mRNA_D-mesarthrocarpus_Contig10327.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2D7FL90_9PROT (Short chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FL90_9PROT) HSP 1 Score: 417 bits (1072), Expect = 6.700e-146 Identity = 207/257 (80.54%), Postives = 222/257 (86.38%), Query Frame = 1 Query: 1 MTETSTGHALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPPVTE 771 M +T HALVTGA+KRIG IA ALA DGWTVGIH+R S D+ADTL LT+AG+RAY VAADL +DAD DRL EA A GGPITCLVNNASVFE+D+LE SR SWD+HMNVNLWAPIKLSQAL A LP+ TGNI+NI DQRVVNI PGFLSYTISKAGMWAMT+NLALALAPRVRVNAIGPGPTLPSPRQSQE FDRQ+ARVPLGHGAG EIADGVRYIL +PSLTGQMIALDGGQHLGWEFPEPG PP TE Sbjct: 1 MIDTPKRHALVTGAAKRIGGQIASALAADGWTVGIHYRQSTDEADTLHDQLTEAGNRAYVVAADLDEDADIDRLVTEAIAHGGPITCLVNNASVFEYDNLEAVSRASWDTHMNVNLWAPIKLSQALIANLPDSETGNIVNIVDQRVVNISPGFLSYTISKAGMWAMTQNLALALAPRVRVNAIGPGPTLPSPRQSQEHFDRQSARVPLGHGAGAGEIADGVRYILASPSLTGQMIALDGGQHLGWEFPEPGTPPTTE 257
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2D8PUC8_9PROT (Short chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUC8_9PROT) HSP 1 Score: 379 bits (972), Expect = 1.130e-130 Identity = 176/250 (70.40%), Postives = 210/250 (84.00%), Query Frame = 1 Query: 22 HALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPPVTE 771 HALVTGA++RIGRAIA ALA+DGWTVGIHH S +AD L + L ++GH+AY +AADL DD L +A GGP++CLVNNASVFE DS+ET SRDSWD HM+VNLWAP++LSQA AA LP+ TGNIINI DQRVV+IPP FLSYTISK+G+W+ T+ L+LALAPR+RVNAIGPGP LPSPRQSQ+QFDRQA R+PLGHGA PDEIA GV ++L+ PS+TGQM+ALDGGQHLGW+FP+P APP+ E Sbjct: 8 HALVTGAARRIGRAIATALAQDGWTVGIHHASSQAEADILAKELANSGHQAYPIAADLSDDPQAGSLVEKAVELGGPVSCLVNNASVFERDSVETVSRDSWDRHMDVNLWAPVRLSQAFAAALPDRMTGNIINIVDQRVVSIPPDFLSYTISKSGLWSATQGLSLALAPRIRVNAIGPGPVLPSPRQSQKQFDRQAERMPLGHGADPDEIARGVLFVLSTPSMTGQMVALDGGQHLGWDFPDPDAPPIEE 257
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A3D2BP11_9PROT (Short chain dehydrogenase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BP11_9PROT) HSP 1 Score: 353 bits (905), Expect = 1.710e-120 Identity = 173/257 (67.32%), Postives = 203/257 (78.99%), Query Frame = 1 Query: 1 MTETSTGHALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPPVTE 771 MT G+ L+TGA++RIGR IAIALA DGWTVGIH+ SPD A+ LC L +G AYT ADL D+ +L ++ AAA P+TCLVNNASVFE D LET +RDSWD HM VNLWAP++LSQA A LP+ GNI+NI DQRV NIPPGFLSYT+SKAG+WA+T++LAL+LAP +RVNAIGPGP LPSPRQS EQF RQAAR+PLG A EIADGV YIL+A S+TGQ+IALDGGQHLGW+FP+P APPV E Sbjct: 1 MTSKPKGNVLITGAAQRIGRGIAIALAADGWTVGIHYFQSPDRAEALCEELNSSGANAYTAGADLSDETSIGKL-MDRAAAYEPVTCLVNNASVFERDELETVTRDSWDIHMAVNLWAPLRLSQAFATTLPDGVPGNIVNIVDQRVENIPPGFLSYTVSKAGLWALTQSLALSLAPSIRVNAIGPGPVLPSPRQSAEQFARQAARMPLGQAAPVTEIADGVLYILSATSMTGQLIALDGGQHLGWDFPDPEAPPVLE 256
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2D8G2U3_9PROT (Short chain dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G2U3_9PROT) HSP 1 Score: 337 bits (865), Expect = 2.080e-114 Identity = 161/251 (64.14%), Postives = 198/251 (78.88%), Query Frame = 1 Query: 19 GHALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPPVTE 771 G+AL+TG ++RIG IA ALA DGWTVGIHH S A+ LC+ L AG AYTV ADL ++ L +E A+A P+TCL+NNASVFE+D L RDSWD HM+VNLWAP++LSQA +AGLP D +GNI+NI DQRV NI P FLSYTISKAG+W +T++LAL LAPR+RVNAIGPGP LPSPRQ+ +QF+ QA+R+P+GHGA EIADG+ YIL+A S+TGQ+I+LDGGQHLGW+FP+P AP V E Sbjct: 7 GNALITGGAQRIGATIASALAADGWTVGIHHXRSSIAAENLCKKLVSAGAEAYTVNADLSNEXGVATL-IEQASASTPVTCLINNASVFEYDELSNVDRDSWDLHMDVNLWAPLRLSQAFSAGLPNDISGNIVNIIDQRVENISPQFLSYTISKAGLWTLTKSLALTLAPRIRVNAIGPGPVLPSPRQTTKQFEAQASRMPMGHGAPASEIADGIFYILSATSMTGQLISLDGGQHLGWDFPDPXAPRVME 256
