mRNA_D-mesarthrocarpus_Contig10327.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10327.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10327.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2D7FL80_9PROT (UvrABC system protein C n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FL80_9PROT)

HSP 1 Score: 1088 bits (2815), Expect = 0.000e+0
Identity = 549/628 (87.42%), Postives = 581/628 (92.52%), Query Frame = 1
Query:    1 MADETKNAQTPENEALKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAEE 1884
            M +  ++A T  NEAL GAALI SRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNR+TSY+R  GQPERIRLMVAQT DLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDT+WVQLIKHRG RN+ GEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQI+RCTAPCV LIS EDY EIVDQA+AFMRGRS DVQESMSRKME+AS ALDYETAAI+RDRIRALTQIQAHQDIHVGSIGEADIIAAHQ+GG+TCVQVFFYRAGQNYGTRTFFPNH R+IP  +VLEAFIGQFY+DKKPPKL+LVSHSLPNQELV QALSI A RKA++S+PQRG RKSLIDSAA NAA+ALARRLSESATQRKLLDG+AAL DLDAPPKRIEVYDNSHI+GTNALGAMIVSGE+GFEKSAYRKFNIKNPD +PGDDYAMMREV+TRRFARALKED DRE+  WPDLV+IDGGPGQL+ VMEVLDELGI DQPLVSIAKGPDRNAGRERFHVPGR+PFSLP QDP+LYFMQRLRDEAHRFA G HR RRSKQ  KSVIDEV GIGA RKRAL  HFGSA S GRAGL DLEAVDGIS TVAK+IYDHFHAEE
Sbjct:    1 MVERIEDAPTKNNEALNGAALITSRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRLTSYSRNRGQPERIRLMVAQTADLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTEWVQLIKHRGVRNKGGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIRRCTAPCVKLISSEDYAEIVDQAEAFMRGRSRDVQESMSRKMEEASSALDYETAAIHRDRIRALTQIQAHQDIHVGSIGEADIIAAHQEGGTTCVQVFFYRAGQNYGTRTFFPNHGRAIPVAEVLEAFIGQFYADKKPPKLVLVSHSLPNQELVCQALSIHAGRKADVSKPQRGTRKSLIDSAAQNAAEALARRLSESATQRKLLDGLAALLDLDAPPKRIEVYDNSHIAGTNALGAMIVSGEDGFEKSAYRKFNIKNPDIKPGDDYAMMREVMTRRFARALKEDLDRERGNWPDLVLIDGGPGQLTAVMEVLDELGISDQPLVSIAKGPDRNAGRERFHVPGREPFSLPPQDPILYFMQRLRDEAHRFAXGXHRXRRSKQXXKSVIDEVSGIGAXRKRALXXHFGSAXSXGRAGLTDLEAVDGISKTVAKKIYDHFHAEE 628          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A3D2BPE7_9PROT (UvrABC system protein C n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BPE7_9PROT)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 498/620 (80.32%), Postives = 564/620 (90.97%), Query Frame = 1
Query:   22 AQTPENEALKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAE 1881
            A + +  AL GA LI+SRLK+LP GPG+YRMTDAAG PLYVGKAK+LR RVTSY R  G PERIR+MVA T +LE+VSTHTEVEALLLESNLIKQL+PRYNILLRDDKS+PYILLRTD+DW QL+KHRGARN+DGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDS+F GRTRPCLQYQIKRCTAPCVDLI  ++YGEIV QA+AF+ GRS DVQ+++S+KME AS  LD+ETAAIYRDRIRALTQ+QAHQDI+V SI EAD+I+AHQ GGSTCVQVFFYRAGQNYGTRT+FPNHAR+I   +VLEAF+GQFYSDKKPPKL+L+SH LPNQELV++AL +RADR  E+S PQRG R++LI+SA  NA+DALARRLSESATQRKLLDGVA LFDLD PPKRIEVYDNSHISGTNALGAMIVSGE+GFEK+AYRKFNIK+PDT  GDDYAMMREVLTRR +RAL+EDPDR  +TWPDL++IDGGPGQLSV +EV+DELGIPDQP+V+IAKGPDR+AGRERFH+P R PF+LP+QDPVLYFMQRLRDEAHRFAIGSHR RRSK I+KSVIDE+PG+GAKRKRALLNHFGSA SV RAGL+DLE VDGIS TVA+RIYD+F+ +
