mRNA_D-mesarthrocarpus_Contig103.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A6H5JA70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA70_9PHAE) HSP 1 Score: 220 bits (561), Expect = 9.310e-67 Identity = 119/201 (59.20%), Postives = 150/201 (74.63%), Query Frame = 2 Query: 101 SSCAQTRGSMLKHVAVTTAGL----LIGASLSPTLPAAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIETPF 691
SS + +R +L+ + AG L GA SP LPA ADN L ATK SYFRYVPRIL++M WY+GDL+QA+ EDWP V+ YFEVVNTA+SDS RPAMYQSSSS ++R+L SPL++W+QS + KGTG +RAL QE LE AM +L K A L GE++GQ A+A+WEAGRDA+++YVE+ANKG+VR LRKI+TPF
Sbjct: 54 SSSSSSRSEVLRELGRYAAGAGVLSLAGACGSP-LPALADNALAATKKSYFRYVPRILDAMAWYEGDLQQAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGQ-LRALLSQEEKLEQAMASLEKAA-SGKGLKEGESQGQAAIAAWEAGRDALQEYVEVANKGMVRSLRKIDTPF 251
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: D8LLR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR8_ECTSI) HSP 1 Score: 179 bits (454), Expect = 3.020e-52 Identity = 87/141 (61.70%), Postives = 111/141 (78.72%), Query Frame = 2 Query: 269 MKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIETPF 691
M WY+GDL++A+ EDWP V+ YFEVVNTA+SDS RPAMYQSSSS ++R+L SPL++W+QS + KGTG +RAL QE LE AM +L K A L GE++GQ A A+WEAGRDA+++YVE+ANKG+VR LRKI+TPF
Sbjct: 1 MAWYEGDLQKAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGAKLRALLSQEEKLEQAMASLEKAA-SGKSLKEGESQGQAAKAAWEAGRDALQEYVEVANKGMVRSLRKIDTPF 140
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A7S3Y028_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y028_HETAK) HSP 1 Score: 111 bits (278), Expect = 3.810e-25 Identity = 75/208 (36.06%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 134 KHVAVTTAGLLIGASLSPT------LPAAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYF--EVVNTAKSDSKRPAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKL-----------------SAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
K V V+ L GA ++ T AD +L A K YFRYVPR+ + +Y DL++A+ +DW V F EV+ S P ++S +RDL +P+TIWS +FA KG ALQ+QE LE A+ + +VA D + G+++ Q+A+ SWE GR A+ Y+EIAN GL R+L K+E
Sbjct: 34 KTVVVSRRDFLAGAGVAATGLVLAPHSVLADMSLPAAKQLYFRYVPRLNDGKSFYANDLKKAIDDQDWEAVKKTFVKEVIVQPTSKKYNPP----ATSKWDRDLTTPMTIWSSTFAEKGVSKKTTALQEQEQLLETALAKIERVAGGDLTALPTGGGFLGFGTKSEDTNKGKSQKQIALESWEEGRTAINTYIEIANFGLSRELNKLE 237
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A7S2ZQP9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQP9_9RHOD) HSP 1 Score: 110 bits (274), Expect = 1.070e-24 Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 164 LIGASLSPTLP--AAADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKRPAM-YQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLSAGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
+ G ++ LP A+A+ L+A K SYFRYVPRI E + +Y L AV A DW V F + A+ S++ ++++ER+ P+ WS SFA KGT P RA+ + +A E M L K ++ + A ASWE GR + +Y++IANKGL R+LRK+E
Sbjct: 38 IAGVAIVNGLPKEASANVNLMAAKRSYFRYVPRIEEGINYYMLALSPAVNAGDWGKVSQAFVKTSVAREGSEKALNDIDPKTTILEREFFVPMRTWSNSFAEKGTSPKSRAMLVKVDAFEKEMDKLKKATKNQNQADAS--------ASWELGRTVLNEYIDIANKGLSRELRKLE 205
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: A0A4D9DBP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP4_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.290e-13 Identity = 62/195 (31.79%), Postives = 94/195 (48.21%), Query Frame = 2 Query: 167 IGASLSPTLPAA--ADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKR--PAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLS-------------------AGETRGQVAMASWEAGRDAMKQYVEIANKGLVRQLRKIE 682
+GA+L P A A+ TL + K YFRY PRI + + D + A+ +DW V +E+ A S R P + + E+DL SP+ I+SQS + KG P + AL + E LEAA+ L VA+ D K AG + ++A A + + A +VE+ NKG++ ++ K E
Sbjct: 34 VGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIQKQAPDSSLRNNPQRFINK---FEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKGII-EVNKFE 224
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Match: W7UB75_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UB75_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.340e-11 Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 2 Query: 167 IGASLSPTLPAA--ADNTLIATKNSYFRYVPRILESMKWYQGDLRQAVLAEDWPHVMTYFEVVNTAKSDSKR--PAMYQSSSSLIERDLLSPLTIWSQSFAPKGTGPTMRALQQQENALEAAMKTLGKVARDDYKLS-------------------AGETRGQVAMASWEAGRDAMKQYVEIANK 652
+GA+L P A A+ TL + K YFRY PRI + + D + A+ +DW V +E+ A S R P + + E+DL SP+ I+SQS + KG P + AL + E LEAA+ L VA+ D K AG + ++A A + + A +VE+ NK
Sbjct: 87 VGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINK---FEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNK 268 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig103.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig103.2.2 >prot_D-mesarthrocarpus_Contig103.2.2 ID=prot_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=206bp MLSTKDSYSSCAQTRGSMLKHVAVTTAGLLIGASLSPTLPAAADNTLIATback to top mRNA from alignment at D-mesarthrocarpus_Contig103:4432..9410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig103.2.2 ID=mRNA_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4979bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:4432..9410- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig103:4432..9410- >mRNA_D-mesarthrocarpus_Contig103.2.2 ID=mRNA_D-mesarthrocarpus_Contig103.2.2|Name=mRNA_D-mesarthrocarpus_Contig103.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=618bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig103:4432..9410- (Discosporangium mesarthrocarpum MT17_79)back to top |