mRNA_D-mesarthrocarpus_Contig103.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: A0A1S4DLZ4_TOBAC (uncharacterized protein LOC107831196 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4DLZ4_TOBAC) HSP 1 Score: 65.5 bits (158), Expect = 3.350e-9 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRG-QSKRVVIKIVFLVAVARHHQLSNGVWL-DGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPV 270
+ VH+D +++ MS+ KF + P E PNP R +SK + K++F+VAV R +G L GKIG F ++SKNR AGT+EIKP+
Sbjct: 79 NYVHIDEKWFFMSKKSEKFYLLPEEQEPNPYRSCKSKNFITKVMFMVAVVRPRLAKDGTELFSGKIGIFPFVFKEPAKKNSKNRVAGTLEIKPI 172
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI00053FB287 (uncharacterized protein LOC104908611 n=4 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FB287) HSP 1 Score: 64.7 bits (156), Expect = 9.290e-9 Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRGQSKRVVIKIVFLVAVARHHQLSNG-VWLDGKIG-FSGHRDHDVNRSSKNRAAGTIEIKP 267
+LVHVD +++ MS+ ++ + PGE P R +SKR ++KI+F+ A+AR H NG V DGKIG F + RSS NR AG IE KP
Sbjct: 3 NLVHVDAKWFCMSKISQRYYLAPGEVEPYR-RCKSKRFIVKIMFIAALARPHITVNGEVSFDGKIGIFPFIEEVAAKRSSCNRDAGVIETKP 93
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI000F61069A (uncharacterized protein LOC113760017 n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F61069A) HSP 1 Score: 63.2 bits (152), Expect = 5.050e-8 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRGQSKRVVIKIVFLVAVAR-HHQLSNGVWLDGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPV 270
++VH+D +++ M++G K+ + P E+ P +SK+ ++K++FL AVAR S DGKIG F R+SKNR AGT+E KP+
Sbjct: 172 NMVHIDEKWFYMTKGSEKYYLHPEEEHPMRTC-RSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPI 263
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 9.050e-8 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHK-FIRPGEDIPNPPRGQSKRVVIKIVFLVAVARHHQLSNGV-WLDGKIGFSGHRDH-DVNRSSKNRAAGTIEIKPVTM 276
+ VHVD +++ ++ K ++ PGE+ P+ +SKR + K++FL AVAR + + V W DGKIG + RSS+NRAAGT+ KPV++
Sbjct: 111 NTVHVDEKWFFATKISKKMYLAPGEEPPHRTC-KSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSV 204
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: A0A6G0WA19_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WA19_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.070e-7 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 3
Query: 300 VINYFITTVKATISGVSTRDIFA-DDTTLHGK--DGVIEAIEAAAGDNIILESQSANSPDLNVLDLGCFHSVQQLKDDLMVTNAKELVKATVEAFGQYPQETLQ 602
VIN I +KA+ + R + D+ T HG D + A+ + G +L Q NSPDLNVLDLG F S+Q L+ M ++++AT+ AF E L+
Sbjct: 44 VINKVIPAIKASFPSANKRVVLQHDNATPHGSITDAELAAV-STGGRQFVLRRQPPNSPDLNVLDLGFFASIQSLQYKTMSRTVDDVIRATLSAFNDLSYEKLE 146
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI000900EE06 (uncharacterized protein LOC109134360 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000900EE06) HSP 1 Score: 59.3 bits (142), Expect = 1.250e-7 Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 3
Query: 426 GDNIILESQSANSPDLNVLDLGCFHSVQQLKDDLMVTNAKELVKATVEAFGQYPQETLQHCW 611
G +I L +Q A SPD+NVLDLG F+++Q LKD + + K+LVKA +AF Y + H W
Sbjct: 8 GFDIRLINQPAQSPDMNVLDLGFFNAIQTLKDQIAPRSVKQLVKAVNKAFDNYDPKLCNHIW 69
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI000B776627 (uncharacterized protein LOC110728661 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B776627) HSP 1 Score: 61.2 bits (147), Expect = 1.300e-7 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRGQSKRVVIKIVFLVAVARHHQLSNGVWL-DGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPVT 273
+ +H+D +++ M++G ++ + PGE P +SKR V K++FL AVAR ++G + DGKIG F R R S+NR AGT+E+KPVT
Sbjct: 3 NTIHLDEKWFYMTKGTQRYYLLPGETQPYRTC-KSKRFVTKVMFLCAVARPRFNADGECIFDGKIGMFPFVRWVPAKRRSRNRPAGTLELKPVT 95
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI000B78B07A (uncharacterized protein LOC110692558 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B07A) HSP 1 Score: 61.2 bits (147), Expect = 2.240e-7 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRGQSKRVVIKIVFLVAVARHHQLSNGVWL-DGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPVT 273
+ +H+D +++ M++G ++ + PGE P +SKR V K++FL AVAR ++G + DGKIG F R R S+NR AGT+E+KPVT
Sbjct: 162 NTIHLDEKWFYMTKGTQRYYLLPGETQPYRTC-KSKRFVTKVMFLCAVARPQFNADGECIFDGKIGMFPFVRWVPAKRRSRNRPAGTLELKPVT 254
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: A0A6P6UZX5_COFAR (uncharacterized protein LOC113715904 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6UZX5_COFAR) HSP 1 Score: 60.1 bits (144), Expect = 2.680e-7 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHKF-IRPGEDIPNPPRGQSKRVVIKIVFLVAVAR-HHQLSNGVWLDGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPV 270
++VH+D +++ M++ K+ + P E+ P +SK+ ++K++FL AVAR S DGKIG F R+SKNR AGT+E KP+
Sbjct: 60 NMVHIDEKWFYMTKESEKYYLHPEEEHPMRTC-RSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPI 151
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Match: UPI0007EEFD65 (uncharacterized protein LOC108203252 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EEFD65) HSP 1 Score: 59.3 bits (142), Expect = 3.130e-7 Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 1 SLVHVDGRFYVMSQGGHK-FIRPGEDIPNPPR-GQSKRVVIKIVFLVAVARHHQLSNGVWL-DGKIG-FSGHRDHDVNRSSKNRAAGTIEIKPV 270
S+VH+D +++ M++ K ++ P E P P R +SKR + K++F+ AVAR ++G + DGKIG F ++ R+SKNRA G +E+KP+
Sbjct: 28 SIVHIDEKWFYMTRISQKDYLLPSE--PEPHRISKSKRFITKVMFISAVARPRFDNDGNCIFDGKIGIFPFTKEEVAVRTSKNRANGVMELKPI 119 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig103.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig103.4.1 >prot_D-mesarthrocarpus_Contig103.4.1 ID=prot_D-mesarthrocarpus_Contig103.4.1|Name=mRNA_D-mesarthrocarpus_Contig103.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=82bp MSQGGHKFIRPGEDIPNPPRGQSKRVVIKIVFLVAVARHHQLSNGVWLDGback to top mRNA from alignment at D-mesarthrocarpus_Contig103:31247..31925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig103.4.1 ID=mRNA_D-mesarthrocarpus_Contig103.4.1|Name=mRNA_D-mesarthrocarpus_Contig103.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=679bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:31247..31925+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig103:31247..31925+ >mRNA_D-mesarthrocarpus_Contig103.4.1 ID=mRNA_D-mesarthrocarpus_Contig103.4.1|Name=mRNA_D-mesarthrocarpus_Contig103.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=246bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:31247..31925+ (Discosporangium mesarthrocarpum MT17_79)back to top |