Sbjct:    3 ATSSDAPALSGAELISSRLKHLPNGPGIYRMTDAAGMPLYVGKAKSLRKRVTSYTRPRGLPERIRVMVAHTTELEVVSTHTEVEALLLESNLIKQLRPRYNILLRDDKSFPYILLRTDSDWAQLMKHRGARNKDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSIFAGRTRPCLQYQIKRCTAPCVDLIDADEYGEIVGQARAFLSGRSQDVQQALSKKMENASQELDFETAAIYRDRIRALTQVQAHQDINVRSIDEADVISAHQKGGSTCVQVFFYRAGQNYGTRTYFPNHARAINVGEVLEAFVGQFYSDKKPPKLVLISHKLPNQELVKKALIVRADRNVEVSCPQRGTRRTLIESAMRNASDALARRLSESATQRKLLDGVAELFDLDTPPKRIEVYDNSHISGTNALGAMIVSGEDGFEKNAYRKFNIKDPDTVSGDDYAMMREVLTRRLSRALREDPDRAGNTWPDLIMIDGGPGQLSVALEVIDELGIPDQPIVAIAKGPDRDAGRERFHMPERTPFTLPMQDPVLYFMQRLRDEAHRFAIGSHRARRSKDIAKSVIDEIPGVGAKRKRALLNHFGSATSVARAGLSDLETVDGISHTVARRIYDYFNVD 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2D8PUE4_9PROT (UvrABC system protein C n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUE4_9PROT)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 498/608 (81.91%), Postives = 558/608 (91.78%), Query Frame = 1
Query:   52 GAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFH 1875
            GA  IASRLK LPTGPGVYRM DA G+PLYVGKA+NLRNRVT+Y R  G PERIR+MV  T +LEIVSTHTEVEALLLESNLIKQL+PRYN+LLRDDKS+P+ILLR DT+W QL+KHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVF+GRTRPCLQYQIKRC APCVD IS ++Y  IVDQA+AF+ GRS +VQ  MS++ME+AS+ALDYE+AAIYRDRIRALTQIQAHQDI+VGSIGEADIIAAHQDGG+TCVQVFFYRAGQNYGTRT+FPNHA+SIP ++VLEAFIGQFYSDKKPPKL+LVSH LP+Q+L+ +AL++RADRK ++SRPQRG+R++L+++A  NAADA ARRLSES+TQRKLL+GVA LFDL+  P+RIEVYDNSHISGTNALGAMIVS EEGFEK+AYRKFNIKNPDT PGDDYAMMREVLTRRFARALKEDP+R   TWPDLV+IDGGPGQLS  MEVL+ELGI DQP+ SIAKGPDR+AGRERFHVP R PF+LP+QDPVLYFMQRLRDEAHRFAIGSHRNRRSK I +SVIDE+ GIGAKRKRALLNHFGSAASV RAGL DLEAVDGIS+ VA+RIYDHF+
Sbjct:   13 GAEFIASRLKQLPTGPGVYRMIDATGQPLYVGKARNLRNRVTAYTRPSGLPERIRVMVGHTEELEIVSTHTEVEALLLESNLIKQLRPRYNVLLRDDKSFPFILLRKDTEWAQLLKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFSGRTRPCLQYQIKRCVAPCVDYISADEYSHIVDQARAFLSGRSREVQRDMSKRMEEASNALDYESAAIYRDRIRALTQIQAHQDINVGSIGEADIIAAHQDGGTTCVQVFFYRAGQNYGTRTYFPNHAKSIPVDEVLEAFIGQFYSDKKPPKLVLVSHRLPSQDLMAEALTVRADRKVDVSRPQRGSRRNLVENAVQNAADAHARRLSESSTQRKLLEGVADLFDLEGTPRRIEVYDNSHISGTNALGAMIVSSEEGFEKNAYRKFNIKNPDTVPGDDYAMMREVLTRRFARALKEDPERNSGTWPDLVLIDGGPGQLSAAMEVLEELGISDQPIASIAKGPDRDAGRERFHVPTRQPFTLPMQDPVLYFMQRLRDEAHRFAIGSHRNRRSKDIGRSVIDEISGIGAKRKRALLNHFGSAASVARAGLMDLEAVDGISSAVAQRIYDHFN 620          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2D8G2X5_9PROT (UvrABC system protein C n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G2X5_9PROT)

HSP 1 Score: 947 bits (2449), Expect = 0.000e+0
Identity = 462/609 (75.86%), Postives = 537/609 (88.18%), Query Frame = 1
Query:   46 LKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHF 1872
            L GA LI+SRLK+LP GPG+Y+M DA GKPLYVGKAK LR+R++SY R  G PERIR+M+A+T +LEI+STHTEVEALLLESNLIK+L+P YNILLRDDKS+PYILLR + DW QL+KHRGAR RDGEYFGPFASA AVNRTLNTLQKV PLRSCSDS+F+GRTRPCLQYQIKRCTAPCV L++ ++Y EIVDQA+AF+ GRSHDVQE++S+KME AS++LDYETAAIYRDRIRALTQ QAHQDI+VGSI EADIIAAHQ+GG+TC+QVFFYRAGQNYG RT+FPNHA++    +VLEA +GQFYSDK PP+L+L+SH LPN  LV +ALSI+AD K EIS+PQRG RK+LI+SA  NAAD LAR+LSES TQRKLLD  A LF+L++PP+RIEVYDNSHISG+N LG MIVSGEEGFEK AYRKFNIKN D  PGDDYAMMREVLTRR +RAL+ED DR+K+TWPDL++IDGGPGQL+V +EVLDELGI D  + +IAKGPDR+AGRERFH+PGR PF+LPLQDPVLYFMQRLRDEAHRFAIGSHR RR+K ++KS +DE+PGIG KRKRALLNHFGSA SV  AGL+D E VDGI+  VA+RI+ HF
