mRNA_D-mesarthrocarpus_Contig10312.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10312.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig10312.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.180e-30
Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 1
Query:  136 VEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVS------PLSPGTSEYCLLCSYCRWSSQEAGLVEKEPTAL 480
            VEVLYGDYNG++RPL  M+FS DSRCLV+DHP SVQEEVESHFCP C S ++  +A +  NRC  CF       VL P PVS        S   + YCL C YC+W+S+++GLV ++P  L
Sbjct:    2 VEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAVSTENRCPHCFECPCCRCVLVPSPVSLDRSASSFSSAGTSYCLRCLYCQWTSEDSGLVAQDPAGL 122          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: D7FRF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF1_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 9.520e-29
Identity = 115/354 (32.49%), Postives = 162/354 (45.76%), Query Frame = 1
Query:  136 VEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSEYCLLCSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQRE--------GKALSEKTSTRHRPTRSARGAAIE-----GPWR-LTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRE-SSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARW---PQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDASKVN 1143
             EVLYGDYNG++RPL  M+FS DSRCLV+DHP SVQEEVESHFCP C S ++  +A +  N               A  P  PL           +  RWSS    L  + P+       +G+++  ++    ++ GA               G A   +T+      +  R  ++      GP R ++DL+  + ++A  + AASR+   P P        P   A         +LRE ++GP+  L   +SG   AGL ERV+       P +  P       G+                        P+RV+LR ++GKRCRKDLAAGRTGIL+K   +PL GD+S   
Sbjct:    2 AEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAMSAENSGPARTRASSHRTQRALAPPRPLERRRVAVATGAAR-RWSS---ALCSRRPS-------KGKRRPPSERGRRRVEGAXXXXXXXXXXXXXVPGFAPGARTAVAAAAAKWIRRCSLRRRVRPGPGRHVSDLDEAVARRAQVVVAASRSVALPRP--------PAATAAAAAVSPPWALREDTTGPDPALWTLSSGHETAGLAERVEG------PWSSPPRQSPPARGARXXXXXXXXXXXXXXXXXXXXXXVPRRVRLRARVGKRCRKDLAAGRTGILIKATFNPLDGDSSTAK 330          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: W7T460_9STRA (Dynactin p62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T460_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.360e-20
Identity = 104/357 (29.13%), Postives = 154/357 (43.14%), Query Frame = 1
Query:  133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLS---PGTSEYCLLCSYCRWSSQEA-GLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHR------------PTRSARGAAIEGP------WRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLME-ITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
            DV+V++ DY G   PL  + +S  S+CLVS HPES  EEVES +C  C + +   EA +  +RC +CF        L    V   S      + Y   C YCRWSS ++ GL+E  P AL+    + E        +  LL    LRQR   A++   + RH             PT +   +   GP      W L+DLE   ++     T A+                           +  +   +   EE++   T+  A +   E V R     +T    +P     G  S  A   +  P    +   +R P+R  L T+  +RCR+D+ AGR GIL+KP ++PL+GD+S
