mRNA_D-mesarthrocarpus_Contig10284.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10284.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10284.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: D7FRA6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA6_ECTSI)

HSP 1 Score: 926 bits (2392), Expect = 0.000e+0
Identity = 466/611 (76.27%), Postives = 527/611 (86.25%), Query Frame = 1
Query:    1 MATFWRPGTTGPGLGFVERGE--DSTHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPNTKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMRYRASTAWMGEVV 1827
            M+ FW+PGT+GPG   +ERG+  +S H+VD KL+ LPL  QR ALPI+RHR S+L+A++ +R +V+VGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAA TVA RVAEEMGSRLGE VGY+VRFD+R GP TKVKFCTDGMLLREMMLDPLL+ YSVVMLDEAHERT+YNDILFGLLKK+MRKRKELRVIVASATLDAE+FRDFFET+        TATILSI GRQHPVD+LYT++PV NYV+AAVD ALAVH+SEPVGD+L+FLPGAEEIDAAVEMLRD A    T   +      +  G GEG     LQVLP YSALP++ QMKVFEP+R GVRR+VVATTIAETS+TI  IRYV+DPGF+RLPFYDP +G+G LLTT+TSKASAKQRAGRAGRV+PGKCLRLMTE DYHA+LPA+T+PEMQR+DL WVVLLLKALGIDDILHF+FLS P+AE MIRALE LYALGALD+ C LTEPLG TMAEFPVEPCLAKFL +AW+FGCVEDALTVAAMLSVQNPF+HPRGGGRERR R++EAM+EFAVTEGDHITYLNVFNSF+E G  ++WC+ENCLN RALVRAGEIR QL RY    A  G+ V
Sbjct:    1 MSVFWKPGTSGPGG--LERGDGSESLHIVDPKLSKLPLQTQRHALPIYRHRNSVLFAVQKHRAIVLVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAAFTVATRVAEEMGSRLGETVGYSVRFDSRVGPATKVKFCTDGMLLREMMLDPLLTAYSVVMLDEAHERTIYNDILFGLLKKIMRKRKELRVIVASATLDAEQFRDFFETNTXXXXXXXTATILSIQGRQHPVDVLYTEKPVSNYVRAAVDAALAVHSSEPVGDVLIFLPGAEEIDAAVEMLRDHAPQSATSGKWGGWGGSTAKGVGEG---GPLQVLPFYSALPINTQMKVFEPTRQGVRRIVVATTIAETSVTIDRIRYVIDPGFIRLPFYDPAQGFGALLTTLTSKASAKQRAGRAGRVSPGKCLRLMTEEDYHAQLPAQTIPEMQRSDLSWVVLLLKALGIDDILHFEFLSPPAAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGGRERRERVREAMEEFAVTEGDHITYLNVFNSFDETGNDSEWCKENCLNHRALVRAGEIRQQLSRYCKKFAPPGQHV 606          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A835Z495_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z495_9STRA)

HSP 1 Score: 688 bits (1775), Expect = 1.170e-239
Identity = 368/606 (60.73%), Postives = 443/606 (73.10%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVERGEDSTH--VVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPN---TKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSF--EEVGRSAD----WCEENCLNFRALVRAGEIRNQLMRY 1794
            FW+PGT GPG    ERG D+    +VD KL+HLPL+ QR+ALPI+++ RSLLYALET+RTLVIVGETG GKTTQ+PQYLH+AGWTAG RAVVCTQPRRVAA+TVAARVA+EM         YAVRFD +       T +KF TDG+L+REMMLDPLLS YSVVMLDEAHERTV+NDILFGLLKKVMR+R +LR+IVASATLDAEEFRDFFET+  K  +  TATILS+ GRQHPVDILY + P  NYV+AA + AL++H +EP GDIL+F+PGAEEID                                                  ++QM VFEP++ G+R+V+VAT +AETSIT+ G++YVVDP FVRLPFYDP  G  +L+TTVTSKASA QRAGRAGR +PGKCLRL+TETD+++ LPART PE+QRTDL   +LLLKALG+ DI+ FDFLS P+AEA+ RALE LY+LGA+D+   +T PLG +MAE P+ P LAK L A+W FGCV +ALTVAAMLSV+ PF  PRG G E + R + AM  FA  EGDHITY+NV+N++  E  G S D    WC E+CL+ R+L RA EIR QL RY