Sbjct:   11 LAGAELISSRLKHLPNGPGIYQMIDATGKPLYVGKAKKLRSRISSYTRLRGLPERIRVMIARTANLEIISTHTEVEALLLESNLIKKLRPHYNILLRDDKSFPYILLRANADWAQLLKHRGARXRDGEYFGPFASANAVNRTLNTLQKVXPLRSCSDSIFSGRTRPCLQYQIKRCTAPCVGLVAADEYDEIVDQARAFLNGRSHDVQETLSKKMEAASESLDYETAAIYRDRIRALTQXQAHQDINVGSIKEADIIAAHQEGGATCIQVFFYRAGQNYGGRTYFPNHAKAFAVXEVLEAXVGQFYSDKTPPRLILISHKLPNHSLVNEALSIQADNKVEISKPQRGTRKTLIESAVRNAADTLARKLSESTTQRKLLDRTAELFELESPPRRIEVYDNSHISGSNPLGVMIVSGEEGFEKKAYRKFNIKNSDISPGDDYAMMREVLTRRLSRALREDLDRDKTTWPDLILIDGGPGQLAVAVEVLDELGIDDLRVAAIAKGPDRDAGRERFHIPGRMPFTLPLQDPVLYFMQRLRDEAHRFAIGSHRARRNKSVAKSALDEIPGIGXKRKRALLNHFGSARSVASAGLSDXETVDGINRKVAQRIFSHF 619          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2S6Q8Y2_9PROT (UvrABC system protein C n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q8Y2_9PROT)

HSP 1 Score: 931 bits (2406), Expect = 0.000e+0
Identity = 456/612 (74.51%), Postives = 536/612 (87.58%), Query Frame = 1
Query:   46 LKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAE 1881
            L GAALI+S LK+LP GPGVYRM DA+G PLY+GKAK+LR RV SY R  G  +RIR+MV  T DLE+VST+TE EALLLESNLIK+L+PRYNILLRDDKS+P+ILLRT++DW QLIKHRGAR RDG+YFGPFASA AVNRT+NTLQKVFPLRSC+DS+F+GR RPCLQYQI RCTAPCV LIS ++Y EIVDQA+AF+ G S DVQ ++S+KME AS+  DYETAAIYRDRIRALTQIQAHQ+I+VGSI +ADIIAA Q+GG TC+Q+FF+R+GQNYGTRT+FPNHA++I  + VLEAFIGQFYS K+PPKL+L+SH LPNQ LV++AL IRA RK EIS P+RG+R+++I++A  NA DALARRLSESA+Q KLL+GVA L DL+ PPKRIEVYDNSHISGTN LG MIVSG +GFEK AYR+FNIKN + EPGDDYAM REVLTRR +RALKEDP+RE S WPDL+++DGG GQLS+ M+VLDELGIPDQP+ +IAKGPDRNAGRERF+VPGR+PF+LP+QDPVLYFMQRLRDEAHRFA+G HR RR K   +SVIDE+PGIG KRKRALLNHFGSAAS+  AGL+DLEAV+GIS TVA+R+YDHF  +
Sbjct:   11 LSGAALISSLLKHLPAGPGVYRMIDASGVPLYIGKAKSLRKRVNSYTRPQGLSKRIRVMVEHTADLEVVSTNTEAEALLLESNLIKKLRPRYNILLRDDKSFPFILLRTESDWAQLIKHRGARKRDGDYFGPFASASAVNRTINTLQKVFPLRSCTDSIFSGRNRPCLQYQINRCTAPCVGLISRQEYSEIVDQARAFLTGHSRDVQHTLSKKMEDASEVRDYETAAIYRDRIRALTQIQAHQEINVGSIADADIIAASQNGGLTCIQIFFFRSGQNYGTRTYFPNHAKTISVDRVLEAFIGQFYSGKEPPKLVLISHELPNQILVQEALGIRAGRKVEISLPRRGSRRAVINNAIRNANDALARRLSESASQLKLLEGVADLLDLEEPPKRIEVYDNSHISGTNPLGVMIVSGYDGFEKKAYRRFNIKNHEAEPGDDYAMTREVLTRRLSRALKEDPNREGSIWPDLILLDGGRGQLSIAMDVLDELGIPDQPIAAIAKGPDRNAGRERFYVPGREPFTLPVQDPVLYFMQRLRDEAHRFAVGGHRARRGKNTFRSVIDEIPGIGIKRKRALLNHFGSAASIAHAGLSDLEAVNGISRTVAQRVYDHFRVD 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2E6GMM3_9PROT (UvrABC system protein C n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GMM3_9PROT)

HSP 1 Score: 813 bits (2100), Expect = 3.430e-290
Identity = 399/627 (63.64%), Postives = 499/627 (79.59%), Query Frame = 1
Query:    1 MADETKNAQTPENEALKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAE 1881
            M D+T+ +        +GA +IA  +K L   PGVYRM D  G PLYVGKAKNL+ RV +Y+R    P R++ M+A T  +EIV THTEVEALLLESNLIK+LKPRYN++LRDDKS+PYILL + TDW QLIKHRG R+RDGEYFGPFASAGAVNRTL  LQ+ FPLR+CSD++F GRTRPCLQYQIKRCTAPCVD IS EDYG IVD+A+ F+ G S ++Q+++  +ME ASDA++YETAAI+RDRI+ALTQIQAHQDI+V S+G+ADI+AAH   G  C+QVFF+R GQN+G RT+FP  A  +P  ++L +F+GQFYSDK PP  +LVS + P++ L+  ALS+RA RK  +S+P RG++++L+D A  NA +ALARRL+ES+TQR+LL+G+A +  LD+PP+RIEVYDNSHISG+  +G MIV+G +G  K+AYRKFNIK+   EPGDDY MM+EVLTRRF RA +EDPDR+   WPDLV+IDGG G LS V +V++EL + D P+V+IAKGPDR+AGRERF +  R  F L   DPVLYF+QRLRDEAHRFAIGSHR RR K I +S +DE+ G+GA RKRALL+HFGSA SVG AG+ADLEAV GIS  +AK+IYDHFH++
