mRNA_D-mesarthrocarpus_Contig10339.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10339.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10339.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10339.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10339contigD-mesarthrocarpus_Contig10339:1396..4044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size617
Hectar predicted targeting categoryother localisation
Exons3
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-23_000170.1
Cds size615
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789173.9638436-CDS-D-mesarthrocarpus_Contig10339:1395..14821680789173.9638436-CDS-D-mesarthrocarpus_Contig10339:1395..1482Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10339 1396..1482 -
1680789173.9767623-CDS-D-mesarthrocarpus_Contig10339:2378..26511680789173.9767623-CDS-D-mesarthrocarpus_Contig10339:2378..2651Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10339 2379..2651 -
1680789173.988006-CDS-D-mesarthrocarpus_Contig10339:3789..40441680789173.988006-CDS-D-mesarthrocarpus_Contig10339:3789..4044Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10339 3790..4044 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10339.1.1prot_D-mesarthrocarpus_Contig10339.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10339 1396..4044 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10339.1.1

>prot_D-mesarthrocarpus_Contig10339.1.1 ID=prot_D-mesarthrocarpus_Contig10339.1.1|Name=mRNA_D-mesarthrocarpus_Contig10339.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=205bp
GPGSAGNRGTGVGDAGDITRRPEALALGEEEVKEVGTPMRAVLDLLQKWQ
AVVERVRATEVPLSAQVVGGDGSSEEVFRREHRRRQRKALEIVDMSSSSE
DEQPLGRTASTGAGAGAGARRRGFRGWEGRRFSQQQQQQGQQREPQGLVR
WGSDPMPQTPYDKPLVLSSLGTAPDKVVAVVHDNLLPLGSGGGTGTRSAA
ATIPG
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mRNA from alignment at D-mesarthrocarpus_Contig10339:1396..4044-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10339.1.1 ID=mRNA_D-mesarthrocarpus_Contig10339.1.1|Name=mRNA_D-mesarthrocarpus_Contig10339.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2649bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10339:1396..4044- (Discosporangium mesarthrocarpum MT17_79)
GGGCCCGGTTCTGCAGGGAATAGAGGCACAGGGGTAGGTGACGCTGGAGA
CATAACGAGGAGACCAGAGGCACTGGCACTCGGTGAGGAAGAGGTCAAGG
AGGTGGGGACACCCATGAGGGCTGTGCTGGATCTGCTGCAGAAATGGCAG
GCGGTGGTGGAGAGGGTGAGGGCGACGGAGGTCCCACTGTCGGCACAGGT
GGTTGGGGGGGACGGGAGCTCGGAGGAGGTTTTTCGGAGGGAGCACAGAC
GGCGGGTGAGTATATAGTGTGACTGAGTGAGAGAGAGCTAGAGAGAAAAG
GGCTGGGGGAGAGAAGGACAGGCAGATGGGTGATAATAGCTTCTTGTGGG
CCCCCCCTACACGGTATATAGCTCTCTACAGCTCTACATGGGGACACCAT
GTGCTATGGAATTCCTCTGTAAGACAGCTCTATACAGCATAGCTCTGGTT
GGCCTAACTCTACACAGGGACACAGCGCATAAGATGGCCCAGGCGTATGG
GGGGGGGAGGGGCACGGGTAATCCCATCAATCATTTGGCAGTTTCTTGGC
CAGCTTTGGCCAGTTTTCTCCCGTTTTTCCCTCTTTCCTTTTGTCATTTT
TTCTAGGTAGAAGAGGGGGTACTGGACCAGGGCGTGAGGGTGGCAGCGAC
CGGGGCTTGTGTGGGCTGGGACATGTGATCAAAGGCCTCACGGTACAGAT
ATTTTTCTCTCTCAGTTCTGTGACTGAATACTCTCCCCCCTAACCCTAAG