Sbjct:    3 FWKPGTAGPGF-VQERGGDAEAPVLVDPKLSHLPLSKQRQALPIYQYHRSLLYALETHRTLVIVGETGSGKTTQVPQYLHQAGWTAGGRAVVCTQPRRVAAVTVAARVAQEMXXXXXXXXXYAVRFDEKCSKEVGRTALKFVTDGLLIREMMLDPLLSRYSVVMLDEAHERTVHNDILFGLLKKVMRQRSDLRLIVASATLDAEEFRDFFETA-DKEGDKLTATILSVQGRQHPVDILYLEAPADNYVRAAAEAALSIHETEPPGDILIFMPGAEEID--------------------------------------------------TVQMAVFEPAKPGIRKVIVATNVAETSITLDGVKYVVDPCFVRLPFYDPATGVESLVTTVTSKASATQRAGRAGRTSPGKCLRLVTETDFNSLLPARTPPEVQRTDLSGTLLLLKALGLHDIVRFDFLSPPTAEALARALELLYSLGAIDDSADITRPLGASMAELPLSPQLAKVLVASWRFGCVAEALTVAAMLSVRGPFERPRGVGAEAKQRQRSAMAAFATLEGDHITYINVYNAYCDEADGGSVDELREWCAEHCLDARSLRRAREIRGQLERY 556          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A7S2W5S5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5S5_9STRA)

HSP 1 Score: 628 bits (1619), Expect = 6.110e-213
Identity = 353/680 (51.91%), Postives = 434/680 (63.82%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVERGEDSTHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPNTKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFE---------------------------------------TSRP---------------------------KANEPD------TATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRS-GVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAK--LPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRS-----ADWCEENCLNFRALVRAGEIRNQLMRYRASTA 1809
             WRPG  GP        E  T V   K  +LPL+ QR+ LPI R+R SLLYALE YRT+V+VGETGCGKTTQ+PQYLHEAGWTAG R VVCTQPRRVAA+TVA RVA+EMG  LG  VGYAVRFD R G +T +KFCTDG+L+RE + DPLLS  SVV++DEAHER+++ D+L GLLKKV R+RK+LR+IVASATLDAE+FRDFFE                                       TS P                           K+ EP+      TATI+S+ GR HPV++ +  +P  +Y+ AAVDT +A+H  E  GDILVFLPG +E+DAAV M++D                         +  + L VLPLY+ALP   QM+VF+ SR  G+R+VV ATTIAETS+TI GI +VVD GF +LP+++P+ G  +LLT   S+ASA QRAGRAGR  PGKC RL TE  +  +  +PA T PEMQR  L W VL LKALGIDD+LHFDF+S PSAE M+ ALE LY+LGALD+ C +T P+G  +AEFP+EP LAK L ++W+FGC E+ + VAAMLSV   ++HPRG  R +R +L  AM EFAV EGDH+T LNVF  FE+          +WC EN LN RAL RA E+  QL  Y   TA
Sbjct:    1 MWRPGDDGPD----REAEFGTLVYANKHRNLPLSRQRQLLPIARYRDSLLYALEEYRTVVVVGETGCGKTTQLPQYLHEAGWTAGGRRVVCTQPRRVAAVTVAQRVADEMGRELGGTVGYAVRFDDRTGEDTAIKFCTDGLLIREALRDPLLSRVSVVIVDEAHERSLHTDVLLGLLKKVQRRRKDLRIIVASATLDAEKFRDFFEAAGRKKAKKGKATDAGGERTSAKEGGEARKGGPSTSGAHTSDPAPETARHRALAALDAAMGSTGASRGPEKSEEPEASEEKPTATIVSVSGRTHPVEVCFAAKPQKDYIAAAVDTVVAIHRQEGEGDILVFLPGMQEVDAAVRMIKDTD-----------------------VDSRTLWVLPLYAALPSHEQMRVFDRSRQRGMRKVVCATTIAETSVTIDGICFVVDAGFHKLPYFNPSTGIESLLTAPISRASAVQRAGRAGRTQPGKCFRLYTEAAFQNETVMPAATPPEMQRVSLTWAVLQLKALGIDDVLHFDFVSPPSAETMLHALEMLYSLGALDDHCRITSPVGVQLAEFPLEPRLAKALLSSWDFGCGEEMIVVAAMLSVGEVWIHPRGS-RGQRDKLDVAMAEFAVGEGDHVTLLNVFRGFEDEPEGNNQSPQEWCAENMLNHRALKRAKEVHRQLKGYLLRTA 652          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: W7TSM4_9STRA (Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM4_9STRA)