Sbjct:    1 MTDKTETSVILAPSLKRGAGIIAEVVKTLTGSPGVYRMLDEDGNPLYVGKAKNLKKRVVTYSRPDRLPVRLQRMIAATRSMEIVETHTEVEALLLESNLIKKLKPRYNVMLRDDKSFPYILLTSGTDWAQLIKHRGGRSRDGEYFGPFASAGAVNRTLAALQRAFPLRNCSDNIFAGRTRPCLQYQIKRCTAPCVDRISHEDYGTIVDEARDFLTGDSRNLQKALLERMETASDAMEYETAAIFRDRIKALTQIQAHQDINVQSVGDADIVAAHAGSGIVCIQVFFFRNGQNFGNRTYFPTRATGLPISEILASFLGQFYSDKTPPPTVLVSETPPDRTLIADALSVRAGRKVTLSKPARGSKRTLVDHALANAREALARRLAESSTQRRLLEGLADILKLDSPPQRIEVYDNSHISGSKPVGGMIVAGPDGLIKNAYRKFNIKDQSLEPGDDYGMMQEVLTRRFQRAQREDPDRQSGNWPDLVLIDGGQGHLSAVCDVMEELAVDDIPVVAIAKGPDRDAGRERFFMVDRPSFMLKPNDPVLYFLQRLRDEAHRFAIGSHRVRRKKAIGESPLDEIVGVGANRKRALLHHFGSARSVGDAGVADLEAVKGISGPLAKKIYDHFHSD 627          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A6N7FC13_9PROT (UvrABC system protein C n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC13_9PROT)

HSP 1 Score: 800 bits (2065), Expect = 1.180e-284
Identity = 397/610 (65.08%), Postives = 481/610 (78.85%), Query Frame = 1
Query:   52 GAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAE 1881
            G A I   L+ L   PGVYR  D  G PLYVGKAKNL+ RV +Y R    P RI+ M+A+   +EIV+THTEVEALLLESNLIK+LKPRYN+LLRDDKS+PYILL TD DW QLIKHRGAR+R GE+FGPFASAGAVNRTL  LQ+ FPLRSCSDS+F  RTRPCLQYQIKRCTAPCV  I  E+Y  IVD+A+ F+ GRS D+Q+++S +M  AS+AL++E AA++RDRI ALTQIQAHQDI+V ++G+AD+IA HQ GG  C+QVFF+RAGQN+GTRT+FP HA  +   +VLE F+GQFY+DK+PP  +L+  +L N  LV  ALS+RA RK  + RP RG ++ L++ A  NA ++LARRLSESATQ +LLDGVA +F LD  P+RIEVYDNSHI G+  +G MIV+G EG  K+AYRKFNI++    PGDD+AMMREVLTRRF+RALKEDPDRE + WPDLV+IDGG GQL+   E L +LG+ D  L +I+KGPDR+AGRE FH+ GR  F L   DPVLYF+QRLRDEAHRFAIGSHR RRS+ I++S +DE+ GIGA RKRALL+HFGSA +V  AG ADLEAV GIS  VAK+IYDHFHA+
Sbjct:   32 GVAAIGDCLRTLGGTPGVYRFLDGDGGPLYVGKAKNLKRRVAAYTRPERMPVRIQRMIARVRAVEIVTTHTEVEALLLESNLIKKLKPRYNVLLRDDKSFPYILLTTDHDWPQLIKHRGARSRKGEFFGPFASAGAVNRTLAALQRAFPLRSCSDSIFASRTRPCLQYQIKRCTAPCVGRIGAEEYNAIVDEARGFLTGRSRDLQQTLSARMAAASEALEFEGAAVFRDRIHALTQIQAHQDINVAALGDADVIAVHQGGGLACIQVFFFRAGQNFGTRTYFPAHAAGLEPAEVLEPFLGQFYADKEPPGQVLIGEALENHALVEDALSVRAGRKVRLQRPTRGPKRKLVEHALANARESLARRLSESATQIRLLDGVARVFGLDGTPRRIEVYDNSHIQGSAPVGGMIVAGPEGLMKNAYRKFNIRDAAIAPGDDFAMMREVLTRRFSRALKEDPDRESANWPDLVLIDGGAGQLTAARETLADLGLGDLALAAISKGPDRDAGREHFHMDGRHSFMLKPNDPVLYFLQRLRDEAHRFAIGSHRTRRSQAITRSPLDEIAGIGAARKRALLHHFGSARAVSEAGTADLEAVAGISRAVAKKIYDHFHAD 641          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: UPI00167A22F6 (excinuclease ABC subunit UvrC n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167A22F6)

HSP 1 Score: 800 bits (2065), Expect = 1.520e-284
Identity = 395/621 (63.61%), Postives = 490/621 (78.90%), Query Frame = 1
Query:   49 KGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKN----------PDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAE 1881
            +G A+I   L+ +P GPGVYRM D  G  LYVGKA++L+ RVT+Y      P RI  MV++T  +E+V+THTEVEALLLESNLIK+LKPRYN+LLRDDKS+P+IL+  D  + Q+ KHRGAR R G+YFGPFASAGAVNRT+  LQ+ F LR+CSDS+F+ RTRPCLQYQIKRC+APCV  +S  +Y E+VD+A+ F+ GRSHDVQ+ ++  M+QASDAL++ETAAIYR+RIRALT IQAHQDI+V  I EAD+IA H +GG +C+QVFF+RAG N+G R +FP+H +     DVL AFIGQFY DK  P+L+L+S ++P  EL+ +ALS RADR+ E+  PQRG+++ L++ A LNA +AL RR++ESA+QRKLLDGVA +F LDA P+R+EVYDNSH  GTN++G MIV+G EGF K+AYRKFNI+N           D E GDDYAMMR+VLTRRFARALKEDP+R    WPDLV+IDGG   L+V  EV  ELGI D P+ SIAKGPDR+AGRERF VPGRDPF L  +DPVLYF+QRLRDEAHRFAI +HR RR+K +  + +DE+ GIGA+RK+ALL+HFGSA  V RAGLADLEAVDGIS TVAKR+YD FH +
