mRNA_D-mesarthrocarpus_Contig10287.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5K7P0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P0_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 7.780e-15 Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFEVQQMQATVRNIFLDE---RMRKRTKGEIAGRVFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.210e-14 Identity = 55/198 (27.78%), Postives = 95/198 (47.98%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T + + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y ++ K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFTELKANYNRVTDEVISAKLNDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKFI----------KMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.370e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.420e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.470e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRVFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.510e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 131 DGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 310
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.510e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.520e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.570e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.580e-14 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKERLEELEELVSDGRLRGIYLKGLTPEYSYVSIIRTEYAPVKIVIRTMESCNTERMKELIRDFYTNELGAMTKSRATTSTAGNQVALKADVGSDNPRSGLCFNCHKAGHRARNCPLKK---HQTSKPK-----KWCSLHKTKKHSNEEC 570
+G A+ LKA Y T D + M+ E+PD FF + L+ +LE++ E +SD R + I ++G + +Y +K+++ S + ++M+ +R+ + +E + R AG A+ +CF C++ GH RNCP ++ H+ K K KWCS+H T HS+EEC
Sbjct: 112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYK----------DIKMMVFRDPSFDVQQMQATMRNIFLDE---QMRKRTKGQIAGRGFAMATKTSGP-----ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEEC 291 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10287.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10287.1.1 >prot_D-mesarthrocarpus_Contig10287.1.1 ID=prot_D-mesarthrocarpus_Contig10287.1.1|Name=mRNA_D-mesarthrocarpus_Contig10287.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=197bp NGIEAYQALKAKYEATTQARTMDLHDQFNQIKMDDSEDPDSFFERVEVLKback to top mRNA from alignment at D-mesarthrocarpus_Contig10287:578..1518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10287.1.1 ID=mRNA_D-mesarthrocarpus_Contig10287.1.1|Name=mRNA_D-mesarthrocarpus_Contig10287.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=941bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10287:578..1518- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10287:578..1518- >mRNA_D-mesarthrocarpus_Contig10287.1.1 ID=mRNA_D-mesarthrocarpus_Contig10287.1.1|Name=mRNA_D-mesarthrocarpus_Contig10287.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=591bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10287:578..1518- (Discosporangium mesarthrocarpum MT17_79)back to top |