mRNA_D-mesarthrocarpus_Contig10312.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10312.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10312.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: D8LEY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.330e-37
Identity = 65/126 (51.59%), Postives = 81/126 (64.29%), Query Frame = 1 
Query:   16 SIMPAYCATDMALLAIPPLSESVTASFGGNVT--------VQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            S  P YCA DM L +IP L +SV ASFGG V+        V  +IRHGAR PY    CW+GY+  WDCNVTE  +P +          GLF+KLYDA+P+DNAL GTCM GQL+ +G++Q+  NGR
Sbjct:   32 SSYPGYCAKDMDLNSIPSLDDSVQASFGGGVSLDDVELLQVHAMIRHGARGPYTKPRCWEGYAENWDCNVTEVVSPSLSADDGGVGATGLFRKLYDAYPSDNALSGTCMAGQLLDEGYEQEQANGR 157
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A6H5KW44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW44_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.490e-35
Identity = 65/126 (51.59%), Postives = 82/126 (65.08%), Query Frame = 1 
Query:   16 SIMPAYCATDMALLAIPPLSESVTASFGGNVT--------VQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            S  P YCA DM L +IP L ESV ASFGG V+        V  +IRHGAR P+    CW+GY+  WDCNVTE  +P +          GLF+KLYDA+P+DNAL GTCM+GQL+ +G++Q+  NGR
Sbjct:   32 SSYPGYCAKDMDLNSIPSLDESVQASFGGGVSLDDVELLQVHAMIRHGARGPFTQPRCWEGYAESWDCNVTEVVSPSLSADHGGVGATGLFRKLYDAYPSDNALSGTCMVGQLLDEGYEQEQANGR 157
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A3R7D394_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D394_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.730e-25
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:    1 GAFQPSIMPAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            GA   +  PAYCA DMA   I PL  +V  S    V VQL++RHGARTP+    CWDGY  +W+CN+ E   P+I            F+K+Y     DN   GTC +GQ+I +G  QQ+ NG+
Sbjct:   15 GAVAATSYPAYCAKDMAATKIQPLDAAVARSLQ-LVQVQLVVRHGARTPWSDRICWDGYDEEWNCNIHELECPEIVALNKTWAASREFEKVYTR--GDNVFRGTCNLGQMIDEGHSQQVFNGQ 134
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A3R6WYV0_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6WYV0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.260e-25
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 1 
Query:   25 PAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            PAYCA DM+   I PL  S TA     V VQ+++RHGARTP+    CWDGY  +W+C++ E   P+I VG         F+K+Y     DN   GTC +GQ+I +G+ QQ+ NG+
Sbjct:   26 PAYCAKDMSANKIQPLEPS-TARTLQLVQVQVVVRHGARTPWSGKKCWDGYDEEWNCSIRELQRPEI-VGNKTWAASREFEKIYTR--GDNTFRGTCNLGQMIDEGYSQQVSNGQ 136
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A6A5A2U3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A2U3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.610e-23
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 1 
Query:   25 PAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            PAYCA DM+   I PL  S TA     V VQ+++RHGARTP+    CWDGY  +W+C++ E   P+I VG         F+K+Y     DN   GTC +GQ+I +G+ QQ+ NG+
Sbjct:   26 PAYCAKDMSANKIQPLEPS-TARTLQLVQVQVVVRHGARTPWSGKKCWDGYDEEWNCSIRELQRPEI-VGNKTWAASREFEKIYTR--GDNTFRGTCNLGQMIDEGYSQQVSNGQ 136
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A397FC07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FC07_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.250e-23
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 1 
Query:   25 PAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            PAYCA DM+   I PL  S TA     V VQ+++RHGARTP+    CWDGY  +W+C++ E   P+I VG         F+K+Y     DN   GTC +GQ+I +G+ QQ+ NG+
Sbjct:   26 PAYCAKDMSANKIQPLEPS-TARTLQLVQVQVVVRHGARTPWSGKKCWDGYDEEWNCSIRELQRPEI-VGNKTWAASREFEKIYTR--GDNTFRGTCNLGQMIDEGYSQQVSNGQ 136