Sbjct:   28 RGVAVIREHLRTMPAGPGVYRMLDDDGDVLYVGKARSLKKRVTNYTHPAKLPHRIFRMVSETTRMEVVTTHTEVEALLLESNLIKRLKPRYNVLLRDDKSFPHILMTGDHPYPQITKHRGARTRKGDYFGPFASAGAVNRTITALQRAFLLRNCSDSMFSARTRPCLQYQIKRCSAPCVGYVSETEYAELVDEARRFLTGRSHDVQQELAAHMQQASDALEFETAAIYRNRIRALTAIQAHQDINVEGIEEADVIAMHAEGGHSCIQVFFFRAGSNFGNRAYFPSHDKETEDSDVLAAFIGQFYDDKPAPRLILLSQAVPEAELIAEALSTRADRRVELLVPQRGSKRKLVEHATLNAREALGRRMAESASQRKLLDGVAQVFGLDATPERVEVYDNSHTRGTNSVGGMIVAGPEGFVKNAYRKFNIRNVADGERDERVDDLEAGDDYAMMRQVLTRRFARALKEDPERSSGNWPDLVLIDGGATHLAVAQEVFAELGIDDVPVASIAKGPDRDAGRERFFVPGRDPFMLERRDPVLYFLQRLRDEAHRFAIETHRARRTKALGSNPLDEISGIGARRKKALLHHFGSARGVARAGLADLEAVDGISRTVAKRVYDFFHED 648          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: UPI00163D827A (excinuclease ABC subunit UvrC n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00163D827A)

HSP 1 Score: 796 bits (2057), Expect = 1.050e-283
Identity = 393/621 (63.29%), Postives = 496/621 (79.87%), Query Frame = 1
Query:   13 TKNAQTPENEALKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFH 1875
            T    +PE    +G A+I + LK +P+ PGVYRM +A G  LYVGKAKNL+ RV +Y R    P R++ MV++TV +E+V+THTE EALLLESNLIK+L PRYNILL+DDKS+P+IL+  D DW Q++KHRGAR+  GEYFGPFASAGAVN+TL+ LQK F LRSCSD+VF  RTRPCL YQIKRC+APCV+ IS +DY  +V++A+AF+ G S  +Q+ +SR+ME A++ LDYE AA +RDRIRAL +IQA QDI++ SI EAD+IA HQ GG +C+QVFF+R+G NYGTR +FP HA+     +VLEAFIGQFY+DK PP+ +L+S  LP+ +L+ +AL++RA RK  ++ P+RG ++ LID A  NA +AL RRL+ES++Q KLL GVA +F LDAPP+RIEVYDNSHI G+NA+G MIV+G EG  K+AYRKFNI+  +  PGDDYAMMREVLTRRF RA KEDPDR++  WPDLV+IDGG GQLSV  EV  +LG+ D  LV+I+KGPDRNAGRE+FH+ GR+ F L ++DPVLYF+QRLRDEAHRFAIG+HR RRSK I +S +D+V GIGA+RK+ALL+HFGSA  V  AGLADLEAV+GIS T+AK+IYDHFH
Sbjct:    2 TPQEASPEGPCARGVAVIEAYLKTMPSSPGVYRMLNARGDALYVGKAKNLKKRVVAYTRSDRLPLRLQRMVSETVTMEVVTTHTEAEALLLESNLIKRLGPRYNILLKDDKSFPHILITGDHDWPQIVKHRGARSVKGEYFGPFASAGAVNQTLSHLQKAFLLRSCSDAVFASRTRPCLLYQIKRCSAPCVERISHQDYMALVEEARAFLSGHSQKIQQELSRRMEDAAERLDYEEAAAFRDRIRALARIQARQDINLPSIEEADVIALHQAGGQSCIQVFFFRSGCNYGTRAYFPAHAQDAEPGEVLEAFIGQFYADKMPPRDILLSDDLPHHDLLVEALAVRAGRKVGVTVPKRGDKRKLIDHALTNAREALGRRLAESSSQAKLLQGVADIFGLDAPPQRIEVYDNSHIMGSNAVGGMIVAGPEGLMKAAYRKFNIRGDELTPGDDYAMMREVLTRRFKRAQKEDPDRDRGLWPDLVLIDGGKGQLSVACEVFADLGVEDVALVAISKGPDRNAGREQFHMAGRESFMLDMKDPVLYFLQRLRDEAHRFAIGTHRARRSKAIGQSQLDDVAGIGARRKKALLHHFGSAREVANAGLADLEAVEGISRTMAKKIYDHFH 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Match: A0A2E5KUJ7_9PROT (UvrABC system protein C n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KUJ7_9PROT)

HSP 1 Score: 795 bits (2054), Expect = 5.950e-283
Identity = 395/612 (64.54%), Postives = 480/612 (78.43%), Query Frame = 1
