mRNA_D-mesarthrocarpus_Contig10345.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A3D2BUD7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BUD7_9PROT) HSP 1 Score: 187 bits (475), Expect = 1.160e-57 Identity = 99/130 (76.15%), Postives = 109/130 (83.85%), Query Frame = 1 Query: 136 RTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGRPPAAFSAGSTMPASPAGAVESVP 525
R A GFAQFPDIAVPAGAKMDVERSLVLGARD+WIGRLSMN+ S SYDFFLREMPK+ WQEITTVRSE SVLTY R+NR+ATIQI KTLGGS +D+TVSPRGRP A SA MPA+P+G VE+ P
Sbjct: 45 RAAAGFAQFPDIAVPAGAKMDVERSLVLGARDNWIGRLSMNSGLDPSASYDFFLREMPKYRWQEITTVRSETSVLTYRRDNRIATIQITRKTLGGSWIDVTVSPRGRPQAPSSA---MPAAPSGTVETAP 171
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A2S6Q7H5_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6Q7H5_9PROT) HSP 1 Score: 174 bits (440), Expect = 1.840e-52 Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 1 Query: 79 CTSGDGSVSTATTSTGNASRTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGRPP 462
C G + S++ T++ +RTAVGFAQF DIAVPAGA MDVERSLVLG RD+WIGRLSM+T S +YDFFL+EMPK+ WQEITTVRSE SVLTYSRENR+ATIQI +TLGGS +D+TVSPRGR P
Sbjct: 27 CVPGSATTSSSGTTSTPTARTAVGFAQFSDIAVPAGATMDVERSLVLGTRDEWIGRLSMSTGQGPSITYDFFLQEMPKYRWQEITTVRSETSVLTYSRENRIATIQITKRTLGGSKIDVTVSPRGRVP 154
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A2E6GL04_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GL04_9PROT) HSP 1 Score: 130 bits (328), Expect = 2.580e-35 Identity = 75/143 (52.45%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 37 RALLVGGALLLA-AGCTSGDG-SVSTATTSTGNASRTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGRP 459
++ G L+L+ AGC S S S + TS G A + F QF D+ VP+GA MD+ERSLVLG ++ WIGRL M+ ++S+SYDFF EMP+F W +TTVR+E SVL+Y+R RVATIQI+ KTLGGS + + VSP+G P
Sbjct: 21 KSTFCAGVLILSLAGCQSTTPLSASRSATSVGAAEAS---FVQFSDVPVPSGASMDLERSLVLGEKEVWIGRLVMDVGLNSSKSYDFFFAEMPRFNWVPVTTVRAETSVLSYTRGERVATIQIKKKTLGGSNISLIVSPKGSP 160
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A7V2AKZ0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AKZ0_9PROT) HSP 1 Score: 124 bits (312), Expect = 1.810e-33 Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 1 Query: 151 FAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRG 453
F +FPD+ +P A + ++++L+ GA +DWIGRL ++TS S ++ +DF+ REMP F WQEIT+VRS++SV+TY+R RVATIQI +TL G+AV ITVSPRG
Sbjct: 20 FTRFPDLPMPVSADLQMDKTLIFGANEDWIGRLVIHTSHSANDMFDFYKREMPGFEWQEITSVRSKISVMTYTRRGRVATIQIEGRTLRGAAVTITVSPRG 120
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: E7C697_9BACT (Uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_39O04 TaxID=723590 RepID=E7C697_9BACT) HSP 1 Score: 125 bits (313), Expect = 2.040e-33 Identity = 67/131 (51.15%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 61 LLLAAGCTSGDGSVSTATTSTGNASRTA-VGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPR 450
L+ GC SG G V + G++S++A F+QF D+ +P GA+MD++R+++LGAR+ WIGRL++ TS ++ + ++FF ++ P+FGWQEIT++RS SVLTYS+ NRV TIQI +KTL GS V +TVSPR
Sbjct: 16 LIFLGGCESGMG-VKPMPMNKGDSSKSAQASFSQFQDVPIPIGAEMDLDRTVILGARESWIGRLTLETSHNSVKLFNFFKQKTPEFGWQEITSIRSATSVLTYSQTNRVLTIQIIAKTLQGSEVVMTVSPR 145
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: W6KNX0_MAGSQ (Uncharacterized protein n=2 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KNX0_MAGSQ) HSP 1 Score: 124 bits (310), Expect = 9.720e-33 Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 40 ALLVGGALLLAAGCTSGDGSVSTATTSTGNASRTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPR 450
ALL G +L TSG S + T +A++T F QFPDI VP A MD+ER+L+ G W GRL M++ + S ++DF+ +EMP FGWQ +T VRS SVLTY+R+ RVATIQI TL GS + ITVSP+