Sbjct:   35 DVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALL--QHLRQR---AVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDG-------------------------KETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPR----GPSSQTASRSLYPP----LTSHSR-PRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSS 352          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S4MWN0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWN0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.440e-9
Identity = 95/369 (25.75%), Postives = 141/369 (38.21%), Query Frame = 1
Query:  127 EPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPE----SVQEEVESHFCPCCNSLWQGTEAQAHGNR-------CLQCFXXXXXXXVLAPFPVSPLSPGTSEYCLLCSYCRWSSQ-----------EAGLVEKEPTALVTAAFE---GEKQRS----AQAAFLKLLGAAKLRQREG---KALSEKTSTRHRPTRSARGAAIEGPWRLTDLENML-NKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
            E D  VLY D+ GH  PLG  + +  SR L S   +    S   E++S +CP C +      A     R       C  C        V A  P              C YC+W+S            E G V KE  A  T A      ++  +    A + F KL+     R R+    K   E+++T  R       AA EG W +  LE  +  KK DW+    R  +    L+ +                        GPEE +    + +A  G P                P   +  + + ++ ++V +   +        P  V LR +  +RCR++LA GRTGIL+KP ++PL+GD+S
Sbjct:   16 EADAAVLYVDHAGHPAPLGLCYHATASRFLSSSIDDRSSPSTLTEIDSAYCPQCLAFHDAATASGSELRGRCPKGGCRLCPLCGAVCGV-AILPEEDGDGTKHAIVYQCGYCQWTSNSCSVSAPVSVGEGGSVSKEDAAGATEALARALADRTEAVSGDANSVFAKLVAGWGERSRDEERRKRQPEESATSRRGV----SAAGEG-WGIDTLEEAIAEKKKDWLDV--RQVIDGIALTKL------------------------GPEEDVVAEVTPRADGGGPR---------------PTPAQASAQNAISPAIVSSISDL-------LPLPVPLRARKSRRCRRELAEGRTGILVKPKVNPLEGDSS 330          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S0BYA9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYA9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.990e-9
Identity = 79/343 (23.03%), Postives = 138/343 (40.23%), Query Frame = 1
Query:  133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE--------YCLL-CSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHRPTRSARGAAIEGPWRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
            D  VLY D+ GH+ PL   +F++     V   P S   E++S FCP C   +    A ++  RC +            P    PL+ G  E         C+  C YCRW+S+E G+  K     +      + + + +AA  KL+  +K+R  E KA+    +++   +R      +   W     E+   ++       +   +P    S  +H               V L ++  P++      S        E + + + +++  NK              E +V              P  + L+ +  +RCR +LA+GR GIL+KP ++P++GD+S
Sbjct:    3 DSTVLYADHQGHLAPLSWSYFARKLSSCVDAVPPSTVTEIDSAFCPQCLHFYDTATASSNRGRCPR------PHCKQCPVCSCPLTLGIEESSKTKENFVCVFKCGYCRWTSEECGVASK-----IDFLKSADAKVAIEAATEKLILKSKMRS-EKKAVQ--LNSKDEISRDLFFQKLVDGWGDLAQEHERRRRH-----GNTYKMPSEKNSKPLHV----------LSNFVLLEKTEVPKKDFLSVPSSD------ELIAQGVRQLSSLNK-------------IEDLV--------------PLSIPLQARKSRRCRHELASGRPGILVKPKVNPVEGDSS 283          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S0G9X7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9X7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.110e-8
Identity = 79/343 (23.03%), Postives = 138/343 (40.23%), Query Frame = 1