Query:   49 KGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGKAKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLIKQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFASAGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISPEDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRALTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFPNHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRADRKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFDLDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEPGDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVLDELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLRDEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGRAGLADLEAVDGISTTVAKRIYDHFHAEE 1884
            +G A+I S LK LP  PGVYRM D  G+ LYVGKAKNL+ RV SYA   G   RI  MVA T D+E ++THTEVEALLLESNLIK+LKPRYNILLRDDKS+PYIL+  D +W Q+ KHRGAR+R GEYFGPFASAGAVN T+N LQ+ FPLRSC+DS F+ RTRPCLQYQI+RCTAPCV  IS E Y +IV +A+ F+ GRSH  Q+ +S +M++AS  L++ETAA+YRDRIRALTQIQA Q I++ ++GEAD+I A++D G TCVQVFF+R GQNYG R +FP HA+S   E+VL AF+GQFY+DK PP LLL SH +  + +V +AL++RA+R+  +  P RGA++ LI+ A  NA +ALARRL+ESA+QR+LL+GVA +F L+ PP+RIEVYDNSHI G+ ALG MIV+G EG  K+ YRKFNIK  D  PGDDY MM EVLTRRF+R LKED DRE   WPDLV+IDGG G L    +V  +LG+ D  L +IAKGP RNAGRE  HVPG+  F L   DPVLYF+QRLRDEAHR+AIGSHR +RS++I +S +DE+ GIGAKRKRALL+HFGSA SV +AGLADLEAV+GIS  VAK IYDHFH E+
Sbjct:   33 RGRAVIRSHLKTLPNSPGVYRMIDEKGQVLYVGKAKNLKKRVASYANLKGLSTRILGMVAATADMEFITTHTEVEALLLESNLIKELKPRYNILLRDDKSFPYILVAGDHEWAQITKHRGARSRRGEYFGPFASAGAVNETINALQRAFPLRSCTDSTFSTRTRPCLQYQIRRCTAPCVGKISHEAYEQIVHEAREFLSGRSHRTQQELSTRMQEASSNLEFETAAVYRDRIRALTQIQAKQGINIPTLGEADVIGAYRDAGQTCVQVFFFRTGQNYGNRAYFPAHAKSDTIEEVLTAFVGQFYADKTPPSLLLTSHEVDGRTIVEEALAVRAERRVNVRVPHRGAKRQLIEHAVNNAREALARRLAESASQRRLLEGVARIFGLETPPERIEVYDNSHIRGSAALGGMIVAGAEGLLKNQYRKFNIKQEDLTPGDDYGMMTEVLTRRFSRLLKEDEDREGQQWPDLVLIDGGAGHLHTAQQVFADLGVSDVGLAAIAKGPHRNAGRETLHVPGKAAFLLESNDPVLYFLQRLRDEAHRYAIGSHRAKRSQKIGRSTLDEISGIGAKRKRALLHHFGSARSVEQAGLADLEAVEGISNGVAKAIYDHFHPED 644          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10327.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FL80_9PROT0.000e+087.42UvrABC system protein C n=1 Tax=Rhodospirillaceae ... [more]
A0A3D2BPE7_9PROT0.000e+080.32UvrABC system protein C n=2 Tax=Rhodospirillaceae ... [more]
A0A2D8PUE4_9PROT0.000e+081.91UvrABC system protein C n=1 Tax=Rhodospirillaceae ... [more]
A0A2D8G2X5_9PROT0.000e+075.86UvrABC system protein C n=1 Tax=Alphaproteobacteri... [more]
A0A2S6Q8Y2_9PROT0.000e+074.51UvrABC system protein C n=1 Tax=Alphaproteobacteri... [more]
A0A2E6GMM3_9PROT3.430e-29063.64UvrABC system protein C n=1 Tax=Rhodospirillaceae ... [more]
A0A6N7FC13_9PROT1.180e-28465.08UvrABC system protein C n=1 Tax=Alphaproteobacteri... [more]
UPI00167A22F61.520e-28463.61excinuclease ABC subunit UvrC n=1 Tax=Thalassobacu... [more]
UPI00163D827A1.050e-28363.29excinuclease ABC subunit UvrC n=1 Tax=Telmatospiri... [more]
A0A2E5KUJ7_9PROT5.950e-28364.54UvrABC system protein C n=1 Tax=Alphaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10327contigD-mesarthrocarpus_Contig10327:185..2071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1207063.P24_04265
Preferred nameuvrC
PFAMsGIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
Model size1887
Max annot lvl204441|Rhodospirillales
KEGG koko:K03703
