mRNA_D-mesarthrocarpus_Contig10302.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10302.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10302.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 7.110e-99
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMDYGYPQILS+DVLR YINLGT+ SLDGDPQE+GQLTSQITGAIDWRREGIR+RKNEVYIDVLESVNLLMSSNG VLRNDVSGKV+MKTLLSGMPDCKFGLNDKL MER+   RG  DRRPAVALDDCTFHRCVRLGKFD DRTITFIPP+GEFELMR
Sbjct:  116 ETMDYGYPQILSIDVLRTYINLGTIRSLDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVSGKVIMKTLLSGMPDCKFGLNDKLIMERDGNARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMR 275
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 261 bits (667), Expect = 2.290e-83
Identity = 127/166 (76.51%), Postives = 140/166 (84.34%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGH------LDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMDYGYPQI ++DVLR YINLG++ +LDGDP ETGQLTSQITGAIDWRREGIR+RKNEVYIDV ESVNLLMSS G VLRNDV+GKV+M+T LSGMP+CKFGLNDKL ME+ A  R           + +V LDDCTFHRCVRLGKFD DRTITFIPPDGEFELMR
Sbjct:  131 ETMDYGYPQITAIDVLRSYINLGSISTLDGDPNETGQLTSQITGAIDWRREGIRHRKNEVYIDVHESVNLLMSSTGAVLRNDVTGKVMMRTFLSGMPECKFGLNDKLIMEKEALERAGGRTAATAHGKRSVELDDCTFHRCVRLGKFDADRTITFIPPDGEFELMR 296
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 246 bits (628), Expect = 1.010e-77
Identity = 116/163 (71.17%), Postives = 138/163 (84.66%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRG---HLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQ+L++DVLR +INLGTV+ LD    E   LT+QITGAIDWRR G+RYRKNEVYIDVLESVNLLMS+NG VL N+V+G+V+MKT LSGMP+C+FGLNDKL MER+++      H  ++  VA+DDCTFHRCVRLGKFD DRTITF+PPDGEFELMR
Sbjct:  115 ETMDFGYPQLLAIDVLRSFINLGTVNVLDDQDLEPNALTAQITGAIDWRRPGLRYRKNEVYIDVLESVNLLMSTNGTVLENNVTGQVIMKTALSGMPECRFGLNDKLIMERDSSASARAVHGAKKGGVAIDDCTFHRCVRLGKFDADRTITFVPPDGEFELMR 277
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A7S2D104_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D104_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.920e-74
Identity = 112/163 (68.71%), Postives = 135/163 (82.82%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAAT---RGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQI +++ +RLYI LGT  +   + Q+ GQLTSQITG +DWRREG+RYRKNEVYIDVLESVNLLM +NG +LRN+ SG+VVM+T LSGMP+CKF LNDKL+M+R AA+        +R  V +DDCTFHRCVRLGKFD++RTITFIPPDGEFELMR
Sbjct:   46 ETMDFGYPQITAIEAVRLYITLGTAKA-PVEEQDVGQLTSQITGIVDWRREGLRYRKNEVYIDVLESVNLLMGANGNILRNECSGQVVMRTQLSGMPECKFALNDKLNMDREAASGKQSAEDKKRRTVEIDDCTFHRCVRLGKFDSERTITFIPPDGEFELMR 207
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A7S4HKQ6_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HKQ6_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.850e-73
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQ  +VDVLRLYINLG V   D +P E  QLTSQITGAIDWRREGIRY+KNEVYIDVLESVNLL+SS G VLRN+V+G+V M T L+GMP+CKFGLNDKL +++ +  +    R+P V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELMR
Sbjct:  156 ETMDFGYPQNCAVDVLRLYINLGNVRPQD-EP-EPSQLTSQITGAIDWRREGIRYKKNEVYIDVLESVNLLLSSTGNVLRNEVTGQVQMNTKLTGMPECKFGLNDKLVIDKESGAQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMR 309
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A024G6X3_9STRA (MHD domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6X3_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.580e-73