Query:  133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE--------YCLL-CSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHRPTRSARGAAIEGPWRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
            D  VLY D+ GH+ PL   +F++     V   P S   E++S FCP C   +    A ++  RC +            P    PL+ G  E         C+  C YCRW+S+E G+  K     +      + + + +AA  KL+  +K+R  E KA+    +++   +R      +   W     E+   ++       +   +P    S  +H               V L ++  P++      S        E + + + +++  NK              E +V              P  + L+ +  +RCR +LA+GR GIL+KP ++P++GD+S
Sbjct:    3 DSTVLYADHQGHLAPLSWSYFARKLSSCVDAVPPSTVTEIDSAFCPQCLHFYDTATASSNRGRCPR------PHCKQCPVCSCPLTLGIEESSKTKENFVCVFKCGYCRWTSEECGVASK-----IDFLKSADAKVAIEAATEKLILKSKMRS-EKKAVQ--LNSKDEISRDLFFQKLVDGWGDLAQEHERRRRH-----GNTYKMPSEKNSKPLHV----------LSNFVLLEKTEVPKKDFLSVPSSD------ELIAQGVRQLSSLNK-------------IEDLV--------------PLSIPLQARKSRRCRHELASGRPGILVKPKVNPVEGDSS 283          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A8B7ZAW9_ACAPL (dynactin subunit 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZAW9_ACAPL)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5
Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 1
Query:  163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLA--------PFPVSPLSPGTSE-YCLLCSYCRWSSQEAGLVEKE 468
            G   P+ +++F +   CL       V  EV+SH+CP C       EA+   NRC  C         L+        P P  P    T + Y L C +CRW+S++AG+ +KE
Sbjct:   17 GLSSPITKLYFCK--HCLKLRCGRCVSHEVDSHYCPNCLENMPSAEARIKKNRCPNCLDCPSCKHTLSTRATSMALPDPSDPSKATTKKVYYLACGFCRWTSRDAGISDKE 125          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI0018DA2CAC (dynactin subunit 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA2CAC)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5
Identity = 34/111 (30.63%), Postives = 50/111 (45.05%), Query Frame = 1
Query:  163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEKE 468
            G   P+ +++F +   CL       V  EV+SH+CP C       EA+   NRC  C         L+    S   P  S+         Y L C +CRW+S++AG+ +KE
Sbjct:   17 GLSSPITKLYFCK--HCLKLRCGRCVSHEVDSHYCPNCLENMPSAEARIKRNRCPNCLDCPSCKHTLSTRATSMAVPDASDPSKATTKKVYYLACGFCRWTSRDAGISDKE 125          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI00062634FA (dynactin subunit 4 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI00062634FA)

HSP 1 Score: 58.5 bits (140), Expect = 2.840e-5
Identity = 39/126 (30.95%), Postives = 58/126 (46.03%), Query Frame = 1
Query:  127 EPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVL----APFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEK 465
            +PD  V Y    G ++P+ +++F +   CL       V  EV+SH+C  C       EA+   NRC+ CF        L    AP PV        E         Y L CS+CRW+S++AG+ ++
Sbjct:    6 QPDY-VRYACNCGSVKPVSKIYFCR--HCLKIRCGYCVCHEVDSHYCSNCMENPPSPEARLKKNRCMNCFDCPCCFQTLSTRAAPAPVRTAGNQNKEDAAPTPKKVYYLSCSFCRWTSRDAGIPDQ 128          
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI0014257CB4 (dynactin subunit 4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257CB4)

HSP 1 Score: 58.2 bits (139), Expect = 3.420e-5