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: W4H559_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H559_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.730e-23
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 1 
Query:   25 PAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            PAYCA DM+   I PL  S TA     V VQ+++RHGARTP+    CWDGY  +W+C++ E   P+I VG         F+K+Y     DN   GTC +GQ+I +G+ QQ+ NG+
Sbjct:   26 PAYCAKDMSANKIQPLEPS-TARTLQLVQVQVVVRHGARTPWSGKKCWDGYDEEWNCSIRELQRPEI-VGNKTWAASREFEKIYTR--GDNTFRGTCNLGQMIDEGYSQQVSNGQ 136
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A024UJK2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJK2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.290e-22
Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:    1 GAFQPSIMPAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENGR 369
            GA   +  PAYCA DMA   I PL  +V  S    V VQ+++RHGARTP+    CWDGY  +W+CN+ E   P+I            F+K+Y     DN   GTC +GQ+I +G  QQ+ NG+
Sbjct:   15 GAVAATSYPAYCAKDMAATKIQPLDAAVARSLQ-LVQVQVVVRHGARTPWSDRICWDGYDEEWNCNIHELERPEIVALNKTWAASREFEKVYTR--GDNVFRGTCNLGQMIDEGHSQQVFNGQ 134
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A6G0XWM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWM1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.170e-22
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1 
Query:   25 PAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQIENG 366
            PAYCA DM    + PL  +        + VQ+++RHGARTP+    CWDGY+ +W+CN+ E   P++     P  +   F+K+Y     DN L GTC +GQ+I +G+ QQ +NG
Sbjct:   19 PAYCAKDMNANRVQPLKATNVQL----IQVQVVVRHGARTPWSGSQCWDGYNEEWNCNIHEIQRPELKSDKEPLIVSREFEKIYTK--GDNILAGTCNLGQMIDEGYHQQTQNG 126
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BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Match: A0A482RVD1_9ARCH (Histidine-type phosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVD1_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 1.290e-21
Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 1 
Query:    4 AFQPSIMPAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWDGYSTKWD-CNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMMGQLIQDGFDQQ 354
            A+ PS  P YC  ++A   IPPLS S  A     V +Q+I+RHGARTPY   +CW  YS  W+ CNVT+       + +       LF+KLYD   + N LGG C+ GQL+ +G+ Q+
Sbjct:   16 AWFPSFYPQYCTKNVATREIPPLSTSEQAQVDSLVQLQVIVRHGARTPYAEYSCWRNYSVVWNNCNVTDLMLASPSMTSQDRPATWLFRKLYDG--SANYLGGNCLTGQLLSEGYTQE 131
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10312.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEY1_ECTSI2.330e-3751.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW44_9PHAE1.490e-3551.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3R7D394_9STRA1.730e-2543.09Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R6WYV0_9STRA3.260e-2544.35Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A6A5A2U3_9STRA1.610e-2344.35Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A397FC07_9STRA2.250e-2344.35Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4H559_9STRA3.730e-2344.35Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A024UJK2_9STRA1.290e-2242.28Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0XWM1_9STRA3.170e-2240.35Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A482RVD1_9ARCH1.290e-2142.37Histidine-type phosphatase n=1 Tax=archaeon TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10312contigD-mesarthrocarpus_Contig10312:391..1311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEY1
PFAMsHis_Phos_2
Model size372
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K14395,ko:K19284,ko:K21403
KEGG ReactionR11527
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.11e-38
EggNOG OGsKOG3720@1|root,KOG3720@2759|Eukaryota
EC3.1.3.2
Descriptionacid phosphatase activity
Cds size351
