mRNA_D-mesarthrocarpus_Contig10312.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE) HSP 1 Score: 137 bits (346), Expect = 3.180e-30 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 136 VEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVS------PLSPGTSEYCLLCSYCRWSSQEAGLVEKEPTAL 480
VEVLYGDYNG++RPL M+FS DSRCLV+DHP SVQEEVESHFCP C S ++ +A + NRC CF VL P PVS S + YCL C YC+W+S+++GLV ++P L
Sbjct: 2 VEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAVSTENRCPHCFECPCCRCVLVPSPVSLDRSASSFSSAGTSYCLRCLYCQWTSEDSGLVAQDPAGL 122
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: D7FRF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF1_ECTSI) HSP 1 Score: 132 bits (333), Expect = 9.520e-29 Identity = 115/354 (32.49%), Postives = 162/354 (45.76%), Query Frame = 1
Query: 136 VEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSEYCLLCSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQRE--------GKALSEKTSTRHRPTRSARGAAIE-----GPWR-LTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRE-SSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARW---PQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDASKVN 1143
EVLYGDYNG++RPL M+FS DSRCLV+DHP SVQEEVESHFCP C S ++ +A + N A P PL + RWSS L + P+ +G+++ ++ ++ GA G A +T+ + R ++ GP R ++DL+ + ++A + AASR+ P P P A +LRE ++GP+ L +SG AGL ERV+ P + P G+ P+RV+LR ++GKRCRKDLAAGRTGIL+K +PL GD+S
Sbjct: 2 AEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAMSAENSGPARTRASSHRTQRALAPPRPLERRRVAVATGAAR-RWSS---ALCSRRPS-------KGKRRPPSERGRRRVEGAXXXXXXXXXXXXXVPGFAPGARTAVAAAAAKWIRRCSLRRRVRPGPGRHVSDLDEAVARRAQVVVAASRSVALPRP--------PAATAAAAAVSPPWALREDTTGPDPALWTLSSGHETAGLAERVEG------PWSSPPRQSPPARGARXXXXXXXXXXXXXXXXXXXXXXVPRRVRLRARVGKRCRKDLAAGRTGILIKATFNPLDGDSSTAK 330
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: W7T460_9STRA (Dynactin p62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T460_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.360e-20 Identity = 104/357 (29.13%), Postives = 154/357 (43.14%), Query Frame = 1
Query: 133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLS---PGTSEYCLLCSYCRWSSQEA-GLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHR------------PTRSARGAAIEGP------WRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLME-ITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
DV+V++ DY G PL + +S S+CLVS HPES EEVES +C C + + EA + +RC +CF L V S + Y C YCRWSS ++ GL+E P AL+ + E + LL LRQR A++ + RH PT + + GP W L+DLE ++ T A+ + + + EE++ T+ A + E V R +T +P G S A + P + +R P+R L T+ +RCR+D+ AGR GIL+KP ++PL+GD+S
Sbjct: 35 DVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALL--QHLRQR---AVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDG-------------------------KETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPR----GPSSQTASRSLYPP----LTSHSR-PRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSS 352
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S4MWN0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWN0_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.440e-9 Identity = 95/369 (25.75%), Postives = 141/369 (38.21%), Query Frame = 1