Identity = 32/111 (28.83%), Postives = 49/111 (44.14%), Query Frame = 1
Query:  163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEKE 468
            G   P+ +++F +   C+       V  EV+SHFCP C       EA+   NRC  CF        L+    S     T +         Y L C +CRW+S++ G+ +K+
Sbjct:   17 GIRSPITKLYFCK--HCMKLRCKRCVSHEVDSHFCPNCLENMPSAEAKIKKNRCANCFDCPSCSHTLSTRATSVAHTDTEDQKKSTTRKVYYLACGFCRWTSRDIGMKDKQ 125          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KN23_9PHAE3.180e-3053.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRF1_ECTSI9.520e-2932.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7T460_9STRA4.360e-2029.13Dynactin p62 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S4MWN0_9STRA4.440e-925.75Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0BYA9_9STRA8.990e-923.03Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S0G9X7_9STRA2.110e-823.03Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8B7ZAW9_ACAPL1.150e-531.53dynactin subunit 4-like n=1 Tax=Acanthaster planci... [more]
UPI0018DA2CAC1.150e-530.63dynactin subunit 4-like n=1 Tax=Patiria miniata Ta... [more]
UPI00062634FA2.840e-530.95dynactin subunit 4 n=1 Tax=Athalia rosae TaxID=373... [more]
UPI0014257CB43.420e-528.83dynactin subunit 4-like n=1 Tax=Anneissia japonica... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10312contigD-mesarthrocarpus_Contig10312:988..4349 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4787.PITG_05458T0
PFAMsDynactin_p62
Model size2002
Max annot lvl4776|Peronosporales
KEGG koko:K10426
KEGG Pathwayko04962,ko05016,map04962,map05016
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.02e-11
EggNOG OGsKOG3896@1|root,KOG3896@2759|Eukaryota,3Q7G8@4776|Peronosporales
Ec32 ortholog descriptionDynactin subunit 4
Ec32 orthologEc-21_002710.1
DescriptionDynactin p62 family
Cds size1083
COG categoryN
BRITEko00000,ko00001,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10312.4.1prot_D-mesarthrocarpus_Contig10312.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10312 1580..3523 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789171.918289-UTR-D-mesarthrocarpus_Contig10312:987..10771680789171.918289-UTR-D-mesarthrocarpus_Contig10312:987..1077Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10312 988..1077 +
1680789171.930639-UTR-D-mesarthrocarpus_Contig10312:1576..15791680789171.930639-UTR-D-mesarthrocarpus_Contig10312:1576..1579Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10312 1577..1579 +
1680789171.980266-UTR-D-mesarthrocarpus_Contig10312:3523..43491680789171.980266-UTR-D-mesarthrocarpus_Contig10312:3523..4349Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10312 3524..4349 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789171.9403086-CDS-D-mesarthrocarpus_Contig10312:1579..18061680789171.9403086-CDS-D-mesarthrocarpus_Contig10312:1579..1806Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 1580..1806 +
1680789171.953165-CDS-D-mesarthrocarpus_Contig10312:2193..25271680789171.953165-CDS-D-mesarthrocarpus_Contig10312:2193..2527Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 2194..2527 +
