mRNA_D-mesarthrocarpus_Contig10317.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10317.1.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI) HSP 1 Score: 101 bits (252), Expect = 7.390e-23 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 67 LLFGLRRKGSPGMPSASVLDHASMRFRDRVRGEFLPSRVLETQLYIFARQCALYFDLQRPSEVARCAGRFMPAYYSEIMG 306
LLFGL P ASVLD+ MRFR+R+ G+ L S VLETQLYIFARQCAL +L++P+EVAR GRFMPAYY E++G
Sbjct: 479 LLFGLAIPSQPQRLPASVLDYGQMRFRERLNGDGLHSLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPAYYHELVG 558
BLAST of mRNA_D-mesarthrocarpus_Contig10317.1.1 vs. uniprot
Match: A0A835YQQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.360e-12 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 67 LLFGLRRKGSPGMPSASVLDHASMRFRDRVRGEFLPSRVLETQLYIFARQCALYFDLQRPSEVARCAGRFMPAYYSEIM 303
LLFGL S + SVLD+ M+ R RV L S VL+TQLYIFARQC LY D+ RP E+A+C F+ A++ E++
Sbjct: 535 LLFGLP-SASGTAQACSVLDYRKMKLRQRVYPGSLFSFVLDTQLYIFARQCHLYLDMGRPDELAKCGIAFIRAFHQELL 612 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10317.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10317.1.1 >prot_D-mesarthrocarpus_Contig10317.1.1 ID=prot_D-mesarthrocarpus_Contig10317.1.1|Name=mRNA_D-mesarthrocarpus_Contig10317.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp KGKGSTRGGVGGEGKEEELTPFLLFGLRRKGSPGMPSASVLDHASMRFRDback to top mRNA from alignment at D-mesarthrocarpus_Contig10317:318..2138+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10317.1.1 ID=mRNA_D-mesarthrocarpus_Contig10317.1.1|Name=mRNA_D-mesarthrocarpus_Contig10317.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1821bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10317:318..2138+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10317:318..2138+ >mRNA_D-mesarthrocarpus_Contig10317.1.1 ID=mRNA_D-mesarthrocarpus_Contig10317.1.1|Name=mRNA_D-mesarthrocarpus_Contig10317.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10317:318..2138+ (Discosporangium mesarthrocarpum MT17_79)back to top |