mRNA_D-mesarthrocarpus_Contig1034.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A6H5KCB3_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCB3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 7.530e-40 Identity = 74/107 (69.16%), Postives = 84/107 (78.50%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAA--TQAGAAVGAPRR 425
MSWFG +EP P+GPS +DLAKQE++MYSDLF KMS LCFKKCVVKM GE+DL VGEM+CVDRCV+KYME QEKVGVILK+AEE + AQ A AG G P R
Sbjct: 1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQGGAGGPAAGGVPGVPGR 107
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A6U1NEZ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NEZ7_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.530e-25 Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQ 377
MS FG PAA +GPS +D+AK EMEMY+DLF M+ +CFKKC EA+L VGEM+CVDRC KY+E +KVG +LK+ EE M+AQ
Sbjct: 1 MSLFGGGAPAA-SGPSALDVAKAEMEMYTDLFNNMATICFKKCAASKIKEAELNVGEMSCVDRCTGKYIEAHQKVGEVLKRVEEQMKAQ 88
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A448YV82_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV82_9STRA) HSP 1 Score: 107 bits (266), Expect = 7.690e-25 Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAATQ 395
M++FG E A PAGP V AK EMEMY+DLF K+++ CF KC + E DL++GEMTC DRCV+KY+E QE++GV+L+KA E QAQ AA Q
Sbjct: 1 MNFFGGGEEAKPAGPDPVFAAKTEMEMYTDLFNKIASTCFSKCASRKHKEPDLSLGEMTCADRCVSKYLEGQERIGVVLQKANEE-QAQQMAAQQ 94
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A7S0Y8N1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8N1_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.340e-23 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAATQ 395
M++FG E A P GP V AK EMEMY+DLF K+++ CF KCV + E DL++GEMTC DRCV+KY+E Q+ VGV+L+KA E QA AA Q
Sbjct: 1 MNFFG-GEEAQPQGPDPVFAAKTEMEMYTDLFNKIASTCFSKCVNRKHKEPDLSLGEMTCTDRCVSKYLEGQQIVGVVLQKANEAQVQQAAAAQQ 94
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A1E7FWV3_9STRA (Mitochondrial import inner membrane translocase subunit tim10 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWV3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.480e-22 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 114 SWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAATQ 395
++FG E P GP V AK EMEMY+DLF K+++ CF+KC + E DL++GEMTC DRCV+KY+E Q+ +GV+L+KA E QAQ QAA Q
Sbjct: 3 NFFGGGEEQKPQGPDPVFAAKTEMEMYTDLFNKIASECFQKCASRKHKEPDLSLGEMTCTDRCVSKYLEGQQLIGVVLQKANE-QQAQQQAAMQ 95
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A7R9W455_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W455_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.840e-22 Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 111 MSWFGTNEPAA-PAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQA-----ATQAGAAVG 413
M++FG E AA P GP + A EMEMY+DLF ++S+ CF KC + + DL +GEM+C DRCV KYME+ EKVGVIL+KA E AQA++ A AGA G
Sbjct: 25 MNFFGQKEAAAQPTGPDPLFAATAEMEMYADLFQRISSTCFSKCASRRHRDGDLALGEMSCTDRCVGKYMESMEKVGVILQKANEAQAAQAKSVQDMQAAWAGAGAG 131
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A7S2HYG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYG5_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.010e-22 Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 75 VVLLLSFLPRSWMSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQ 383
V+L L+ + FGT E PAGP + A EMEMY+DLF KM++ CF+KC K ++DL +GEM+C DRCVAKY+E QEK+GVI++KA E AQ Q
Sbjct: 35 VILSLTRYILIMNALFGTEEKQ-PAGPEPLFAATTEMEMYTDLFNKMASSCFQKCASKKHKDSDLALGEMSCTDRCVAKYLEAQEKIGVIIQKANEAQAAQQQ 136
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A7S0GCN6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCN6_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.670e-22 Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQ 383
M +FG E PAGP + A EMEMY+DLF KMS CF+KC + +L +GEM CVDRCVAKY+ETQEKVG++L+KA E AQ Q
Sbjct: 1 MGFFGQEEK--PAGPDPMFAATTEMEMYTDLFNKMSASCFEKCASTRHKDDELALGEMGCVDRCVAKYLETQEKVGIVLQKANEAQAAQQQ 89
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A6T5YYM4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5YYM4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.060e-21 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAATQAGAAVG 413
MS+FG + A P GP + A+ EMEMY+DLF K++ CF+KC E D+++GEM+C DRCVAKY+E+QE+VG IL+KA E AQ QA +A+G
Sbjct: 1 MSFFGGGQ-AQPQGPDPMFAAQTEMEMYTDLFNKIARSCFQKCASTRHREPDISLGEMSCTDRCVAKYLESQERVGKILQKANESQAAQQQAMQDMQSAMG 100
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Match: A0A6U0JD31_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JD31_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.520e-21 Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 111 MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEADLTVGEMTCVDRCVAKYMETQEKVGVILKKAEEGMQAQAQAATQ 395
M++FG E A P GP + A EMEMY+DLF K+S CF+KC + + DL +GEM C DRCV+KYME EKVGV+L+KA E QAQ QA Q
Sbjct: 1 MNFFGGGE-AQPQGPDPLFAATSEMEMYADLFQKISGTCFEKCASRRHRDGDLALGEMACTDRCVSKYMEAMEKVGVVLQKANE-QQAQQQANLQ 93 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1034.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1034.5.1 >prot_D-mesarthrocarpus_Contig1034.5.1 ID=prot_D-mesarthrocarpus_Contig1034.5.1|Name=mRNA_D-mesarthrocarpus_Contig1034.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp MSWFGTNEPAAPAGPSTVDLAKQEMEMYSDLFAKMSNLCFKKCVVKMAGEback to top mRNA from alignment at D-mesarthrocarpus_Contig1034:18016..19559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1034.5.1 ID=mRNA_D-mesarthrocarpus_Contig1034.5.1|Name=mRNA_D-mesarthrocarpus_Contig1034.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1544bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:18016..19559+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1034:18016..19559+ >mRNA_D-mesarthrocarpus_Contig1034.5.1 ID=mRNA_D-mesarthrocarpus_Contig1034.5.1|Name=mRNA_D-mesarthrocarpus_Contig1034.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1034:18016..19559+ (Discosporangium mesarthrocarpum MT17_79)back to top |