COG categoryK
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789171.8267152-CDS-D-mesarthrocarpus_Contig10312:390..5361680789171.8267152-CDS-D-mesarthrocarpus_Contig10312:390..536Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 391..536 -
1680789171.846562-CDS-D-mesarthrocarpus_Contig10312:829..8441680789171.846562-CDS-D-mesarthrocarpus_Contig10312:829..844Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 830..844 -
1680789171.8566608-CDS-D-mesarthrocarpus_Contig10312:984..10841680789171.8566608-CDS-D-mesarthrocarpus_Contig10312:984..1084Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 985..1084 -
1680789171.8670504-CDS-D-mesarthrocarpus_Contig10312:1200..12901680789171.8670504-CDS-D-mesarthrocarpus_Contig10312:1200..1290Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10312 1201..1290 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789171.8825834-UTR-D-mesarthrocarpus_Contig10312:1290..13111680789171.8825834-UTR-D-mesarthrocarpus_Contig10312:1290..1311Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10312 1291..1311 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10312.1.1prot_D-mesarthrocarpus_Contig10312.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10312 391..1290 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10312.1.1

>prot_D-mesarthrocarpus_Contig10312.1.1 ID=prot_D-mesarthrocarpus_Contig10312.1.1|Name=mRNA_D-mesarthrocarpus_Contig10312.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=117bp
MPAYCATDMALLAIPPLSESVTASFGGNVTVQLIIRHGARTPYKALNCWD
GYSTKWDCNVTEAWAPQIGVGTPPGNMPGLFQKLYDAFPADNALGGTCMM
GQLIQDGFDQQIENGR*
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mRNA from alignment at D-mesarthrocarpus_Contig10312:391..1311-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10312.1.1 ID=mRNA_D-mesarthrocarpus_Contig10312.1.1|Name=mRNA_D-mesarthrocarpus_Contig10312.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=921bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:391..1311- (Discosporangium mesarthrocarpum MT17_79)
GGGGCCTTCCAGCCGTCGATAATGCCGGCATACTGCGCGACCGACATGGC
GCTCTTGGCAATCCCTCCCCTGTCAGAGTCCGTGACTGCCTCGTTCGGAG
GGAATGTGACCGTGAACGACGTCGAACTTATGCAGGTTAGGTTGGCCGAC
GATGTAAGGAGAGTCATCCCGTGGCAACTGGGATGGAACACTCACCCCGA
TTCATCGCACTAACCATGAACTATCAGGTGCAGCTCATCATCCGACACGG
AGCGCGAACGCCATACAAGGCCCTCAATTGCTGGGATGGCTACTCGACGA
AGTGGGACTGCAACGTGACCGAGGCATGTAGCCTCCCTCCCTCCCCCCTC
CCCGCTGTTTGCGAGTTCTTGTATTCACACCATGCACGCACCACCTGGGC
ATCAAAATTTTGCCAATCGCTGTTCATGTCCATTGTCGTATTCCCGTCCC
AACAACTCGCAGATAAGGGGCACCGCAGATTGGTAACCCTGAGCACGGTA
CGAGGCCCGCTGTAACAAAACCAGCGTAATGCCAGTTCGCCCAAATTCTG
GGGGTTCGTGGACGGGTTGTTCTCGTCCTCTTGGCGGAGGTTTCAGAGAT
GTTGCTTCCTTTGTCTCATGAAGGTCATCGAACAAACGCGAAAGACGTGG
TCGACCGAGTTCCCAAGCTCCTCGCGCACTTTTGTGCGACTTTTTTTCTG
TACGTGTTGCAGCGCTCGACTCTAAAATTCCCTTCGCTTCTGTGTTGTGT
CGCTAGGTGGTGGGCCCAAGCGCAGGCGTTGGAACTCCTCCCGGTAACAT
GCCGGGTCTGTTCCAGAAGCTGTATGATGCCTTTCCGGCGGATAATGCAC
TGGGGGGTACGTGTATGATGGGACAGCTCATCCAAGACGGGTTCGACCAG
CAGATAGAGAACGGACGGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10312:391..1311-

>mRNA_D-mesarthrocarpus_Contig10312.1.1 ID=mRNA_D-mesarthrocarpus_Contig10312.1.1|Name=mRNA_D-mesarthrocarpus_Contig10312.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=351bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10312:391..1311- (Discosporangium mesarthrocarpum MT17_79)
ATGCCGGCATACTGCGCGACCGACATGGCGCTCTTGGCAATCCCTCCCCT
GTCAGAGTCCGTGACTGCCTCGTTCGGAGGGAATGTGACCGTGCAGCTCA
TCATCCGACACGGAGCGCGAACGCCATACAAGGCCCTCAATTGCTGGGAT
GGCTACTCGACGAAGTGGGACTGCAACGTGACCGAGGCATGGGCACCGCA
GATTGGCGTTGGAACTCCTCCCGGTAACATGCCGGGTCTGTTCCAGAAGC
TGTATGATGCCTTTCCGGCGGATAATGCACTGGGGGGTACGTGTATGATG
GGACAGCTCATCCAAGACGGGTTCGACCAGCAGATAGAGAACGGACGGTG
A
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