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-280
EggNOG OGsCOG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,2TT32@28211|Alphaproteobacteria,2JPBS@204441|Rhodospirillales
DescriptionThe UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
Cds size1887
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789173.023395-CDS-D-mesarthrocarpus_Contig10327:184..20711680789173.023395-CDS-D-mesarthrocarpus_Contig10327:184..2071Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10327 185..2071 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10327.1.1prot_D-mesarthrocarpus_Contig10327.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10327 185..2071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10327.1.1

>prot_D-mesarthrocarpus_Contig10327.1.1 ID=prot_D-mesarthrocarpus_Contig10327.1.1|Name=mRNA_D-mesarthrocarpus_Contig10327.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=629bp
MADETKNAQTPENEALKGAALIASRLKNLPTGPGVYRMTDAAGKPLYVGK
AKNLRNRVTSYARGHGQPERIRLMVAQTVDLEIVSTHTEVEALLLESNLI
KQLKPRYNILLRDDKSYPYILLRTDTDWVQLIKHRGARNRDGEYFGPFAS
AGAVNRTLNTLQKVFPLRSCSDSVFNGRTRPCLQYQIKRCTAPCVDLISP
EDYGEIVDQAQAFMRGRSHDVQESMSRKMEQASDALDYETAAIYRDRIRA
LTQIQAHQDIHVGSIGEADIIAAHQDGGSTCVQVFFYRAGQNYGTRTFFP
NHARSIPAEDVLEAFIGQFYSDKKPPKLLLVSHSLPNQELVRQALSIRAD
RKAEISRPQRGARKSLIDSAALNAADALARRLSESATQRKLLDGVAALFD
LDAPPKRIEVYDNSHISGTNALGAMIVSGEEGFEKSAYRKFNIKNPDTEP
GDDYAMMREVLTRRFARALKEDPDREKSTWPDLVIIDGGPGQLSVVMEVL
DELGIPDQPLVSIAKGPDRNAGRERFHVPGRDPFSLPLQDPVLYFMQRLR
DEAHRFAIGSHRNRRSKQISKSVIDEVPGIGAKRKRALLNHFGSAASVGR
AGLADLEAVDGISTTVAKRIYDHFHAEE*
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mRNA from alignment at D-mesarthrocarpus_Contig10327:185..2071-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10327.1.1 ID=mRNA_D-mesarthrocarpus_Contig10327.1.1|Name=mRNA_D-mesarthrocarpus_Contig10327.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1887bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10327:185..2071- (Discosporangium mesarthrocarpum MT17_79)
ATGGCCGATGAGACCAAAAATGCCCAGACGCCGGAGAACGAGGCACTTAA AGGTGCCGCGTTAATCGCGTCACGGCTGAAGAATCTGCCGACCGGCCCGG GCGTCTACCGGATGACCGATGCGGCGGGAAAACCGCTCTATGTCGGCAAG GCGAAGAACCTGCGCAACCGGGTGACGTCCTATGCGCGCGGTCACGGCCA GCCCGAACGCATCCGCCTGATGGTCGCCCAGACCGTCGATCTCGAAATCG TCAGCACGCACACCGAAGTCGAAGCATTGCTGCTCGAGAGTAATCTGATC AAGCAGTTGAAGCCGCGCTACAATATTCTGCTGCGCGACGATAAATCCTA TCCCTATATCCTGCTGCGGACCGATACGGACTGGGTGCAACTCATCAAGC ATCGCGGTGCGCGCAACAGGGACGGCGAGTATTTCGGCCCGTTTGCCTCC GCCGGGGCCGTCAACCGCACACTCAACACCCTGCAGAAAGTTTTCCCGCT ACGAAGCTGTTCCGATAGCGTGTTCAACGGCCGCACACGGCCCTGCCTGC AATACCAGATCAAGCGCTGTACAGCGCCCTGCGTCGATCTGATCTCACCC GAGGATTACGGCGAGATCGTCGACCAGGCGCAGGCCTTCATGCGCGGGCG CAGTCACGATGTACAGGAATCGATGTCGCGCAAGATGGAACAGGCGAGTG ACGCGCTGGATTACGAAACCGCCGCCATATACCGCGACCGGATCCGCGCG CTGACCCAGATCCAGGCCCATCAGGACATCCATGTCGGCAGCATCGGCGA AGCCGATATCATCGCCGCCCACCAGGATGGCGGATCGACCTGCGTTCAGG TGTTTTTCTATCGCGCCGGGCAGAATTACGGCACGCGGACGTTTTTTCCC AATCACGCGCGGTCGATCCCGGCGGAAGACGTGCTGGAAGCCTTTATCGG CCAGTTCTATTCGGACAAGAAACCGCCGAAGCTGTTGCTGGTCAGCCATT CCCTGCCCAATCAGGAGCTGGTGCGCCAGGCGCTGTCGATCCGTGCCGAC CGCAAGGCCGAGATATCGCGGCCCCAACGCGGCGCCCGCAAGAGCCTGAT