mRNA_D-mesarthrocarpus_Contig10297.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A6H5J803_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J803_9PHAE) HSP 1 Score: 252 bits (643), Expect = 4.170e-74 Identity = 155/302 (51.32%), Postives = 192/302 (63.58%), Query Frame = 1
Query: 28 SCRRKLEVELQSVLEEESRLDEEVRLLLKARSLPENGGLYPYAPAAVTGV---------------------------GDGEEVEDSVNN-------------SQGGLEQCLAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELAASV-DGAGLATQNLPGIFNVSAAFLRR 810
+ R +LE EL+++ E+E RLD EV LL+A++ P AP V+ D + +D N +GGL QCL +L SVPDFP LE +A +LLAQI+DGH MAERVS +VRRLDDIQMRVQRALA+VEDVINLRGCA+GVR AV GDL +V++F +I+AGALADS EMV+M A LS+AVLERFE AVL+MDE ++ +CPLL+PL LA R +ELYLGFARR L+ EL A DG+ ATQ+LP I+N SAAFLRR
Sbjct: 5 ASRLRLEEELRNISEQEERLDGEVNQLLQAKA----AATVPGAPEEVSQAVALSNGHXXXXXXXXXXXXXXXXXXXXXDAKTPQDVDNXXXXXXXXXXXXXXGEGGLAQCLEELSGSVPDFPGLEEKASALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAGAGDGSLPATQSLPAIYNTSAAFLRR 302
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A836CCD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD6_9STRA) HSP 1 Score: 147 bits (371), Expect = 8.700e-39 Identity = 107/283 (37.81%), Postives = 144/283 (50.88%), Query Frame = 1
Query: 28 SCRRKLEVELQSVLEEESRLDEEVRLLLKARSLPENGGLYPYAPAAVTGVGDGEEVEDSVNNSQGGLEQCLAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMASARETLSNAVLE-------------------RFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELA---ASVDGAGLATQNLPGIFNVSAAFLRR 810
+ ++ LE EL ++ + LD ++R LL G P A D E VED + L CL Q+ + PDF L G +L AQI +GH+ AERVSGAVR LD + R AL V++ + LRGCA+GVR A+A GDL V V++F Q++A AL+ S E+ EMA+ +E L VLE RFE AV + CPLL PL LAA K ++ FAR +L LA A+ AT L ++N AAFL++
Sbjct: 5 AAKQHLEEELAALEARHAELDAQLRQLLGI------GSQKQQPPDAAV---DAEIVEDGLQR----LRLCLQQVEAARPDFAALRGAGAALSAQISEGHATAERVSGAVRGLDARRARAAAALTRVDEAVELRGCAEGVRGAMARGDLGAAVHHVRRFHQLDAAALSGSAELAEMAAIQEPLRLVVLEGGGHDXXXXXXXXXXXXLSRFEAAVRADSRDGIVAGCPLLGPLGLAAAAKGPFMEFARGLLGSTLAELDAAAPAGAPATHALSALYNSCAAFLQQ 274
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A7S2WIB6_9STRA (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIB6_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.090e-29 Identity = 78/211 (36.97%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 181 DGEEVEDSVNNSQGGLEQCLAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELAAS--VDGAGLATQN-LPGIFNVSAAFL 804
+ E + + +G L Q + +F ++ G+A L QI++ ++ERVS +RRLD QM VQ ALA+VED++NL+ CAQGV A+ + DLR G+V+QF I++ A S + + A + L VL+RFE A + D V+ LL PL LA + YL FA+R + +AA G G T LP +FN + FL
Sbjct: 33 EAESILQGSGDQRGPSVSTLLQEKLEPRNFNIIAGEAAMLAEQIEESRVLSERVSRTIRRLDRAQMNVQHALALVEDIVNLKDCAQGVITALKEEDLRDATGYVRQFHDIDSVAARASADYDRIIQAEKELQTQVLQRFEEATAKADSGEVAKYVALLGPLGLAETGLQSYLAFAKREVQRIVAAGPPAQGGGDPTDGQLPALFNAAHVFL 243
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A4D9D1B9_9STRA (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1B9_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.450e-23 Identity = 69/180 (38.33%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 277 LEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELAASVDGAGL--ATQNLPGIFNVSAAFLRR 810
L + +L + +AE++S +VR LD+ QMRVQR LA+VED+INL+ CA+GV A+ + DL +V+QF IE + S + +A L VL R AV + V CPLL PL LA +Y FA R+L L V A Q LP I+N +A FL+R
Sbjct: 139 LTAKVSALTEHVYGCQELAEKMSSSVRELDERQMRVQRVLAMVEDIINLKTCAEGVARALEEDDLLDATSYVRQFHSIEGASAKASGHYNVLVAAEARLKETVLRRVHLAVSRSELDDVFKFCPLLGPLGLAKEGASIYESFAERLLKEGLDPLVAETSKLPAVQLLPKIYNTAAGFLQR 318
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A0G4F532_VITBC (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F532_VITBC) HSP 1 Score: 77.8 bits (190), Expect = 1.660e-12 Identity = 53/176 (30.11%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 226 LEQCLAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFV-------QQFEQI-EAGALADSDEMVEMASARE-TLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGE 726
++ L L+ + + A L A ++ H +E++S VRRLD ++ R++ AL +VED+++L+ CA+GV A+ GD + QQF Q +A AL DS +++ A E L+ V ++F+ A+ D+ VS L PL L Y+ F R L +
Sbjct: 54 VQSHLTGLYDVTEQQKVFQRDAQQLQATLQFVHETSEKLSSRVRRLDTVRSRIEAALQLVEDLLDLKNCAEGVESAMGRGDYETAAKHIAKYRSLAQQFRQGGDASALEDSSAVLQSLKASEKALTQMVRDQFDKAITNRDKTGVSRYAKLFYPLGLEREGINRYITFIRSFLSDQ 229
