mRNA_D-mesarthrocarpus_Contig10326.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10326.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10326.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.470e-39
Identity = 77/165 (46.67%), Postives = 111/165 (67.27%), Query Frame = 1
Query:    7 CKRVGATK-HKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISD-GVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            C ++G  + H   ++P+LSD  K  R+  ALS +     + +V++DM ++VH+DEKWFY+ K  R  YL P E  P+  + ++KRFITKVMFL+AVARPR I D G+W+DG+IG WP  +++ A R+S NR  GT   KP T+  + Y+E +IDKV+PAI A+ P
Sbjct:  123 CLKLGLFRAHSNAIRPILSDANKYCRMKHALSFV----SSDMVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWP 282          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.660e-39
Identity = 74/163 (45.40%), Postives = 106/163 (65.03%), Query Frame = 1
Query:   10 KRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISDGV-WFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            KR    K+   V+P+L+D  K  RV + + H+H     +   DDM + VHVDEKWF+  K  + +YL P E+ P     ++KR+ITKVMFL+AVARPR + D V WFDG+IG W   + + A RSS+NR  GT++ KP ++  + Y++++ID VIPAIKA+ P
Sbjct:   65 KRGIFVKYTSTVRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRT-CKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWP 226          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A4Q9LWQ4_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LWQ4_9MICR)

HSP 1 Score: 142 bits (357), Expect = 6.950e-39
Identity = 75/153 (49.02%), Postives = 104/153 (67.97%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISDG-VWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPA-TINAERYKELMIDKVIPAIKARMP 495
            VKP L+DK K DR+ F LS ++      ++ DD+YD+VH+DEKWFY+ K  R  YL   E++P+    ++KRFITK+MF+AAVARPR  +   ++FDG+IGIWP      A R+SKNR KGTM+ K   ++ A   K ++ID VIPAIK++ P
Sbjct:   93 VKPTLTDKNKMDRLKFCLSKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPER-NCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQEPARRNSKNRAKGTMITKNVESVAAVHCKNMIIDNVIPAIKSKFP 244          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A6A4ZVF9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVF9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.880e-38
Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 1
Query:   10 KRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRM-ISDGVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            KR    +H   VKP L++  K  R+ +A   +    G  ++V DM D+VHVDEKWFYM +  + +YL P E+ P     ++KRFITKVMFL+AVARPR   +   WFDG+IG W    ++ A RSS+NR  GTM+  P T+  + Y++++ID VIPAIKA+ P
Sbjct:  108 KRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRS-TKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 265          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A6G0XA16_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA16_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.670e-38
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 1
Query:    1 RLCKRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMI-SDGVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            R  KR    K+   VKP L++  K  RV +AL H+  +GG     DDM D VH+DEKWF+M K     YL P+E+ P     ++K+ ITKVMF+AAVARPR   +   WFDG+IG+WP    + A RSS+NR  GT+ L+   +N E YK++++ KVIPAIK + P
Sbjct:   91 RYFKRGVVVKYSSNVKPKLTEANKLARVKWALDHVRYRGGLNF--DDMMDVVHIDEKWFFMTKLKTNYYLAPDEEPPHRTE-RSKQHITKVMFMAAVARPRWDEATRTWFDGKIGVWPFVIEVPAARSSRNRPAGTLELQTIPVNKETYKDMLLSKVIPAIKEKWP 253          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 141 bits (356), Expect = 7.620e-38
Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 1
Query:   10 KRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRM-ISDGVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            KR    +H   +KP L++  K  R+ +A   +    G  ++V DM D+VHVDEKWFYM +  + +YL P E+ P     ++KRFITKVMFL+AVARPR   +   WFDG+IG W    T+ A RSS+NR  GTM+  P T+  + Y++++ID VIPAIKA+ P
Sbjct:   45 KRGFLVRHSISIKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRS-TKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 202          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.210e-37
Identity = 68/152 (44.74%), Postives = 106/152 (69.74%), Query Frame = 1
Query:   40 WVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISDGVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            +VKP L+    ++R+ +A+S +        + DDM+D VH+DEKWFY+ K  R  Y++ E+++      ++KRFITKVMFLAA+ARPR+  +G  FDG+IG+WP  + L A R+SKNR KGT++  P +++A+ Y E++++ V+PAIKA+ P
Sbjct:  150 YVKPFLTPSNIQERLRYAISFLQPLSNGNHIFDDMHDCVHIDEKWFYLTKVKRKFYVY-EDEAVAARFVKSKRFITKVMFLAAIARPRVDFNGNIFDGKIGVWPFVEKLPAKRNSKNRAKGTIVTTPQSVDAKVYLEMVLNNVVPAIKAKFP 300          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A6G0X1B6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1B6_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.680e-36
Identity = 73/156 (46.79%), Postives = 105/156 (67.31%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHMHKKG--GTRVVVD--DMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISD-GVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            +KP+L+D+ KR R+ F  SH+ +    G +   D  DM+D VH+DEKWF   KD R +YL  +E +P++ R ++KRFI KVMFLAAVARPR  +    +FDG+IG+WP    + A R S+NR  GTM+ K   + AE Y++ +++KVIPA+K+ MP
Sbjct:   28 LKPLLNDQNKRQRLWFCCSHVDRSAHAGAQQEFDFFDMFDVVHLDEKWFNADKDRRKVYLTKDE-APEVRRCKSKRFIPKVMFLAAVARPRWDNARSCFFDGKIGMWPFVVQVPAARGSRNRPAGTMVTKVCNVTAEAYRDFVVNKVIPAVKSEMP 182          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR)