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2S6Q9A0_9PROT (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9A0_9PROT) HSP 1 Score: 315 bits (808), Expect = 9.640e-106 Identity = 155/257 (60.31%), Postives = 189/257 (73.54%), Query Frame = 1 Query: 1 MTETSTGHALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPPVTE 771 MT +S G+ L+TGA++RIG AIA A++ DGWTVGIH+ S A+ LC L + AY V ADL DD + + AA GP+TCL+NNAS+FE D L + +R SW +HMNVNLWAP+ LSQ AA LP GNI+NI DQRV I P FLSYTISK G+W +T++LAL LAP +RVNAIGPGP LPSPRQS EQF QA+R+PLG GA EIAD VRYIL+ S+TGQ+I LDGGQHLGW+ P+PG+PP+TE Sbjct: 1 MTISSKGNVLITGAAQRIGAAIASAMSADGWTVGIHYFQSSGAANALCDDLNNLNANAYVVGADLSDDRAVQGM-ISQAAVHGPVTCLINNASIFERDDLHSVTRASWQTHMNVNLWAPLCLSQTFAAALPIGAEGNIVNIVDQRVDKISPDFLSYTISKTGLWNLTQSLALTLAPSIRVNAIGPGPVLPSPRQSNEQFSLQASRMPLGQGAPVIEIADCVRYILSTTSMTGQLIFLDGGQHLGWDLPDPGSPPITE 256
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A6C1SRG6_9PROT (SDR family oxidoreductase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SRG6_9PROT) HSP 1 Score: 297 bits (760), Expect = 2.170e-98 Identity = 144/237 (60.76%), Postives = 177/237 (74.68%), Query Frame = 1 Query: 25 ALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGW 735 ALVTGA +RIGRAIA+ALA DGW V +H+ S +A + + +AG R+ V DLG DAD L AAA GP+TCL+NNASVFE D + T +R WD HM VNLWAP L+QAL + LP++ GN+INI DQRV N+ P F SYT+SKA +W +TR +ALALAPRVRVNA+GPGPTLPSPRQ++ QF RQ + +PL A P+EIAD VR++L+APSLTGQMIA+D GQHLGW Sbjct: 13 ALVTGAGRRIGRAIALALAGDGWKVAVHYNRSDAEARAVVEEIAEAGGRSVPVRGDLGVDADVAALIDRAAAEIGPLTCLINNASVFERDEVMTTTRAGWDRHMQVNLWAPFMLTQALVSQLPDEAGGNVINILDQRVWNLTPHFTSYTVSKAALWTLTRTMALALAPRVRVNAVGPGPTLPSPRQTEAQFARQWSGLPLARPASPEEIADAVRFLLDAPSLTGQMIAVDSGQHLGW 249
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A4R6WFX1_9PROT (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WFX1_9PROT) HSP 1 Score: 296 bits (758), Expect = 3.680e-98 Identity = 145/246 (58.94%), Postives = 178/246 (72.36%), Query Frame = 1 Query: 25 ALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAPP 762 ALVTG +KR+GR IA+ LA DGW + +H+ S D A+ + G RA+ + ADLG +A+ L AA A GP+ CLVNNASVFE D ++T +R+SWD H+ NL AP LSQALA LP D NIIN+ DQRV + P F+SYT++K G+W +TR +ALALAPR+RVNAIGPGPTLPSPRQS EQF QAA +PLGHGA P EIA+ V YIL +PS+TGQMIALDGG+HLGW+ P G P Sbjct: 8 ALVTGGAKRLGREIALKLAGDGWDIALHYHRSRDAAEATAAEIRALGRRAHLLQADLGIEAEVTPLIPAAAEALGPVNCLVNNASVFEMDKIDTVTRESWDRHLETNLRAPFVLSQALARHLPADGGANIINLLDQRVWKLTPYFMSYTVAKMGLWTLTRTMALALAPRIRVNAIGPGPTLPSPRQSDEQFAAQAAAMPLGHGATPGEIAEAVLYILRSPSMTGQMIALDGGEHLGWQVPNKGFQP 253
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A3M0XYG8_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XYG8_9PROT) HSP 1 Score: 293 bits (750), Expect = 1.000e-96 Identity = 150/243 (61.73%), Postives = 175/243 (72.02%), Query Frame = 1 Query: 25 ALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPG 753 ALVTGA++R+GRAIA+ LA GW V +H+R S DA + AG RA + ADL D+AD + L A AA GP+ CLVNNAS FE D++ETA+R+SWD H+ NL AP+ LSQA A LP G IIN+ DQRV N+ P FLSYT+SKAG+W +TR LALALAPR+RVN IGPGPTLPS RQS EQF RQ A +PLG G P EI VR+IL PSLTGQMIALDGGQHLGW P PG Sbjct: 25 ALVTGAARRVGRAIALDLARHGWAVAVHYRTSAADAAATVADIEAAGGRALALQADLADEADVETLVPRAVAALGPLGCLVNNASTFEMDTIETATRESWDRHIEPNLRAPLVLSQAFARALPMPDGGVIINLIDQRVWNLTPYFLSYTVSKAGLWTLTRTLALALAPRIRVNGIGPGPTLPSARQSDEQFARQCAAMPLGRGTSPAEICRAVRFILETPSLTGQMIALDGGQHLGWA-PAPG 266