1680789171.9656255-CDS-D-mesarthrocarpus_Contig10312:3001..35231680789171.9656255-CDS-D-mesarthrocarpus_Contig10312:3001..3523Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 3002..3523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10312.4.1

>prot_D-mesarthrocarpus_Contig10312.4.1 ID=prot_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=361bp
MPSHIGGDGHPEPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQ
EEVESHFCPCCNSLWQGTEAQAHGNRCLQCFECPCCGCVLAPFPVSPLSP
GTSEYCLLCSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLL
GAAKLRQREGKALSEKTSTRHRPTRSARGAAIEGPWRLTDLENMLNKKAD
WMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRV
ATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPI
GVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDASKVN
VLLLLLLPLL*
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mRNA from alignment at D-mesarthrocarpus_Contig10312:988..4349+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10312.4.1 ID=mRNA_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3362bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:988..4349+ (Discosporangium mesarthrocarpum MT17_79)
CCTCGGTCACGTTGCAGTCCCACTTCGTCGAGTAGCCATCCCAGCAATTG AGGGCCTTGTATGGCGTTCGCGCTCCGTGTCGGATGATGAGCTGCACCTG ATAGTTCATGGTTAGTGCGATGAATCGGGGTGAGTGTTCCATCCCAGTTG CCACGGGATGACTCTCCTTACATCGTCGGCCAACCTAACCTGCATAAGTT CGACGTCGTTCACGGTCACATTCCCTCCGAACGAGGCAGTCACGGACTCT GACAGGGGAGGGATTGCCAAGAGCGCCATGTCGGTCGCGCAGTATGCCGG CATTATCGACGGCTGGAAGGCCCCTCCGAGCTGCCATCCCAATGATACGA AGGCAACAAAAAGCAAGACACTCTGCACGCAGGACTGCGACATAGCTGTG AGCTCTCTCTTGACCCCCTGGGAGCCAACGTTTTCCCCCGAACTTACGAC AAGGTCGACCTCTAGTGAAAAGAGTGGATTAGCCCTCGTTTGTCCTGGGA ATTTTTCAAAAAAAAATATCTGGGAACTGGGAATCTACTTGGGCTGTTTG GTAGATATACGCGGCTGTTCGTTGACTTGGGAAACAGAGTCCATGCCTTC ACACATTGGAGGCGATGGCCATCCAGAGCCCGACGTGGAAGTTCTCTACG GGGACTATAATGGTCACATGCGGCCGCTGGGCCGCATGCACTTCTCCCAG GACAGCAGATGCTTGGTCTCAGACCACCCTGAGTCGGTACAGGAGGAGGT GGAGTCGCATTTCTGCCCGTGCTGCAACTCTCTGTGGCAGGGCACAGAGG CCCAGGCCCATGGGAATCGGTGAGTTTGAGCACCCTGGACAGATTGTTCT GTTGCTGGCCTAGGTAAGGCCTTATTGTATCATTTTGGGTGGCGTGGCTG AAAGCTCGATACGCTGCCCGTCGAGACCAGGGTGCGCTTAAGCTACTATC CCACGTTGAACACTTCGCAAAGCGTGACAGGAATGCTGCAGCATTGGAGA AATACGGAGAGCCTAAGAGGAGAACTAACAATGTCAGATCCTCGAAAAAC GGTACATCGCAATATTATTTTCTGCATTCCCTCTCCGCAGACACCTCGTC TAATTCAGCAGTCGTTCATCCCATTCCCAAACCTTCCCAGAGACCTCAGT TTCTTCAACAGCCGTCGATACCAACCCCCAACCCCGTGTTATCATTTCAT TGCTAGGTGCCTTCAATGCTTCGAGTGCCCATGCTGCGGCTGCGTCCTTG CGCCGTTTCCGGTGAGTCCCCTCTCGCCAGGCACCTCAGAATATTGCTTA TTGTGCAGCTATTGTCGGTGGTCGAGCCAGGAGGCAGGGCTCGTCGAGAA GGAACCGACAGCCCTCGTGACTGCCGCTTTCGAGGGAGAGAAGCAGCGCT CGGCGCAGGCAGCTTTCCTCAAGCTGCTTGGCGCCGCTAAGCTGAGGCAA CGAGAAGGCAAGGCCCTGTCAGAGAAGACTTCCACCCGACACCGCCCGAC ACGGTCGGCGAGGGGCGCGGCAATAGAAGGGCCTTGGAGGGTAAGTGAGC TGTTTCTTGTTACATAAATCACGCCCAAGCGGAGGAACGTTTCGCAGTGG GCCGTTCTTGTCTTGTCCTTTTGTTTTTGTTGAAAGGTCGCGCTGAGCAT GAATGCCCACAACCTGTCTCCGCGTTTTGTGATCCTCCTTTCGCTTTGTT GCTGCACTGAAGTGGGCCTGGAAAAAGATGCCTCCCCTCCACACTTCAGG ACCTGTCGACTGTGACAACTAAACTGGCCAATAACTGACCAATTTCCTTG