Query: 127 EPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPE----SVQEEVESHFCPCCNSLWQGTEAQAHGNR-------CLQCFXXXXXXXVLAPFPVSPLSPGTSEYCLLCSYCRWSSQ-----------EAGLVEKEPTALVTAAFE---GEKQRS----AQAAFLKLLGAAKLRQREG---KALSEKTSTRHRPTRSARGAAIEGPWRLTDLENML-NKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
E D VLY D+ GH PLG + + SR L S + S E++S +CP C + A R C C V A P C YC+W+S E G V KE A T A ++ + A + F KL+ R R+ K E+++T R AA EG W + LE + KK DW+ R + L+ + GPEE + + +A G P P + + + ++ ++V + + P V LR + +RCR++LA GRTGIL+KP ++PL+GD+S
Sbjct: 16 EADAAVLYVDHAGHPAPLGLCYHATASRFLSSSIDDRSSPSTLTEIDSAYCPQCLAFHDAATASGSELRGRCPKGGCRLCPLCGAVCGV-AILPEEDGDGTKHAIVYQCGYCQWTSNSCSVSAPVSVGEGGSVSKEDAAGATEALARALADRTEAVSGDANSVFAKLVAGWGERSRDEERRKRQPEESATSRRGV----SAAGEG-WGIDTLEEAIAEKKKDWLDV--RQVIDGIALTKL------------------------GPEEDVVAEVTPRADGGGPR---------------PTPAQASAQNAISPAIVSSISDL-------LPLPVPLRARKSRRCRRELAEGRTGILVKPKVNPLEGDSS 330
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S0BYA9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYA9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.990e-9 Identity = 79/343 (23.03%), Postives = 138/343 (40.23%), Query Frame = 1
Query: 133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE--------YCLL-CSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHRPTRSARGAAIEGPWRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
D VLY D+ GH+ PL +F++ V P S E++S FCP C + A ++ RC + P PL+ G E C+ C YCRW+S+E G+ K + + + + +AA KL+ +K+R E KA+ +++ +R + W E+ ++ + +P S +H V L ++ P++ S E + + + +++ NK E +V P + L+ + +RCR +LA+GR GIL+KP ++P++GD+S
Sbjct: 3 DSTVLYADHQGHLAPLSWSYFARKLSSCVDAVPPSTVTEIDSAFCPQCLHFYDTATASSNRGRCPR------PHCKQCPVCSCPLTLGIEESSKTKENFVCVFKCGYCRWTSEECGVASK-----IDFLKSADAKVAIEAATEKLILKSKMRS-EKKAVQ--LNSKDEISRDLFFQKLVDGWGDLAQEHERRRRH-----GNTYKMPSEKNSKPLHV----------LSNFVLLEKTEVPKKDFLSVPSSD------ELIAQGVRQLSSLNK-------------IEDLV--------------PLSIPLQARKSRRCRHELASGRPGILVKPKVNPVEGDSS 283
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A7S0G9X7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9X7_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.110e-8 Identity = 79/343 (23.03%), Postives = 138/343 (40.23%), Query Frame = 1
Query: 133 DVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE--------YCLL-CSYCRWSSQEAGLVEKEPTALVTAAFEGEKQRSAQAAFLKLLGAAKLRQREGKALSEKTSTRHRPTRSARGAAIEGPWRLTDLENMLNKKADWMTAASRNPLPPTPLSLMIHAQPGVGAGGVGAPQSVSLRESSGPEERLRVATSGQAAAGLPERVKRVLMEITPSNKAPESGETGSGSGVAESVVVAPGPIGVGHVARWPQRVKLRTQMGKRCRKDLAAGRTGILMKPCIDPLQGDAS 1134
D VLY D+ GH+ PL +F++ V P S E++S FCP C + A ++ RC + P PL+ G E C+ C YCRW+S+E G+ K + + + + +AA KL+ +K+R E KA+ +++ +R + W E+ ++ + +P S +H V L ++ P++ S E + + + +++ NK E +V P + L+ + +RCR +LA+GR GIL+KP ++P++GD+S
Sbjct: 3 DSTVLYADHQGHLAPLSWSYFARKLSSCVDAVPPSTVTEIDSAFCPQCLHFYDTATASSNRGRCPR------PHCKQCPVCSCPLTLGIEESSKTKENFVCVFKCGYCRWTSEECGVASK-----IDFLKSADAKVAIEAATEKLILKSKMRS-EKKAVQ--LNSKDEISRDLFFQKLVDGWGDLAQEHERRRRH-----GNTYKMPSEKNSKPLHV----------LSNFVLLEKTEVPKKDFLSVPSSD------ELIAQGVRQLSSLNK-------------IEDLV--------------PLSIPLQARKSRRCRHELASGRPGILVKPKVNPVEGDSS 283