Identity = 112/165 (67.88%), Postives = 134/165 (81.21%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGD-PQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPA----VALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ET+DYGYPQ  S+DVL++YINLG++ S DG    +  QLTSQITGAIDWRREGI+Y++NEVY+DV ESVNLLMSSNG VLRN+V+G+VVMKT L+GMP+CK GLNDKL M++  A    +  +      V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELM+
Sbjct:  116 ETVDYGYPQNCSIDVLKMYINLGSLSSSDGPLATQPSQLTSQITGAIDWRREGIKYKRNEVYLDVFESVNLLMSSNGTVLRNEVAGQVVMKTSLTGMPECKLGLNDKLIMQKGDAAGSKIPGQKRATRDVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMK 280
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: B7FSB1_PHATC (Predicted protein n=2 Tax=Naviculales TaxID=38748 RepID=B7FSB1_PHATC)

HSP 1 Score: 234 bits (597), Expect = 3.740e-73
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQ  +VDVLRLYINLGT    D +P E  +LTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+SS G VLRN+V+G V M T L+GMP+CKFGLNDKL +E++       DR+P+V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELMR
Sbjct:  116 ETMDFGYPQNCAVDVLRLYINLGTAKPQD-EP-EPSKLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNVLRNEVAGSVQMNTKLTGMPECKFGLNDKLVIEKDKE-----DRKPSVDIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMR 268
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A7R9WLA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLA9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.550e-73
Identity = 113/159 (71.07%), Postives = 129/159 (81.13%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELM 477
            ETMD+GYPQ  +VDVLRLYIN G+V     D  E  QLTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+SS G +LRN+V+G V+M T L+GMP+CKFGLNDKL +E+         R+P V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELM
Sbjct:  116 ETMDFGYPQNCAVDVLRLYINFGSVKP--EDEPEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNILRNEVTGGVLMNTKLTGMPECKFGLNDKLVIEKEG------QRKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELM 266
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A7S2YSX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSX5_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.280e-73
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQ  +VDVLRLYINLGT    +    E  QLTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+S+ G VLRN+V+G V M T L+GMP+CKFGLNDKL +++        DR+P V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELMR
Sbjct:  116 ETMDFGYPQNCAVDVLRLYINLGTAK--EKVETEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSNTGSVLRNEVTGAVQMNTKLTGMPECKFGLNDKLVIDKEKE-----DRKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMR 268
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BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.040e-72
Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1 
Query:    1 ETMDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREGIRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFGLNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPPDGEFELMR 480
            ETMD+GYPQ  +VDVLRLYINLG +   D +P E  QLTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+SS G +LRN+V+G+V M T L+GMP+CKFGLNDKL +E+ ++ +    R+P V +DDCTFHRCVRLGKFD DRTITFIPPDGEFELMR
Sbjct:  154 ETMDFGYPQNCAVDVLRLYINLGNIRPQD-EP-EPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEKESSGQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMR 307
