mRNA_D-mesarthrocarpus_Contig1035.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1035.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig1035.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1035.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1035contigD-mesarthrocarpus_Contig1035:20239..21368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size305
Hectar predicted targeting categoryother localisation
Exons2
Cds size303
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789174.6066897-CDS-D-mesarthrocarpus_Contig1035:20238..203911680789174.6066897-CDS-D-mesarthrocarpus_Contig1035:20238..20391Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1035 20239..20391 +
1680789174.6168783-CDS-D-mesarthrocarpus_Contig1035:21218..213681680789174.6168783-CDS-D-mesarthrocarpus_Contig1035:21218..21368Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1035 21219..21368 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1035.5.1prot_D-mesarthrocarpus_Contig1035.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1035 20239..21368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1035.5.1

>prot_D-mesarthrocarpus_Contig1035.5.1 ID=prot_D-mesarthrocarpus_Contig1035.5.1|Name=mRNA_D-mesarthrocarpus_Contig1035.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
TRDQISDGSEEDDDHCVYCFQFSLDTAQYCMGRDAMPRGVEVDLARLGYH
QVQTYAAHRHHQQPGDPSMSSSPSASASSPLAAVPQQSTRLTSWFHVSPS
P
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mRNA from alignment at D-mesarthrocarpus_Contig1035:20239..21368+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1035.5.1 ID=mRNA_D-mesarthrocarpus_Contig1035.5.1|Name=mRNA_D-mesarthrocarpus_Contig1035.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1130bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1035:20239..21368+ (Discosporangium mesarthrocarpum MT17_79)
ACGAGGGACCAGATTTCCGATGGAAGTGAGGAGGATGATGATCATTGCGT
GTACTGCTTCCAATTCTCTCTGGATACGGCACAGTATTGCATGGGTCGCG
ATGCAATGCCAAGGGGTGTCGAGGTGGACCTTGCACGTCTGGGCTACCAC
CAGGTGAGAGCCAAGAGCCAGGAATGTTCGTCGCAGGATATCTGTGCTCG
TGTTTACACGTTCCATGGCACATCGATTGAGCGTTCCGATAGCCACCTCG
ATGTAATACTACGGTCCCTGTGACGTGAATGATGTTTTCTGCAAGTCTCG
ATTGGGCACTGAGCATGCCACAATCAAGGAAGAAGATACAATGCCCCCAT
CAACACTTTCGAAACAAGATCCCCGGAAGGATACCTCCTTAAGCGACAGC
CCCGCAAGACAAGGGGGGAGGAACAGGCCTTGATTGAACAATGCCTGTCG
TCGCCCCCTGAACCTCTGAGTCATTCAGAGCCCGACTATGGCCGAATCCA
TTCATCATTTTGTCACTCCTACTTCACCTCATCCACTGCTCCGCGGGTTC
CTTCCTACCAGCACCGCCCTTATCTACATATCAACCACCAGATGATCCTT
TCCCCCACCCTTGACACACAATAAGCCTACTACTAGGCCCATCACTGCAT
GTTTACCACGCCCACCCTGCACATGCCTCCCCACCACCAGGTTTACCATC
TCCTTGCCATCCGCGTGTACACTCTACCACATAAGGTCGCACCAACCGAT
TTAGTCCCCCCCTACCCCCACTGTTCCCACTGGACCTGCTCCAAAGTATC
GAAAATTGCTAGAAGTAACTATGAAGTGTAGAGCCCGCTCTATTTCCAAC
ACATACCCGAGAGAGAGACTTCGGGTTAGGGATAGGGTTAGGGATAGGGT
TAGGGATAGGGTTAGGGAGACAGAGGGAGAGACTGGAAGCTCTCAATTCA
CTGCTGCCACCACGGCCCCCACTCCCAAAGGTGCAAACCTACGCTGCTCA
TCGTCATCATCAGCAGCCGGGGGACCCTTCCATGTCTTCATCCCCATCTG
CATCCGCATCCTCTCCCCTGGCGGCTGTCCCGCAGCAGTCCACACGGCTC
ACCTCGTGGTTCCACGTGAGCCCCAGCCCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1035:20239..21368+

>mRNA_D-mesarthrocarpus_Contig1035.5.1 ID=mRNA_D-mesarthrocarpus_Contig1035.5.1|Name=mRNA_D-mesarthrocarpus_Contig1035.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1035:20239..21368+ (Discosporangium mesarthrocarpum MT17_79)
ACGAGGGACCAGATTTCCGATGGAAGTGAGGAGGATGATGATCATTGCGT
GTACTGCTTCCAATTCTCTCTGGATACGGCACAGTATTGCATGGGTCGCG
ATGCAATGCCAAGGGGTGTCGAGGTGGACCTTGCACGTCTGGGCTACCAC
CAGGTGCAAACCTACGCTGCTCATCGTCATCATCAGCAGCCGGGGGACCC
TTCCATGTCTTCATCCCCATCTGCATCCGCATCCTCTCCCCTGGCGGCTG
TCCCGCAGCAGTCCACACGGCTCACCTCGTGGTTCCACGTGAGCCCCAGC
CCC
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