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2E5PC47_9PROT (Short chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PC47_9PROT) HSP 1 Score: 292 bits (748), Expect = 1.300e-96 Identity = 143/240 (59.58%), Postives = 175/240 (72.92%), Query Frame = 1 Query: 25 ALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAAGGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFP 744 ALVTGA +RIGRAIA+ L E GW+V +HH S +A + AG RA +AADL D+AD L A A GP++CL+NNAS+FE+D +A+R+SWD+HM+VNL AP LSQ AA LP TG I+NI DQRV N+ P F+SYT+SK G+WA+T+ LALALAP +RVNAIGPGP LPS RQS+ QF Q PLGHGA P E++D VR+IL AP++TGQMIALDGGQHLGW P Sbjct: 11 ALVTGAGQRIGRAIALDLGEAGWSVAVHHNDSSAEASETVDMIEKAGGRAIALAADLSDEADASTLLDRTAKAMGPVSCLINNASLFEYDDATSATRESWDAHMSVNLRAPFILSQKFAADLPTGTTGAIVNILDQRVWNLTPYFMSYTVSKVGLWALTQTLALALAPAIRVNAIGPGPVLPSARQSELQFRAQCENTPLGHGASPHELSDAVRFILAAPAMTGQMIALDGGQHLGWAMP 250
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Match: A0A2L0ERM4_SORCE (Short-chain dehydrogenase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0ERM4_SORCE) HSP 1 Score: 291 bits (745), Expect = 3.590e-96 Identity = 145/246 (58.94%), Postives = 179/246 (72.76%), Query Frame = 1 Query: 25 ALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHLTDAGHRAYTVAADLGDDADTDRLAVEAAAA-GGPITCLVNNASVFEHDSLETASRDSWDSHMNVNLWAPIKLSQALAAGLPEDRTGNIINIADQRVVNIPPGFLSYTISKAGMWAMTRNLALALAPRVRVNAIGPGPTLPSPRQSQEQFDRQAARVPLGHGAGPDEIADGVRYILNAPSLTGQMIALDGGQHLGWEFPEPGAP 759 ALVTGA KRIGRAIA+ LA DGW V +H+ S +A+ + +T AG +A VAADL + +T L AA A G + CL+NNAS+FE D+ ETA+R SWD+HM VNL AP LSQA A LPE G IIN+ DQRV+N+ P F+SYT+SK+G+W +TR LA+ALAPR+RVN IGPGP LPS Q +QF RQAAR+PLG G P+EI D VR++L+APS+TGQM+ALDGGQHLGW P P Sbjct: 8 ALVTGAGKRIGRAIALGLARDGWAVAVHYHRSAAEAEAVVDAITGAGGKAAAVAADLRSEPETGSLVERAAGALGAALGCLINNASLFEFDAAETATRASWDAHMEVNLRAPFVLSQAFARQLPEAARGAIINVIDQRVLNLTPHFVSYTVSKSGLWTLTRTLAMALAPRIRVNGIGPGPALPSAYQEPDQFARQAARMPLGRGTTPEEITDAVRFLLSAPSITGQMLALDGGQHLGWAQPSTDDP 253 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10327.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10327.2.1 >prot_D-mesarthrocarpus_Contig10327.2.1 ID=prot_D-mesarthrocarpus_Contig10327.2.1|Name=mRNA_D-mesarthrocarpus_Contig10327.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=258bp MTETSTGHALVTGASKRIGRAIAIALAEDGWTVGIHHRGSPDDADTLCRHback to top mRNA from alignment at D-mesarthrocarpus_Contig10327:2912..3685- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10327.2.1 ID=mRNA_D-mesarthrocarpus_Contig10327.2.1|Name=mRNA_D-mesarthrocarpus_Contig10327.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=774bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10327:2912..3685- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10327:2912..3685- >mRNA_D-mesarthrocarpus_Contig10327.2.1 ID=mRNA_D-mesarthrocarpus_Contig10327.2.1|Name=mRNA_D-mesarthrocarpus_Contig10327.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=774bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10327:2912..3685- (Discosporangium mesarthrocarpum MT17_79)back to top |