HSP 1 Score: 602 bits (1551), Expect = 2.600e-205
Identity = 329/612 (53.76%), Postives = 421/612 (68.79%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVER--GEDSTHVVD----KKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARA---GPNTKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFET-------SRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEP-SRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMRY 1794
            FW+PGT  P LG +ER  G   T   D         LP   Q+  LPI R R ++LYALE Y+T+V+VGETG GK+TQ+PQYLHE+GWT G+R V+CTQPRRVAA+TVAARVAEEMG +LG  VGYAVRFD+R    G  T++KF TDG+LLRE + DPLLS YSV++LDEAHER++Y D+L GLLKKV ++R ELR++++SAT DAE FRDFFET       S         +TI+SI GRQH VD+ Y  +   NY+++AVDT L++  SE  GD+LVFLPG EEID AV  +++  +     E                     + VLPL+S+LP  +QMK  +P SR   R+V+ AT IAETS+TI GIR++VD GFV+LP YD   G+ +L+TT  S+ASA QRAGRAGR  PGKC RL TE  + + L A T PE+QR++L W++L LKALGID ++ FDF++ PSAEA++R LE LYALGALD+ C LT  LG  MAEFPVEP LAK L A+++F C E+ALT+ A+L VQN + +P+G  RE R   + AM E A  +GDH+T L ++  +EE GRS +WC E+ LN R+L RA EIR QL RY
Sbjct:    3 FWKPGTAAPQLG-LERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALGGMENV-------------------VLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAF-STLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKG--RESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRY 591          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: L8GZI0_ACACA (PremRNA splicing factor, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZI0_ACACA)

HSP 1 Score: 593 bits (1530), Expect = 4.530e-202
Identity = 326/610 (53.44%), Postives = 412/610 (67.54%), Query Frame = 1
Query:   10 FWRPGTTGP------GLGFVERG--EDSTHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARA-GPNTKVKFCTDGMLLREMMLDPLLSTYSVVM----LDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHH--PDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMRY 1794
            FW+PG   P      G G  +R   ++   VV      L L+ QR+ LPIF++R  +LY +E Y+T+VIVG TG GKTTQIPQYLHEAGWT G R V CTQPRRVAA TVA RVA+EMGS LGEEVGYA+RFD +     TK+KF TDG+LLRE MLDPLLS YSV++    LDEAHER+++ DIL GLLKK+ RKR ELR+IV+SATL+A++  DFF T++      DTA ILSI GRQ PVDI Y ++P  NYV AA+DT + +H +EP GD+LVFL G+EE+D  VE++R RA    P   +P S                + L VLP+YS LP + QMKVF+     VR+V+VAT IAETSITI G+ YVVD GFV++  Y+P      L+    ++A A QRAGR+GR  PGKC RL TE  Y A +   T+PEMQRTDL  V+L LKALGID++L F+F + P ++ M+RALE LYALGALDE   LT+P+G T+AE PV P L K L  + E GC E+ L++AAMLSVQ  F++PR    + R  +    K FAV EGD +T+LNVFN F    ++  WC+E+ +N R ++RA EIRNQL  Y