CGACAGCGCTGCGCTGAACGCCGCCGATGCGCTCGCCCGGCGACTGTCGG AAAGCGCGACCCAGCGCAAATTGCTGGACGGCGTCGCCGCTTTGTTCGAT CTCGATGCGCCGCCGAAACGGATCGAAGTATACGATAACAGCCATATTTC GGGCACCAATGCGCTCGGCGCCATGATCGTATCGGGCGAGGAAGGGTTCG AGAAAAGCGCCTATCGCAAGTTCAACATCAAGAATCCAGACACCGAGCCG GGCGACGATTACGCGATGATGCGCGAAGTGCTGACCCGCCGGTTCGCCCG CGCGTTGAAAGAAGACCCGGACAGGGAAAAAAGCACCTGGCCCGACCTGG TGATTATCGATGGCGGACCCGGCCAGTTATCGGTTGTCATGGAGGTGCTG GACGAGCTCGGCATCCCGGATCAGCCTTTGGTCTCCATCGCCAAGGGACC AGACCGCAATGCCGGGCGCGAGCGGTTTCACGTGCCGGGGCGGGACCCGT TTTCGCTGCCGCTACAGGACCCGGTTCTGTATTTCATGCAGCGGCTGCGC GATGAAGCGCACCGGTTTGCGATCGGCAGCCACCGCAACCGGCGCTCGAA ACAGATCAGCAAGTCGGTTATCGATGAGGTGCCGGGTATCGGCGCGAAAC GCAAGCGCGCCCTGTTAAACCATTTCGGGTCCGCCGCCAGCGTCGGCCGC GCCGGTCTTGCCGACCTCGAAGCGGTCGACGGGATCAGCACAACAGTCGC AAAAAGAATTTATGATCACTTTCACGCCGAAGAGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10327:185..2071-

>mRNA_D-mesarthrocarpus_Contig10327.1.1 ID=mRNA_D-mesarthrocarpus_Contig10327.1.1|Name=mRNA_D-mesarthrocarpus_Contig10327.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1887bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10327:185..2071- (Discosporangium mesarthrocarpum MT17_79)
ATGGCCGATGAGACCAAAAATGCCCAGACGCCGGAGAACGAGGCACTTAA
AGGTGCCGCGTTAATCGCGTCACGGCTGAAGAATCTGCCGACCGGCCCGG
GCGTCTACCGGATGACCGATGCGGCGGGAAAACCGCTCTATGTCGGCAAG
GCGAAGAACCTGCGCAACCGGGTGACGTCCTATGCGCGCGGTCACGGCCA
GCCCGAACGCATCCGCCTGATGGTCGCCCAGACCGTCGATCTCGAAATCG
TCAGCACGCACACCGAAGTCGAAGCATTGCTGCTCGAGAGTAATCTGATC
AAGCAGTTGAAGCCGCGCTACAATATTCTGCTGCGCGACGATAAATCCTA
TCCCTATATCCTGCTGCGGACCGATACGGACTGGGTGCAACTCATCAAGC
ATCGCGGTGCGCGCAACAGGGACGGCGAGTATTTCGGCCCGTTTGCCTCC
GCCGGGGCCGTCAACCGCACACTCAACACCCTGCAGAAAGTTTTCCCGCT
ACGAAGCTGTTCCGATAGCGTGTTCAACGGCCGCACACGGCCCTGCCTGC
AATACCAGATCAAGCGCTGTACAGCGCCCTGCGTCGATCTGATCTCACCC
GAGGATTACGGCGAGATCGTCGACCAGGCGCAGGCCTTCATGCGCGGGCG
CAGTCACGATGTACAGGAATCGATGTCGCGCAAGATGGAACAGGCGAGTG
ACGCGCTGGATTACGAAACCGCCGCCATATACCGCGACCGGATCCGCGCG
CTGACCCAGATCCAGGCCCATCAGGACATCCATGTCGGCAGCATCGGCGA
AGCCGATATCATCGCCGCCCACCAGGATGGCGGATCGACCTGCGTTCAGG
TGTTTTTCTATCGCGCCGGGCAGAATTACGGCACGCGGACGTTTTTTCCC
AATCACGCGCGGTCGATCCCGGCGGAAGACGTGCTGGAAGCCTTTATCGG
CCAGTTCTATTCGGACAAGAAACCGCCGAAGCTGTTGCTGGTCAGCCATT
CCCTGCCCAATCAGGAGCTGGTGCGCCAGGCGCTGTCGATCCGTGCCGAC
CGCAAGGCCGAGATATCGCGGCCCCAACGCGGCGCCCGCAAGAGCCTGAT
CGACAGCGCTGCGCTGAACGCCGCCGATGCGCTCGCCCGGCGACTGTCGG
AAAGCGCGACCCAGCGCAAATTGCTGGACGGCGTCGCCGCTTTGTTCGAT
CTCGATGCGCCGCCGAAACGGATCGAAGTATACGATAACAGCCATATTTC
GGGCACCAATGCGCTCGGCGCCATGATCGTATCGGGCGAGGAAGGGTTCG
AGAAAAGCGCCTATCGCAAGTTCAACATCAAGAATCCAGACACCGAGCCG
GGCGACGATTACGCGATGATGCGCGAAGTGCTGACCCGCCGGTTCGCCCG
CGCGTTGAAAGAAGACCCGGACAGGGAAAAAAGCACCTGGCCCGACCTGG
TGATTATCGATGGCGGACCCGGCCAGTTATCGGTTGTCATGGAGGTGCTG
GACGAGCTCGGCATCCCGGATCAGCCTTTGGTCTCCATCGCCAAGGGACC
AGACCGCAATGCCGGGCGCGAGCGGTTTCACGTGCCGGGGCGGGACCCGT
TTTCGCTGCCGCTACAGGACCCGGTTCTGTATTTCATGCAGCGGCTGCGC
GATGAAGCGCACCGGTTTGCGATCGGCAGCCACCGCAACCGGCGCTCGAA
ACAGATCAGCAAGTCGGTTATCGATGAGGTGCCGGGTATCGGCGCGAAAC
GCAAGCGCGCCCTGTTAAACCATTTCGGGTCCGCCGCCAGCGTCGGCCGC
GCCGGTCTTGCCGACCTCGAAGCGGTCGACGGGATCAGCACAACAGTCGC
AAAAAGAATTTATGATCACTTTCACGCCGAAGAGTAG
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