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: I2CQF7_NANGC (Oligomeric golgi complex component (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQF7_NANGC) HSP 1 Score: 70.5 bits (171), Expect = 5.560e-12 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 340 VSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMASARETLSNAVLERFENAV 609
+S +VR LD+ QMRVQR LA+VED+INL+ CA+GV A+ + DL +V+QF IE + S + +A L VL R AV
Sbjct: 1 MSSSVRELDERQMRVQRVLAMVEDIINLKTCAEGVARALEEDDLLGATSYVRQFHSIEGASAKASGHYNVLVAAEARLKETVLRRVHLAV 90
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A812XJP0_9DINO (Conserved oligomeric Golgi complex subunit 4 n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A812XJP0_9DINO) HSP 1 Score: 65.5 bits (158), Expect = 2.200e-8 Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = 1
Query: 238 LAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMV--EMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELAASV 741
L + H VP L ++ +A+ +S VR+LD + RV AL +V+D++ LR CA V +A++ D + FV +F + +D+ + A LS V RFE A+ D VS L PL LA+ Y+ F +R L + +A +
Sbjct: 47 LGEQHKQVP------AAIRKLQETLQQTSGVADELSFRVRKLDVVCSRVSDALKLVDDLLELRECADQVMKAISSEDFEQAARFVSRFRASQDSLPPGTDDATVRTLTEAERQLSAIVRRRFEAAMAAKDAAGVSRFAKLFHPLGLASEGVRKYVEFIQRSLAEKASADI 210
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A1Q9DLP7_SYMMI (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DLP7_SYMMI) HSP 1 Score: 65.5 bits (158), Expect = 2.570e-8 Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = 1
Query: 238 LAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMV--EMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVLDGELAASV 741
L + H VP L ++ +A+ +S VR+LD + RV AL +V+D++ LR CA V +A++ D + FV +F + +D+ + A LS V RFE A+ D VS L PL LA+ Y+ F +R L + +A +
Sbjct: 742 LGEQHKQVP------AAIRKLQETLQQTSGVADELSFRVRKLDVVCSRVSDALKLVDDLLELRECADQVMKAISSEDFEQAARFVSRFRASQDSLPPGTDDATVRTLTEAERQLSAIVRRRFEAAMAAKDAGGVSRFAKLFHPLGLASEGVRKYVEFIQRSLAEKASADI 905
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A2T7NIY7_POMCA (Conserved oligomeric Golgi complex subunit 4 n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NIY7_POMCA) HSP 1 Score: 65.1 bits (157), Expect = 3.010e-8 Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 217 QGGLEQCLAQLHVSVPDFPLLEGQAGSLLAQIKDGHSMAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALADSDEMVEMAS------------ARETLSNAVLERFENAVLEMDEHSV 633
Q LE + LH +P+ +LE + L + I ++AE VSG VR+LD + RV VED+++L+ C GV+ A+ + D + G V +F ++ + S E E+ + E L N V +F+ AV D SV
Sbjct: 76 QDTLESKMNGLHKMLPNLQILETDSRQLTSMISFTSTLAENVSGKVRKLDLAKSRVVECSQRVEDILDLKFCTDGVQIALQNEDYEKAAGHVHRFRNLDETVIRISAETNEVPGGTLDTSFKQLYESEEKLKNIVHSKFDAAVHCQDVASV 226
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Match: A0A7S1A9N9_NOCSC (Conserved oligomeric Golgi complex subunit 4 (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9N9_NOCSC) HSP 1 Score: 62.0 bits (149), Expect = 2.000e-7 Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 328 MAERVSGAVRRLDDIQMRVQRALAIVEDVINLRGCAQGVREAVADGDLRRGVGFVQQFEQIEAGALA---DSDEMVEMASARETLSNAVLERFENAVLEMDEHSVSLSCPLLSPLRLAARCKELYLGFARRVL 717
+A+ +SG VR+LD I R+ AL V+D++ LR CA V + + + + + +V +F + G L D + + A E LS V +RFE A+ D+ S+S L L L+ + YL F R L
Sbjct: 76 VADELSGRVRKLDTICGRITEALKFVDDMLELRECADQVMKTIQNEEFEQAAKYVSRFRACQ-GVLPPGIDDASIRVLKQAEEQLSVIVRKRFEEAMSTKDQASISRFAKLFPSLGLSGEGVKKYLEFIRHSL 207 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10297.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10297.1.1 >prot_D-mesarthrocarpus_Contig10297.1.1 ID=prot_D-mesarthrocarpus_Contig10297.1.1|Name=mRNA_D-mesarthrocarpus_Contig10297.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=267bp MTSTMLSCRRKLEVELQSVLEEESRLDEEVRLLLKARSLPENGGLYPYAPback to top mRNA from alignment at D-mesarthrocarpus_Contig10297:60..2811- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10297.1.1 ID=mRNA_D-mesarthrocarpus_Contig10297.1.1|Name=mRNA_D-mesarthrocarpus_Contig10297.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2752bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10297:60..2811- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10297:60..2811- >mRNA_D-mesarthrocarpus_Contig10297.1.1 ID=mRNA_D-mesarthrocarpus_Contig10297.1.1|Name=mRNA_D-mesarthrocarpus_Contig10297.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=801bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10297:60..2811- (Discosporangium mesarthrocarpum MT17_79)back to top |