HSP 1 Score: 139 bits (349), Expect = 1.700e-36
Identity = 77/164 (46.95%), Postives = 105/164 (64.02%), Query Frame = 1
Query:   10 KRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISDGV-WFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPA-TINAERYKELMIDKVIPAIKARMP 495
            KR+ +T     VKP L+DK K DR+ F LS ++       + DD+YD+VH+DEKWFY+ K  R  YL   E+ P+    ++KRFI K+MF+AAVARPR  +    +FDG+IGIWP      A R+SKNR KGTM+ K   ++ A   K ++ID VIPAIK++ P
Sbjct:  120 KRISST-----VKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEEPER-NYKSKRFIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMIIDNVIPAIKSKFP 277          
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.950e-36
Identity = 68/151 (45.03%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   46 KPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYDWVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARPRMISD-GVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKELMIDKVIPAIKARMP 495
            KP L+D     R+ +A++ +H     R + D MY  VHVDEKWF++    + +Y++ +E+   L   ++KRFITKVMFLAAVARPR   + G  F G+IG+WP  + + A R+S+NR KGT++L P  + AE Y+ +++DKV+PAI+A+MP
Sbjct:   33 KPYLTDANAVHRMQYAMAFLHPSPN-RFIFDSMYQTVHVDEKWFFLTTAKKRVYVYADEEVA-LRALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMP 181          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10326.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485LTD1_9STRA1.470e-3946.67Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
W4GWE0_9STRA2.660e-3945.40Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A4Q9LWQ4_9MICR6.950e-3949.02Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A6A4ZVF9_9STRA4.880e-3846.01Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0XA16_9STRA5.670e-3846.39Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GP40_9STRA7.620e-3846.01Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z7D1_9STRA2.210e-3744.74Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0X1B6_9STRA1.680e-3646.79Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A4Q9LLI7_9MICR1.700e-3646.95Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A6A5A6A6_9STRA3.950e-3645.03Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10326contigD-mesarthrocarpus_Contig10326:3889..4383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4792.ETI53387
Model size495
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.56e-36
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,3QGXT@4776|Peronosporales
Cds size495
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789172.9886663-CDS-D-mesarthrocarpus_Contig10326:3888..43831680789172.9886663-CDS-D-mesarthrocarpus_Contig10326:3888..4383Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10326 3889..4383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10326.3.1prot_D-mesarthrocarpus_Contig10326.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10326 3889..4383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10326.3.1

>prot_D-mesarthrocarpus_Contig10326.3.1 ID=prot_D-mesarthrocarpus_Contig10326.3.1|Name=mRNA_D-mesarthrocarpus_Contig10326.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=165bp
RLCKRVGATKHKRWVKPVLSDKQKRDRVGFALSHMHKKGGTRVVVDDMYD
WVHVDEKWFYMMKDGRGIYLHPEEDSPKLPRAQNKRFITKVMFLAAVARP
RMISDGVWFDGQIGIWPIADTLAAMRSSKNRKKGTMMLKPATINAERYKE
LMIDKVIPAIKARMP
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mRNA from alignment at D-mesarthrocarpus_Contig10326:3889..4383+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10326.3.1 ID=mRNA_D-mesarthrocarpus_Contig10326.3.1|Name=mRNA_D-mesarthrocarpus_Contig10326.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=495bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10326:3889..4383+ (Discosporangium mesarthrocarpum MT17_79)
CGCCTTTGCAAGCGGGTGGGAGCGACGAAGCACAAACGGTGGGTCAAGCC GGTGCTGTCGGACAAGCAGAAGCGTGATAGGGTGGGTTTTGCGCTGAGCC ACATGCACAAGAAGGGAGGAACTAGGGTGGTGGTGGACGACATGTACGAC TGGGTCCATGTGGATGAGAAGTGGTTCTACATGATGAAGGACGGGAGGGG AATCTACCTGCACCCAGAAGAGGACTCCCCCAAACTGCCAAGGGCCCAGA ACAAGCGATTCATCACCAAGGTGATGTTCCTTGCTGCTGTGGCAAGGCCT AGGATGATCTCCGATGGGGTGTGGTTTGACGGCCAGATCGGTATCTGGCC CATCGCGGATACTTTAGCGGCAATGCGCAGCAGTAAGAACCGCAAGAAGG GCACTATGATGCTGAAACCAGCTACGATAAACGCGGAGAGGTACAAGGAA CTCATGATCGATAAGGTCATCCCCGCAATCAAGGCGAGAATGCCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10326:3889..4383+

>mRNA_D-mesarthrocarpus_Contig10326.3.1 ID=mRNA_D-mesarthrocarpus_Contig10326.3.1|Name=mRNA_D-mesarthrocarpus_Contig10326.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=495bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10326:3889..4383+ (Discosporangium mesarthrocarpum MT17_79)
CGCCTTTGCAAGCGGGTGGGAGCGACGAAGCACAAACGGTGGGTCAAGCC
GGTGCTGTCGGACAAGCAGAAGCGTGATAGGGTGGGTTTTGCGCTGAGCC
ACATGCACAAGAAGGGAGGAACTAGGGTGGTGGTGGACGACATGTACGAC
TGGGTCCATGTGGATGAGAAGTGGTTCTACATGATGAAGGACGGGAGGGG
AATCTACCTGCACCCAGAAGAGGACTCCCCCAAACTGCCAAGGGCCCAGA
ACAAGCGATTCATCACCAAGGTGATGTTCCTTGCTGCTGTGGCAAGGCCT
AGGATGATCTCCGATGGGGTGTGGTTTGACGGCCAGATCGGTATCTGGCC
CATCGCGGATACTTTAGCGGCAATGCGCAGCAGTAAGAACCGCAAGAAGG
GCACTATGATGCTGAAACCAGCTACGATAAACGCGGAGAGGTACAAGGAA
CTCATGATCGATAAGGTCATCCCCGCAATCAAGGCGAGAATGCCT
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