Sbjct:   13 FWKPGAVAPEGLCGIGTGQFDRETEKEDLFVVFNANEKLSLSQQRQRLPIFKNRTHILYLVEKYQTVVIVGSTGSGKTTQIPQYLHEAGWTQGGRVVACTQPRRVAATTVAERVAQEMGSLLGEEVGYAIRFDNKTEAEKTKIKFMTDGLLLRETMLDPLLSKYSVIIASPRLDEAHERSIHTDILMGLLKKIQRKRPELRLIVSSATLEAQKLADFFNTNKTTDPANDTAAILSIEGRQFPVDIFYLKQPTDNYVHAAIDTVINIHKTEPPGDVLVFLTGSEEVDDTVELIRQRAAEIRPGDLKPGSP---------------RSLSVLPIYSGLPGAQQMKVFQTMPKHVRKVIVATNIAETSITIDGVVYVVDSGFVKIKAYNPATAMEALVVVPVAQAGADQRAGRSGRQRPGKCYRLYTEAAYRA-MRVNTIPEMQRTDLAPVLLQLKALGIDNVLRFEFPTPPPSQCMMRALELLYALGALDEYGKLTQPIGYTLAELPVGPTLGKMLLKSGELGCSEEVLSIAAMLSVQMVFVYPR----DFRNTVDAVRKRFAVFEGDTLTWLNVFNEFMRNNQTQKWCKEHYVNHRVMLRAVEIRNQLRAY 602          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A8J1UW50_OWEFU (Ofus.G201261 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UW50_OWEFU)

HSP 1 Score: 588 bits (1515), Expect = 1.550e-201
Identity = 308/598 (51.51%), Postives = 409/598 (68.39%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVE---RGEDSTHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGP-NTKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMR 1791
            FW+PG+  PG    E   R  +ST ++      + + +QR  LP+F+HR ++LY +ETY+T+VIVGETGCGK+TQIPQYL EAGW A  R +  TQPRRVAA+TVA RVAEE G  LG EVGY +RFD      NT++KF TDGML+R+MM DPLLS YSV+MLDEAHERT++ DI  GLLKK+++KRK+LR+I+ASATLDA+ FRDFF  +     + DTA IL++ GR  PVD+ Y+ +PVP+YV+A V+T + +H  EP GD+L FL G +E++    +L D A                      G     + V  +Y +LP S QMKVFE +   VR++VVAT IAE SITI+GI Y+VD GFV++  Y+P  G  +L+ T  S+ASA+QRAGRAGRV  GK  RL T+  +  KLP  +VPE+QR+D+  VVL LKALGID+I+ FDFLS P AE+M+R +E LYALGALD+ C LT+PLG  MAEFP++P  +K L  + EFGC E+ LT+AAM  ++N F+ P G    ++ +   A + F+V EGDH+T LNV+ +F +  +++ WC EN LN+R L RA  IR QL+R
Sbjct:    8 FWKPGSEKPGELLSEERNRSSESTAIIYNPNVSMSIESQRTRLPVFKHRTNILYLVETYQTVVIVGETGCGKSTQIPQYLLEAGWAAEGRVIAVTQPRRVAAVTVATRVAEERGCMLGNEVGYCIRFDDVTNEVNTRIKFLTDGMLVRDMMDDPLLSKYSVIMLDEAHERTLHTDIALGLLKKILKKRKDLRLIIASATLDAKRFRDFFNLNTTSDAKHDTAAILTVEGRMFPVDVFYSLDPVPDYVKATVETVMKIHHKEPEGDVLAFLTGMDEVEHVTRLLIDEARKL-------------------GKDSMKMMVARMYGSLPASEQMKVFERTPRNVRKIVVATNIAEASITINGIVYIVDCGFVKIKAYNPKSGIESLVVTEVSQASAEQRAGRAGRVRSGKAYRLYTDDSFE-KLPVSSVPEIQRSDMAGVVLQLKALGIDNIVRFDFLSPPPAESMVRGVELLYALGALDDHCHLTQPLGAQMAEFPLKPMFSKMLLNSDEFGCSEEMLTIAAMTQIENVFITPPG----QKQQAVRAKRNFSVEEGDHLTLLNVYTAFIKYKKNSRWCHENFLNYRGLCRAVNIREQLLR 581          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A7K7VGR2_EUDEL (RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 RepID=A0A7K7VGR2_EUDEL)

HSP 1 Score: 590 bits (1520), Expect = 6.420e-201
Identity = 316/600 (52.67%), Postives = 408/600 (68.00%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVERGEDSTH-----VVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPN-TKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMR 1791