Sbjct: 17 ALLTGSLILSGCAVTSGVSSNKSTPTDGKSATKTQKSFNQFPDIPVPTRANMDIERTLIFGMEGGWYGRLVMSSGHNVSATFDFYQQEMPGFGWQPVTMVRSAHSVLTYTRQGRVATIQIGEATLSGSEISITVSPK 153
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A7C9GI09_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9GI09_9PROT) HSP 1 Score: 123 bits (308), Expect = 1.230e-32 Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 151 FAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGRP-PAAFSA 477
AQF DI +P GA MD+ERSL+ G D WIGRL TS ST ++++F+ REMP FGWQE+T VR+ ++++TY R R ATIQI +TLGG+ V++TVSP+ +P PAA A
Sbjct: 35 LAQFNDIPIPRGAAMDLERSLIFGPGDGWIGRLVFTTSLSTQDAFEFYGREMPAFGWQEVTRVRARINIMTYLRSARAATIQIEHRTLGGAEVNVTVSPQAQPAPAARGA 144
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A3C2DZ31_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3C2DZ31_9PROT) HSP 1 Score: 121 bits (304), Expect = 6.030e-32 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 151 FAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPR 450
F QF D+ +P ++MD+ER+ +LG ++ WIGRL +N+ S E +DFF EMPKF WQEI VRSEV++LTYSR R+A++QI+S TL GS VD+ VSPR
Sbjct: 51 FGQFSDVPIPTNSEMDLERTFILGKQESWIGRLVINSGHSAMEIFDFFRNEMPKFDWQEIAVVRSEVNILTYSRGERIASLQIKSNTLIGSVVDMVVSPR 150
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A1Z9J7V7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J7V7_9PROT) HSP 1 Score: 121 bits (304), Expect = 6.210e-32 Identity = 65/145 (44.83%), Postives = 98/145 (67.59%), Query Frame = 1 Query: 22 KTKLPRALLVGGALLLAAGCTSGDGSVSTATTSTGNASRTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGR 456
+T L +L L+L+A C+ G T T+ST ++ FAQF DI +P GA+M+++R+++LGA WIGRL++N + + + +DFF + +FGWQE+TTVR+ S +T++R NRV IQI +KTL GS VD+T+SPRG+
Sbjct: 4 RTLLTPTILPALILVLSA-CSQSVGLAPTPTSSTASSQANQPSFAQFQDIPIPPGARMNLDRTVILGAPASWIGRLALNANQNPAVVFDFFKQRTSEFGWQEVTTVRAATSFMTFTRANRVLNIQINAKTLQGSEVDLTISPRGQ 147
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Match: A0A522VH66_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A522VH66_9PROT) HSP 1 Score: 120 bits (300), Expect = 3.490e-31 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 22 KTKLPRALLVGGALLLAAGCTSGDGSVSTATTSTGNASRTAVGFAQFPDIAVPAGAKMDVERSLVLGARDDWIGRLSMNTSGSTSESYDFFLREMPKFGWQEITTVRSEVSVLTYSRENRVATIQIRSKTLGGSAVDITVSPRGRPPAAFSAGSTM 489
K KL A+L LLL A CTS S ++ A F F DI P+ A MD++R+LVLGA D W+GRL+ ++ S +E +DF+ +EMP++GW+E+T+VRS VSVLTY R RVAT+QIR+ TL GS V+ TVSP+G GS+M
Sbjct: 8 KGKLGGAVLTA-CLLLVAACTS----PSLTPSARSENESIAPHFGDFTDIPRPSNATMDLDRTLVLGAADTWVGRLAFSSRLSPTEMFDFYKQEMPRYGWEEVTSVRSTVSVLTYKRMERVATMQIRAGTLIGSYVEFTVSPQGTSAGYTPGGSSM 158 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10345.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10345.2.1 >prot_D-mesarthrocarpus_Contig10345.2.1 ID=prot_D-mesarthrocarpus_Contig10345.2.1|Name=mRNA_D-mesarthrocarpus_Contig10345.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=178bp MNRIAFYKTKLPRALLVGGALLLAAGCTSGDGSVSTATTSTGNASRTAVGback to top mRNA from alignment at D-mesarthrocarpus_Contig10345:950..1483+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10345.2.1 ID=mRNA_D-mesarthrocarpus_Contig10345.2.1|Name=mRNA_D-mesarthrocarpus_Contig10345.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10345:950..1483+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10345:950..1483+ >mRNA_D-mesarthrocarpus_Contig10345.2.1 ID=mRNA_D-mesarthrocarpus_Contig10345.2.1|Name=mRNA_D-mesarthrocarpus_Contig10345.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10345:950..1483+ (Discosporangium mesarthrocarpum MT17_79)back to top |