mRNA_D-mesarthrocarpus_Contig10334.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A6H5KHC7_9PHAE (Valine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC7_9PHAE) HSP 1 Score: 152 bits (384), Expect = 6.940e-45 Identity = 69/83 (83.13%), Postives = 78/83 (93.98%), Query Frame = 1 Query: 1 PEDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 P D+KF+MVIPPPNVTGSLHLGHALT AV+DTL RWHRM GHATLYVPGTDHAGIATQSVVEK+LKK+EN++RH+LGRE FV+ Sbjct: 2 PADKKFIMVIPPPNVTGSLHLGHALTAAVEDTLCRWHRMLGHATLYVPGTDHAGIATQSVVEKKLKKDENVTRHELGREEFVD 84
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A7S4J4T0_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4T0_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.780e-42 Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 1 Query: 4 EDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 +D+KFVMVIPPPNVTGSLHLGHALT AV+DTLTRWHRM GHA+LYVPGTDHAGIATQSVVEK L KEEN +RHDLGRE F+E Sbjct: 115 DDEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHASLYVPGTDHAGIATQSVVEKMLMKEENKNRHDLGREKFIE 196
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A7R9Z5N7_9STRA (Valine--tRNA ligase (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z5N7_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.170e-42 Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 4 EDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 E++KFVMVIPPPNVTGSLHLGHALT AV+DTLTRWHRM GHA+LYVPGTDHAGIATQSVVEK L KE N +RHDLGR FVE Sbjct: 11 EEEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHASLYVPGTDHAGIATQSVVEKMLMKESNQNRHDLGRSKFVE 92
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: D8LT18_ECTSI (Valine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT18_ECTSI) HSP 1 Score: 153 bits (387), Expect = 1.720e-41 Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 1 PEDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFV 246 P D+KF+MVIPPPNVTGSLHLGHALT AV+DTL RWHRM GHATLYVPGTDHAGIATQSVVEK+LKK+EN++RHDLGRE FV Sbjct: 156 PADKKFIMVIPPPNVTGSLHLGHALTAAVEDTLCRWHRMLGHATLYVPGTDHAGIATQSVVEKKLKKDENVTRHDLGREEFV 237
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A2P4YF83_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF83_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.730e-41 Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 7 DQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 D++FVMVIPPPNVTGSLHLGHALT A+QD LTRWHRM GHATL+VPGTDHAGIATQSVVEKRL KEEN SRHDLGR+ F+E Sbjct: 106 DERFVMVIPPPNVTGSLHLGHALTVAIQDALTRWHRMLGHATLWVPGTDHAGIATQSVVEKRLLKEENKSRHDLGRDQFLE 186
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A418FR92_9STRA (Valine--tRNA ligase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FR92_9STRA) HSP 1 Score: 145 bits (366), Expect = 7.820e-41 Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 4 EDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFV 246 +D++FVMVIPPPNVTGSLHLGHALT AVQDTLTRWHRM GHATL+VPGTDHAGIATQSVVEKRL K+E SRHDLGRE F+ Sbjct: 131 KDKRFVMVIPPPNVTGSLHLGHALTVAVQDTLTRWHRMLGHATLWVPGTDHAGIATQSVVEKRLMKDEGKSRHDLGREPFL 211
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A7S2P8Y8_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P8Y8_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.330e-40 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 4 EDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFV 246 +D+KFVMVIPPPNVTGSLHLGHALT AV+DTLTRWHRM GH+TLYVPGTDHAGIATQSVVEK L KE +RHDLGRE F+ Sbjct: 142 DDEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMLGHSTLYVPGTDHAGIATQSVVEKMLMKETKQTRHDLGREEFI 222
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A1V9ZJT7_9STRA (Valine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJT7_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.070e-40 Identity = 71/83 (85.54%), Postives = 79/83 (95.18%), Query Frame = 1 Query: 1 PEDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 P+D++FVMVIPPPNVTGSLHLGHALT AVQDTLTRWHRM GHATL+VPGTDHAGIATQSVVEKRL K+E+ SRHDLGRE+F+E Sbjct: 142 PKDKRFVMVIPPPNVTGSLHLGHALTVAVQDTLTRWHRMLGHATLWVPGTDHAGIATQSVVEKRLMKDESKSRHDLGREAFLE 224
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A1E7FFS5_9STRA (Valine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFS5_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.810e-40 Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 1 Query: 1 PEDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFV 246 P+D+KF+MVIPPPNVTGSLHLGHALT AV+DTLTRWHRM GHATLYVPGTDHAGIATQSVVEK+L K EN +RHDLGRE F+ Sbjct: 126 PDDEKFIMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHATLYVPGTDHAGIATQSVVEKQLLKNENKTRHDLGREEFI 207
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Match: A0A1V9Z1Z1_9STRA (Valine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z1Z1_9STRA) HSP 1 Score: 149 bits (375), Expect = 7.130e-40 Identity = 70/83 (84.34%), Postives = 78/83 (93.98%), Query Frame = 1 Query: 1 PEDQKFVMVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATQSVVEKRLKKEENISRHDLGRESFVE 249 P+D++FVMVIPPPNVTGSLHLGHALT AVQDTLTRWHRM GHATL+VPGTDHAGIATQSVVEKRL K+E SRHDLGRE+F++ Sbjct: 112 PKDKRFVMVIPPPNVTGSLHLGHALTVAVQDTLTRWHRMLGHATLWVPGTDHAGIATQSVVEKRLMKDEGKSRHDLGREAFLD 194 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10334.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10334.1.1 >prot_D-mesarthrocarpus_Contig10334.1.1 ID=prot_D-mesarthrocarpus_Contig10334.1.1|Name=mRNA_D-mesarthrocarpus_Contig10334.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=76bp MVIPPPNVTGSLHLGHALTGAVQDTLTRWHRMCGHATLYVPGTDHAGIATback to top mRNA from alignment at D-mesarthrocarpus_Contig10334:885..1617+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10334.1.1 ID=mRNA_D-mesarthrocarpus_Contig10334.1.1|Name=mRNA_D-mesarthrocarpus_Contig10334.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=733bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10334:885..1617+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10334:885..1617+ >mRNA_D-mesarthrocarpus_Contig10334.1.1 ID=mRNA_D-mesarthrocarpus_Contig10334.1.1|Name=mRNA_D-mesarthrocarpus_Contig10334.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=228bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10334:885..1617+ (Discosporangium mesarthrocarpum MT17_79)back to top |