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10302.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE7.110e-9989.38MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9G3_9STRA2.290e-8376.51Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A6V1NZE4_HETAK1.010e-7771.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2D104_9STRA1.920e-7468.71Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4HKQ6_9STRA1.850e-7373.13Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A024G6X3_9STRA2.580e-7367.88MHD domain-containing protein n=1 Tax=Albugo candi... [more]
B7FSB1_PHATC3.740e-7373.13Predicted protein n=2 Tax=Naviculales TaxID=38748 ... [more]
A0A7R9WLA9_9STRA4.550e-7371.07Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2YSX5_9STRA5.280e-7371.25Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2MKC8_9STRA1.040e-7271.88Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10302contigD-mesarthrocarpus_Contig10302:6..3934 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRL7
Preferred nameAP2M1
PFAMsAdap_comp_sub,Clat_adaptor_s
Model size483
Max annot lvl2759|Eukaryota
KEGG koko:K11826
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0002090,GO:0002092,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005905,GO:0006403,GO:0006807,GO:0006810,GO:0006886,GO:0006897,GO:0006898,GO:0006900,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009653,GO:0009893,GO:0009987,GO:0010008,GO:0010171,GO:0010604,GO:0010646,GO:0010647,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016055,GO:0016185,GO:0016192,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019904,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030100,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030163,GO:0030424,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031201,GO:0031323,GO:0031325,GO:0031410,GO:0031623,GO:0031982,GO:0032501,GO:0032502,GO:0032535,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033227,GO:0033267,GO:0033365,GO:0034381,GO:0034383,GO:0034613,GO:0035567,GO:0036019,GO:0036020,GO:0036465,GO:0042277,GO:0042886,GO:0042995,GO:0043005,GO:0043112,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043679,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044306,GO:0044325,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045334,GO:0045807,GO:0046907,GO:0048002,GO:0048013,GO:0048259,GO:0048260,GO:0048475,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050657,GO:0050658,GO:0050690,GO:0050708,GO:0050714,GO:0050750,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051236,GO:0051239,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0060071,GO:0060255,GO:0060341,GO:0060627,GO:0061024,GO:0061356,GO:0061357,GO:0061512,GO:0065003,GO:0065007,GO:0065008,GO:0070142,GO:0070201,GO:0070325,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0090066,GO:0090087,GO:0090175,GO:0097006,GO:0097458,GO:0097479,GO:0097480,GO:0097494,GO:0097499,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098693,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099003,GO:0099503,GO:0099504,GO:0120025,GO:0120038,GO:0150034,GO:0198738,GO:1900242,GO:1900244,GO:1901564,GO:1901565,GO:1901575,GO:1903076,GO:1903077,GO:1903421,GO:1903423,GO:1903530,GO:1903532,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1904951,GO:1905114,GO:1905330,GO:1905475,GO:1905476,GO:1990075,GO:2000026,GO:2000027
Exons3
Evalue4.33e-99
EggNOG OGsKOG0938@1|root,KOG0938@2759|Eukaryota
Descriptionendocytosis
Cds size477