AGCACCAACGCAAGATTATCGCGACCAGGCTATCTGACCCTTAATCTGGG TCAAAATTCCACTTTCGCCCAAGCTCCGCACATGACAAGACCCACAGCAC AGAGAAGCACAGTGCAGAACATGCAATCCCCTAATTCTTGACCCCCCCCC CCCCTCCCGTACATGTACCTCTCTCCATGACTATTTGGTGCCCCACACTC GCTGCATAATACAGTTGACCGACCTGGAAAACATGCTCAACAAGAAAGCA GACTGGATGACTGCTGCCTCACGCAATCCTCTCCCCCCCACACCCTTGAG CTTGATGATACATGCCCAACCCGGGGTGGGGGCGGGAGGGGTCGGAGCGC CCCAGAGCGTCTCCCTGAGGGAGAGCTCTGGGCCAGAAGAAAGGCTCCGT GTTGCGACATCTGGTCAAGCAGCTGCAGGGCTCCCTGAGAGGGTAAAGCG GGTGTTGATGGAGATCACACCCTCAAACAAGGCCCCGGAGTCTGGGGAGA CAGGGTCGGGCTCTGGGGTGGCAGAATCTGTGGTCGTGGCTCCAGGGCCC ATTGGTGTTGGTCATGTGGCGCGATGGCCGCAGAGAGTTAAACTGCGGAC ACAAATGGGAAAGCGGTGCCGGAAGGATCTTGCTGCTGGACGGACAGGAA TCTTAATGAAGCCGTGCATTGACCCTCTCCAGGGGGATGCCTCCAAGGTA AATGTACTATTGCTATTGCTGCTACCATTACTTTGAGGGTTAGGGTCAGG GTTATTGAACATGGAGTGTACAGAACAGTACTGTACTATACTGCACGTAA TCATAGAGGGAAAAGGTTATTGGCATGGGTGATGTTATGGCAATGCATGC AATGAGCTCTTGACAGTTGGCCTACCCGCTGCACTGCAGTGGGGACGAGG GACGTGTGAAACTGAAACCCAATGATGTCTCAGGTAGGAGCTCCAGAGCT TTATAAATATTTCAGGTAGAGCTCTGGAGCCGTGAGAATGTTTCAGAGCT GAAGCCGACATATGCAGTCCACAGTTGATTAGTTGATGCCATTTGCAGTT TTGTGACAGCTCTCTGACTGTCGCATAGCTCCTGCTTGCCAGCCAGCCCT GTTGCTTTGTTGTCTTGGTTTCAGTGATTTCAGTCCCGTTGAGGCAAGCA ACATCTCCGCCAGATGGATGGAAGATGCTCGACGCCTGCTCGACAGAAGG GCCCTCTGTAAGGTGGCTGCTTTGCCGCAGCGGAGGAGGAGTGCGGGTTA TGTGATCGCTGTCACCCGCTGAACAGCCCTGCGCTTGGATAAAAATATAT GTATGTGAATGGGGGGGTGGGCACAGGTCACCCCCTCGCCTTCATCAGAC ATCTGTGGCTTAGTCGTGCTTTGTGAAGAAGTCCTCGTCGGCTGTGGTGT TTCTTCTGCCCCCTTCCCCTCCTCCCCCCTGGCAACAAGACTGGACCCCG ATCAACTGAAACCCATGTCGAGAATGAAAGCACCCCCCCCCCTGACCCTA GTCCCTCCTCCTCTCCCCCCCCACCCCCCGCAGGCACAGCGGGAGTACCC GAAGGAGGGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10312:988..4349+

>mRNA_D-mesarthrocarpus_Contig10312.4.1 ID=mRNA_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1083bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:988..4349+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCTTCACACATTGGAGGCGATGGCCATCCAGAGCCCGACGTGGAAGT
TCTCTACGGGGACTATAATGGTCACATGCGGCCGCTGGGCCGCATGCACT
TCTCCCAGGACAGCAGATGCTTGGTCTCAGACCACCCTGAGTCGGTACAG
GAGGAGGTGGAGTCGCATTTCTGCCCGTGCTGCAACTCTCTGTGGCAGGG
CACAGAGGCCCAGGCCCATGGGAATCGGTGCCTTCAATGCTTCGAGTGCC
CATGCTGCGGCTGCGTCCTTGCGCCGTTTCCGGTGAGTCCCCTCTCGCCA
GGCACCTCAGAATATTGCTTATTGTGCAGCTATTGTCGGTGGTCGAGCCA
GGAGGCAGGGCTCGTCGAGAAGGAACCGACAGCCCTCGTGACTGCCGCTT
TCGAGGGAGAGAAGCAGCGCTCGGCGCAGGCAGCTTTCCTCAAGCTGCTT
GGCGCCGCTAAGCTGAGGCAACGAGAAGGCAAGGCCCTGTCAGAGAAGAC
TTCCACCCGACACCGCCCGACACGGTCGGCGAGGGGCGCGGCAATAGAAG
GGCCTTGGAGGTTGACCGACCTGGAAAACATGCTCAACAAGAAAGCAGAC
TGGATGACTGCTGCCTCACGCAATCCTCTCCCCCCCACACCCTTGAGCTT
GATGATACATGCCCAACCCGGGGTGGGGGCGGGAGGGGTCGGAGCGCCCC
AGAGCGTCTCCCTGAGGGAGAGCTCTGGGCCAGAAGAAAGGCTCCGTGTT
GCGACATCTGGTCAAGCAGCTGCAGGGCTCCCTGAGAGGGTAAAGCGGGT
GTTGATGGAGATCACACCCTCAAACAAGGCCCCGGAGTCTGGGGAGACAG
GGTCGGGCTCTGGGGTGGCAGAATCTGTGGTCGTGGCTCCAGGGCCCATT
GGTGTTGGTCATGTGGCGCGATGGCCGCAGAGAGTTAAACTGCGGACACA
AATGGGAAAGCGGTGCCGGAAGGATCTTGCTGCTGGACGGACAGGAATCT
TAATGAAGCCGTGCATTGACCCTCTCCAGGGGGATGCCTCCAAGGTAAAT
GTACTATTGCTATTGCTGCTACCATTACTTTGA
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