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: A0A8B7ZAW9_ACAPL (dynactin subunit 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZAW9_ACAPL) HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5 Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 1
Query: 163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLA--------PFPVSPLSPGTSE-YCLLCSYCRWSSQEAGLVEKE 468
G P+ +++F + CL V EV+SH+CP C EA+ NRC C L+ P P P T + Y L C +CRW+S++AG+ +KE
Sbjct: 17 GLSSPITKLYFCK--HCLKLRCGRCVSHEVDSHYCPNCLENMPSAEARIKKNRCPNCLDCPSCKHTLSTRATSMALPDPSDPSKATTKKVYYLACGFCRWTSRDAGISDKE 125
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI0018DA2CAC (dynactin subunit 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA2CAC) HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5 Identity = 34/111 (30.63%), Postives = 50/111 (45.05%), Query Frame = 1
Query: 163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEKE 468
G P+ +++F + CL V EV+SH+CP C EA+ NRC C L+ S P S+ Y L C +CRW+S++AG+ +KE
Sbjct: 17 GLSSPITKLYFCK--HCLKLRCGRCVSHEVDSHYCPNCLENMPSAEARIKRNRCPNCLDCPSCKHTLSTRATSMAVPDASDPSKATTKKVYYLACGFCRWTSRDAGISDKE 125
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI00062634FA (dynactin subunit 4 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI00062634FA) HSP 1 Score: 58.5 bits (140), Expect = 2.840e-5 Identity = 39/126 (30.95%), Postives = 58/126 (46.03%), Query Frame = 1
Query: 127 EPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVL----APFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEK 465
+PD V Y G ++P+ +++F + CL V EV+SH+C C EA+ NRC+ CF L AP PV E Y L CS+CRW+S++AG+ ++
Sbjct: 6 QPDY-VRYACNCGSVKPVSKIYFCR--HCLKIRCGYCVCHEVDSHYCSNCMENPPSPEARLKKNRCMNCFDCPCCFQTLSTRAAPAPVRTAGNQNKEDAAPTPKKVYYLSCSFCRWTSRDAGIPDQ 128
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Match: UPI0014257CB4 (dynactin subunit 4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257CB4) HSP 1 Score: 58.2 bits (139), Expect = 3.420e-5 Identity = 32/111 (28.83%), Postives = 49/111 (44.14%), Query Frame = 1
Query: 163 GHMRPLGRMHFSQDSRCLVSDHPESVQEEVESHFCPCCNSLWQGTEAQAHGNRCLQCFXXXXXXXVLAPFPVSPLSPGTSE---------YCLLCSYCRWSSQEAGLVEKE 468
G P+ +++F + C+ V EV+SHFCP C EA+ NRC CF L+ S T + Y L C +CRW+S++ G+ +K+
Sbjct: 17 GIRSPITKLYFCK--HCMKLRCKRCVSHEVDSHFCPNCLENMPSAEAKIKKNRCANCFDCPSCSHTLSTRATSVAHTDTEDQKKSTTRKVYYLACGFCRWTSRDIGMKDKQ 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10312.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10312.4.1 >prot_D-mesarthrocarpus_Contig10312.4.1 ID=prot_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=361bp MPSHIGGDGHPEPDVEVLYGDYNGHMRPLGRMHFSQDSRCLVSDHPESVQback to top mRNA from alignment at D-mesarthrocarpus_Contig10312:988..4349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10312.4.1 ID=mRNA_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3362bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:988..4349+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10312:988..4349+ >mRNA_D-mesarthrocarpus_Contig10312.4.1 ID=mRNA_D-mesarthrocarpus_Contig10312.4.1|Name=mRNA_D-mesarthrocarpus_Contig10312.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1083bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:988..4349+ (Discosporangium mesarthrocarpum MT17_79)back to top |