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.980591-UTR-D-mesarthrocarpus_Contig10302:5..111680789170.980591-UTR-D-mesarthrocarpus_Contig10302:5..11Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10302 6..11 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.9949322-CDS-D-mesarthrocarpus_Contig10302:11..1821680789170.9949322-CDS-D-mesarthrocarpus_Contig10302:11..182Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10302 12..182 +
1680789171.004807-CDS-D-mesarthrocarpus_Contig10302:1594..17001680789171.004807-CDS-D-mesarthrocarpus_Contig10302:1594..1700Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10302 1595..1700 +
1680789171.0141165-CDS-D-mesarthrocarpus_Contig10302:3734..39341680789171.0141165-CDS-D-mesarthrocarpus_Contig10302:3734..3934Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10302 3735..3934 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10302.1.1prot_D-mesarthrocarpus_Contig10302.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10302 12..3934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10302.1.1

>prot_D-mesarthrocarpus_Contig10302.1.1 ID=prot_D-mesarthrocarpus_Contig10302.1.1|Name=mRNA_D-mesarthrocarpus_Contig10302.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=159bp
MDYGYPQILSVDVLRLYINLGTVHSLDGDPQETGQLTSQITGAIDWRREG
IRYRKNEVYIDVLESVNLLMSSNGVVLRNDVSGKVVMKTLLSGMPDCKFG
LNDKLSMERNAATRGHLDRRPAVALDDCTFHRCVRLGKFDTDRTITFIPP
DGEFELMR*
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mRNA from alignment at D-mesarthrocarpus_Contig10302:6..3934+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10302.1.1 ID=mRNA_D-mesarthrocarpus_Contig10302.1.1|Name=mRNA_D-mesarthrocarpus_Contig10302.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3929bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10302:6..3934+ (Discosporangium mesarthrocarpum MT17_79)
GAGACTATGGACTATGGGTACCCCCAGATCCTCTCCGTTGATGTCCTCCG
CTTGTATATCAACCTGGGCACGGTGCACTCGCTCGATGGGGACCCTCAGG
AGACCGGCCAGCTCACAAGCCAAATCACTGGCGCCATTGACTGGAGGCGC
GAGGGCATACGTTACCGCAAGAATGAGGTGGGCTGGGGCTGGGGCCGGGG
TCTTCGAAGTGAGGTTAAGGGATGTACATCAAGTATGTGTTTGCTGGAAA
AGAAAGTGGTGTGCCAGGGTTGTAGCGGCTAGAGTCAGCTCCCCAGATGC
CCAGAGTCTCCACACCAATATCTTCGCTGCCTCCGCCAGACCCAACGCCC
CCCCCCCCTACAAAACCCCCGGGCATAGTGTCATATTCCTTGGCAGCGCC
ACAGGATGGGAGTGGGAGTGGAGGTGGGGTATTGACCCTTTGCTGTGCCG
CCCTGCCCTCCCTCCCCATGGAGTTTGAGGCGGCCATTTTTCAGTAGGCC
CACGGGATGGAGGAAGACCACCCATCACCGACAACCCGAGGTTTTCCAGG
GTGAAACTAAGCAATAGTTGTCACTTCCATTTCATGAGCCCCTGGCAGCC
AGGATTCAGGGGCAACACTAACAGGGGGGCACAATGCATGAAGCAGCGGC
AGCAGCAGCTGCGGCCCTGCATTTCTGTTGTGGCTGGGATGGGCCCTGAC
TTCTCCCACAAGGGGGATATATATTTCTCACCGCTCCTTGAGAAAATGAG
GTCCGGGAGCTCTGATCGGGACTGTCAAAACTGAGTGGCCATGACCCTAA
CCCTAATCCTTTGCGAGGGAGAGAGCACTGCAGAAAAAAAATAACTAGAG
GCGTAATGCAGAGTATGCTTCATGTTAATGTGCGCAAAGCAAGCCAATGA
GAGAGGAGGAGGGAACTGATCCTTTACAGGGCAACCCCAGCAAGTTTCAC
ACCGTCTTGCCCAACACACACACACACACATACATGGGCATCCACACATA
CATACAGACACACATGCACACACGCTCGTACATGTACACACATACATAAG
TCATACATGGTAAAAGTCCCGGGCCATCTCCCCCCCCGCTTGGCAACGGC
TTTTGACGTTGGGTTTGCTCCTCCTCCTTCCCTCTCTTTGGCCTCCCCCT
ACGCACGGAGTTGTTGATCATCGGAGGGGTCACTGTCAGCGGACCTGTTT
CACTGGCCCCCTCACCGCGATTGCACCGCTTCTCGAAAGAGTGAGGGAAC
TGACCAGAAGCGCTCCCCAGTACCAAGCACCGCACGCCGCCTTTTGAGGG
CTGTTGCGTGGGGGTTGGGCCAGCAAGGGCTTGCCTTGCACGTCGCATGA
GTTGGCCGAACTCTTTCTCGATGGCGCAATTCTCCTACTCTACGGACTTT
GAGGCTGCCCCCGCTTTGACTCGGACTCTCCATGCCCTCAAGAGTACGCC
CTAACCCTGACCCCAGGGGCGGGGCCACGTAGAAATTATCACCCACCCCT