CCTAGCCCTGACTTTGATTTACTACAGAACTCAAGGTATCTCTGACGCTC
TAGTGTACAACAAGACTTTTTGTTCTTGATGCCATCACAACCCCCTGGGT
CCAGATCCCCTCCTCCCCACACCCCCACTCCCCCAGCACCCCCAAGTGTG
TATCCCCCAAACCAGACCCTGCCCACCTGACTTCAACCCCCCTTCCTCTT
CCTACTCCCCCACCCCCACCCCTTGCATTGATGCTAACCCTAACCCTAAC
CCTAACCCAAACCCTAACCCTGAACGTAATCCCCGCTCGCTACATCACAC
CCTGCCCACCCCACACACCCATCCTGTAGTGATAATGATTCTAAGAATTA
ATAGTATGTGTAAATGATAGTACTGCGAAGGACGATAATATGATGATGAT
TCTAAGAATTAATAGTGTATGTAAATGATAGTACTGCGAAGGACGATAAT
AATGATAGTGATTCTAAGAATTAATAGTGGTAATGTATGTAATGATCGTC
CTGTGAAGGATGATAAAAGTGATAATGATATAATAATGATATTGAATAGT
ATCATACATACTACACTGCACTACCTGATAGTAATGATACCATCTTTATT
TTAAACAATACTAATTAAGCAATACTAATTATCCCGACAGCAGCAGCGTA
AGGCCCTGGAGATCGTGGACATGTCCTCTTCCTCGGAAGATGAGCAGCCA
TTGGGCCGTACAGCCAGCACTGGGGCAGGGGCAGGGGCAGGGGCAAGAAG
GAGAGGATTTCGTGGCTGGGAGGGCAGAAGGTTCTCACAGCAGCAGCAGC
AGCAGGGGCAGCAGCGCGAACCACAAGGGCTTGTTCGTTGGGGTTCGGAC
CCCATGCCACAGACCCCCTACGATAAACCCCTTGTCTTGTCCAGCCTTGG
GACTGCTCCAGATAAGGCAAGGGTTATAGCCAAGGATGTGGGGCTGGGTG
GTTAGGGCTAGGATTAGACTCAAGCCTCAGGAATGCCCCGGTTTCGAGGG
TAGGTTGGGTTTATGTTCAGAGTTGAGGTTGGTGTTCTTGTGTCGGGTTA
GGGATAGGGTTAAGGTTAGGGTTATTGTGCTTGGCTAGAATGGGGAAAGA
AAGAATGGGGGGAAGGGGCTTCTGGCTGTGCTGGACGGAAGACGAGGAAA
GACCGTGGGATGGGTGGATGGATGTGCTTCTTTAATGTGCTTATTTATTG
TGCTTATTTAATGTGCTTATTTAATGTTCTTATTTAGAGAAAGATGAGAG
GTGCCAGCGCCAAGTACTGTGCAGATCCTACCCACAAGAGGGACAGGGAT
AGAGGTTTTCGAATGTGATTGAAATAAGCAAAATATACTAAGATACTGCT
TACGCAATACTTGTACAATCTCAAGAGAAGAGCTCTCTGAGTACTCTGCA
AGAATTGCGGCAGTCAGGGCTGCTGTGGAGAACACTCCCCCACCCTCTCC
CTTCACTCTCCTTTCTGCTCTTCCGCTTTGAGCCACATCAAGTCAGGTCT
TGCGTGACATGTGCCGTTGATTCTAGCTGTAACCCAACCCTAACCCTAAT
CCTATCCCTTGGGCATGACATGCGCTGGTGATTCTACATTAGCTGCAACC
CTTGTCCTAACCCCAACCCCGGACCCCAAACCCTAACCCTGATGTAGCTG
ACGCAAACCAAACCCTAACCCTAACCCTAGCCCTAACCTCAACCAGTAAC
TGCCATATACGCATGCATGTGGCGAGCCAGAGTGCAGACCACCGCCTGTC
CACCCCCCACCCATCTGCTGATGGCCATTTGTGATCACCATCGCCATTGT
CTGCATTGCCAGGTGGTTGCAGTGGTACATGATAACCTTCTTCCCCTGGG
GTCAGGGGGAGGCACGGGGACGAGGAGCGCAGCAGCAACAATCCCGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10339:1396..4044-

>mRNA_D-mesarthrocarpus_Contig10339.1.1 ID=mRNA_D-mesarthrocarpus_Contig10339.1.1|Name=mRNA_D-mesarthrocarpus_Contig10339.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=615bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10339:1396..4044- (Discosporangium mesarthrocarpum MT17_79)
GGGCCCGGTTCTGCAGGGAATAGAGGCACAGGGGTAGGTGACGCTGGAGA
CATAACGAGGAGACCAGAGGCACTGGCACTCGGTGAGGAAGAGGTCAAGG
AGGTGGGGACACCCATGAGGGCTGTGCTGGATCTGCTGCAGAAATGGCAG
GCGGTGGTGGAGAGGGTGAGGGCGACGGAGGTCCCACTGTCGGCACAGGT
GGTTGGGGGGGACGGGAGCTCGGAGGAGGTTTTTCGGAGGGAGCACAGAC
GGCGGCAGCGTAAGGCCCTGGAGATCGTGGACATGTCCTCTTCCTCGGAA
GATGAGCAGCCATTGGGCCGTACAGCCAGCACTGGGGCAGGGGCAGGGGC
AGGGGCAAGAAGGAGAGGATTTCGTGGCTGGGAGGGCAGAAGGTTCTCAC
AGCAGCAGCAGCAGCAGGGGCAGCAGCGCGAACCACAAGGGCTTGTTCGT
TGGGGTTCGGACCCCATGCCACAGACCCCCTACGATAAACCCCTTGTCTT
GTCCAGCCTTGGGACTGCTCCAGATAAGGTGGTTGCAGTGGTACATGATA
ACCTTCTTCCCCTGGGGTCAGGGGGAGGCACGGGGACGAGGAGCGCAGCA
GCAACAATCCCGGGG
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