DCFTRPG+VQLV++D++QL+ DY
Sbjct:  868 TLEMTAQPGSYLRKTVDCFTRPGAVQLVNEDKEQLMADY 906
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A482T3N5_9ARCH (LAL_C2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3N5_9ARCH)

HSP 1 Score: 55.5 bits (132), Expect = 6.190e-8
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYE 120
            LEM  QPG+ ++ T DCFTRPGSVQ+V+K  D L +DY+
Sbjct:  185 LEMLTQPGASIRPTIDCFTRPGSVQMVNKSADALQRDYD 223
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S3HD13_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD13_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYE 120
            +EM  QPGS L +T DCFTRPGSVQLV+ +  QL  DY+
Sbjct:  922 MEMLTQPGSTLHRTVDCFTRPGSVQLVNANAHQLHTDYQ 960
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S0XE07_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE07_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDY 117
            +EM  QPG+ +  T DCFTRPGSVQLV++D +QL +DY
Sbjct:  902 IEMLTQPGATIYPTIDCFTRPGSVQLVNEDLNQLEEDY 939
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.810e-7
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYE 120
            LE+  +PG     TTDCFTRPGSVQL+HKD + +  DY+
Sbjct:  518 LELMCKPGDFQALTTDCFTRPGSVQLLHKDDNVVKSDYD 556
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.810e-7
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYE 120
            LE+  +PG     TTDCFTRPGSVQL+HKD + +  DY+
Sbjct:  509 LELMCKPGDFQALTTDCFTRPGSVQLLHKDDNVVKSDYD 547
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    7 EMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYEK 123
            E++ +P   + +T DCFTRPGS QLVH +   +L+DYE+
Sbjct:  507 EVAAKPRDFVYRTVDCFTRPGSAQLVHGEEAVVLRDYER 545
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S3JRM9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRM9_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 20/37 (54.05%), Postives = 24/37 (64.86%), Query Frame = 1 
Query:    4 LEMSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKD 114
            +E  ++ G     TTDCFTRPGS QL+H  RDQL  D
Sbjct:  301 IEWQLKEGDFAPLTTDCFTRPGSAQLIHTSRDQLAID 337
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BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Match: A0A7S3XXR5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXR5_HETAK)

HSP 1 Score: 47.4 bits (111), Expect = 5.520e-5
Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 1 
Query:   13 SIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYE 120
            + QPG  + KT+ CFTRPGSVQLVH    Q+  DYE
Sbjct:  126 NFQPGMEVVKTSSCFTRPGSVQLVHISAAQVDADYE 161
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10351.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FXU1_ECTSI3.570e-1169.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LB88_9PHAE3.570e-1169.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482T3N5_9ARCH6.190e-858.97LAL_C2 domain-containing protein n=1 Tax=archaeon ... [more]
A0A7S3HD13_9STRA1.210e-761.54Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0XE07_9STRA2.270e-760.53Hypothetical protein n=2 Tax=Chromulina nebulosa T... [more]
A0A7S1U8K3_9STRA5.810e-756.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XUT4_9STRA5.810e-756.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835Z961_9STRA1.330e-548.72ATP-grasp domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3JRM9_9STRA1.830e-554.05Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3XXR5_HETAK5.520e-558.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10351contigD-mesarthrocarpus_Contig10351:1091..1216 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXU1
PFAMsATP-grasp_4
Model size126
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.17e-10
EggNOG OGsCOG0439@1|root,2QUGS@2759|Eukaryota
DescriptionATP-grasp domain
Cds size117
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.8981538-CDS-D-mesarthrocarpus_Contig10351:1090..12071680789174.8981538-CDS-D-mesarthrocarpus_Contig10351:1090..1207Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10351 1091..1207 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.9166448-UTR-D-mesarthrocarpus_Contig10351:1207..12161680789174.9166448-UTR-D-mesarthrocarpus_Contig10351:1207..1216Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10351 1208..1216 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10351.2.1prot_D-mesarthrocarpus_Contig10351.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10351 1091..1207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10351.2.1

>prot_D-mesarthrocarpus_Contig10351.2.1 ID=prot_D-mesarthrocarpus_Contig10351.2.1|Name=mRNA_D-mesarthrocarpus_Contig10351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=39bp
MSIQPGSLLQKTTDCFTRPGSVQLVHKDRDQLLKDYEK*
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mRNA from alignment at D-mesarthrocarpus_Contig10351:1091..1216-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10351.2.1 ID=mRNA_D-mesarthrocarpus_Contig10351.2.1|Name=mRNA_D-mesarthrocarpus_Contig10351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=126bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:1091..1216- (Discosporangium mesarthrocarpum MT17_79)
ACACTGGAGATGTCGATACAGCCTGGTTCACTCCTTCAGAAGACGACAGA
CTGCTTCACTCGACCAGGATCTGTCCAGCTTGTCCACAAGGATAGGGACC
AGCTCCTGAAGGACTATGAGAAGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10351:1091..1216-

>mRNA_D-mesarthrocarpus_Contig10351.2.1 ID=mRNA_D-mesarthrocarpus_Contig10351.2.1|Name=mRNA_D-mesarthrocarpus_Contig10351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=117bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10351:1091..1216- (Discosporangium mesarthrocarpum MT17_79)
ATGTCGATACAGCCTGGTTCACTCCTTCAGAAGACGACAGACTGCTTCAC
TCGACCAGGATCTGTCCAGCTTGTCCACAAGGATAGGGACCAGCTCCTGA
AGGACTATGAGAAGTGA
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