GCCCTAACACCATGCCATGACCTGCATCTCCCGTGCTCAATTAAATTGGG
GGGATGTCGACAACGATGATGGCGGTGGCGATGGAGCAGGTGTACATTGA
TGTGCTGGAGTCAGTCAACCTCCTCATGTCCTCTAATGGCGTGGTCTTGA
GGAACGATGTGAGCGGCAAGGTGGTGATGAAGACCCTCTTGTCTGGTGAG
AGTAGCAACCTGTACAGTGCAGTACTGTCATTGGCTCGAATAGACATTTG
CTCCGTAGCGCTCTGTAGCAAAGATAAGAGCAGCTATCATTTTAAAAATC
AAACAGGTATACCGTGTTATATAAATCAAACGGTATGCCATTTTTTTTAT
ATTGAATGGTATACCGTTTTTTGAAATCAAATGGTAAACCGTTTTCATAT
TTCATGGCATGCCAGTACAGCGCTTCCTTGTGCGTGGTAGAGGAGTAGTC
CACCCCCTATGCCTAAACCTGAAGCTGTCATCTCGGCTGACCCTTCATGG
GTTTGTCAAGGTGTGATGTGCTTTTGTTTGCCTGACATTATCCCCTGTGC
TACGTGGCACCTCGTAGCGCCTCAGAGTGGTTGGGAAACCCCTCCCAGGC
CCTCCATGCTGTGGGGAGCAAAATGTGGATTGCTTGATAAATGATGTCGA
AAGTTGTGCAGACTCTGTATCAATAGCCAGTATAGCCAGTACCAATGCCA
ATACCTATTCCCATACCCATACAAACACCAATACCATCCCTTACCAACAC
CAATACCAAGTTGTGCAGATTATGTATCGATAACCAGTATAGCCAATACC
AATACCAATAGAGCTCTATGTACACAGTTGGTGTAAGGAAAGGGTTAGAG
CTATCATTGCCTCAATATTTCCACCTGCTTTTGAAGCCCATGCACTTGTT
TTGAGGAAAGATCGAGAGTCAGCAGCCCCCTGGCTAAGGGCATAGAGCTT
AAGAGATACTGATACTTGATGCTGAAGCCTTAGGTCATCTCTTAAGCTGG
AGAAAACTTACCAAATGGATATCTTGGAACTCCTTCTCTTTGTACAAATA
GTTCAAAAAAAAATCCAAAAAAATACCTTCACATGAATCTCTGAGTAGAT
TTGTGCAGTTTGGGCTGTTCCACACAAAAAATGACCCAAAGATGACCTGC
CCTAACCTGTAAATATGTATATTCGAAATCAATGAAAAATTTGCAAAATA
TAACTCAAAGCTGTTAGCTGTATCTCCTGTTCAAGGAAGTGTTAAACCAT
CATACACATCACAAGAAAGCTCGAAGAGAGATCTGTCTGCGTATGCATAG
ATACAGGCTCCTCCAAGTGCACCAGTCACTTGGCACATCGTTAAAGATTT
TTCTTAAATGTTTACCAGGCAAAAAGAAGTTATCCAGCTTTAAAGATGGC
CTTGTTGTTAGGATTAAGGTAAGGGCTTGGAAGATGATTCATGGCTATGC
AAGCTTGTGTATTGTCTGGCCTCTGAGAGCACATGTATTGCCTGGAAAGG
TCACCTAAACCCTAACCCTGAGCCTGGTGGGAGTGTTACCGCTCGAGGCG
TCAACATCCTGGGGTTGACGGTCGGCAGGGTCAGGGTCAGGGTGGACATA
ATATACATGCCTGGTGGAAGTGCTGGTGTGTGCAAAAGATATTGCCATCA
TTGTTGAGTGTTTTATTTGGTTGGACAATAGTGCCTTGTTGAACAGGGAA
AAGCAAGGAGATGGACAGTGGTCCTAAATTGATGATCTTGGTGGGAGCTC
TCCATGATCTGGGCAGAGTACATCAGGACTTTTAAGTGATTCAAAGCAAG
AAACATCAAGGATGGGTGGGTACTTGTGCGGCAAGGTGGACGATGATCTA
CTCCGCTACTGTATGCACTGTTTGTTGTAGTGAGGGTTTTATTCATGGCT
GGGCCACCCCCCTAACACTAATCCTACGATGGGGTGGCAACTCCCTGCCC
AGCACTTGTTCCAGTTTCTCTGTCCATCTATCTGGACCAACAGAGAGGCA
TGTGCCCCCTGTGCTACCATTGGTCCCTAACGTGCCCCCATCCTCCCCTA
GCCCTAACTCTGCCCCCCCTCCTCCCCCACTCCTGTCTCTCTCCCGTCTT
TCCTGCCTCTCCTGTCTCTTATGCTATCTCTCTCCCGTCTCTTATCCCAT
CACTCTCCCATCACTCTCCCATCTCTCCCGCCTCTCCTGCCTCTTATGCG
CTGACCGTGCCGTGGATGTGCCGCAACAGGCATGCCAGACTGTAAGTTCG
GGCTGAACGACAAGTTGTCCATGGAGCGCAACGCGGCCACAAGGGGCCAC
CTTGACCGGCGGCCAGCGGTGGCCCTGGATGACTGCACCTTCCATCGCTG
CGTTAGGCTGGGGAAGTTCGACACGGACCGCACCATCACCTTCATACCGC
CTGACGGGGAGTTTGAGCTCATGAGGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10302:6..3934+

>mRNA_D-mesarthrocarpus_Contig10302.1.1 ID=mRNA_D-mesarthrocarpus_Contig10302.1.1|Name=mRNA_D-mesarthrocarpus_Contig10302.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=477bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10302:6..3934+ (Discosporangium mesarthrocarpum MT17_79)
ATGGACTATGGGTACCCCCAGATCCTCTCCGTTGATGTCCTCCGCTTGTA
TATCAACCTGGGCACGGTGCACTCGCTCGATGGGGACCCTCAGGAGACCG
GCCAGCTCACAAGCCAAATCACTGGCGCCATTGACTGGAGGCGCGAGGGC
ATACGTTACCGCAAGAATGAGGTGTACATTGATGTGCTGGAGTCAGTCAA
CCTCCTCATGTCCTCTAATGGCGTGGTCTTGAGGAACGATGTGAGCGGCA
AGGTGGTGATGAAGACCCTCTTGTCTGGCATGCCAGACTGTAAGTTCGGG
CTGAACGACAAGTTGTCCATGGAGCGCAACGCGGCCACAAGGGGCCACCT
TGACCGGCGGCCAGCGGTGGCCCTGGATGACTGCACCTTCCATCGCTGCG
TTAGGCTGGGGAAGTTCGACACGGACCGCACCATCACCTTCATACCGCCT
GACGGGGAGTTTGAGCTCATGAGGTAG
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