            FWRPGT GPG+   E  +         V     A L +  QR+ LP+F+ R  +LY +E+Y+TLVIVGETGCGK+TQIPQYL EAGWTA  R V  TQPRRVAA++VA RVA+E G+ LG EVGY +RFD    P  T++KF TDGML+REMM DPLL+ YSV+MLDEAHERT+Y DI  GLLKK+ +KR +LR+IVASATLDAE+FRDFF  +       DT+ IL++ GR  PVDI Y Q PVP+Y+Q+ V+TA+ +H +E  GDIL+FL G EE++  V ML ++A          TG+R            K L+VLP+Y+ LP   QMKVFE     VR+V+VAT IAETSIT+ G+ +V+D GFV+L  Y+P      L+    S+ASA QRAGRAGR   GKC RL TE D+  KLP  TVPEMQR++L  V+L LKALGID++L F FLS P A++M++ALE LYALG LD  C LTEPLG  +AEFP+ P  AK L  +  FGC E+ LT+AAM+ +QN F+ P      ++ +     ++FAV EGDH+T LNV+ +F +  +S+ WC+E+ LN++ LVRA  +R QL +
Sbjct:   10 FWRPGTEGPGVSVSEERQTPAESSGVTVFYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPRATRIKFLTDGMLVREMMSDPLLTKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSTVETAMKIHQTENDGDILIFLTGQEEVETVVSMLIEQARALSR-----TGMR------------KHLRVLPMYAGLPTVEQMKVFERVSRSVRKVIVATNIAETSITVHGVAFVIDCGFVKLRAYNPKTAIECLVVVPVSQASANQRAGRAGRNRSGKCYRLYTEEDFE-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDTHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQNIFVIPPN----QKSQAARRHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKK 587          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A8K1C8P6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8P6_PYTOL)

HSP 1 Score: 593 bits (1528), Expect = 9.550e-201
Identity = 324/622 (52.09%), Postives = 417/622 (67.04%), Query Frame = 1
Query:   10 FWRPGTTGPGL-----GFVERG-----EDSTHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNR-------AVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPNT-KVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDT---ATI-----LSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGV-RRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMRY 1794
            FWRPG   P L     G  ER       ++  V+      LPL AQR+ LP+F HRR +LYA+E+Y T ++VG TG GKTTQ+PQYL EAGW    R        + CTQPRR+AA+T+A RVA+E+G+ LG+EVGYAVRFD +  P T ++KFCTDGMLLRE MLDPLLS YSV+MLDEAHER +  D+L GL+KK+ RKR ELRVI+ASATL  + F  FF + + K  E  T   A+I     +S+ GRQ+PVDI Y +EP  +Y++  ++T LA+   E  GDILVFLPG +EI+  V  L DRA                            L  LPLY+ LP  MQ  VF P+   + R+V+VATTIAETS+TI G+ +VVD  FV+L F++P  G  +LLTT  SKASAKQRAGRAGRV PGKC RL T+  +  +L   T+P+MQRT+L  V L L ++GI DI HF+F+S PS EA+IRALE LY+LGA+DE+C L EPLGT MAEFPV P LAK L ++++FGC ++ LT+A+MLSV + F++PRG  ++RR ++ EAM EFA  EGDH+ YL +++ F + GR  DWC+E+ L F+AL RA EIR  L RY
Sbjct:    3 FWRPGERLPSLHGDAGGAEERDGARVDAEAPAVLYNPNHRLPLRAQRQQLPVFAHRREILYAVESYATTILVGATGSGKTTQVPQYLMEAGWAQKRRNGDGTPRMIACTQPRRIAAITIAERVAKEVGTPLGKEVGYAVRFDEKWDPETTQLKFCTDGMLLRETMLDPLLSRYSVIMLDEAHERNLETDLLLGLIKKIQRKRPELRVIIASATLQVDTFTRFFRSKKRKLPEEKTEKAASIGDVIAVSVEGRQYPVDIEYLREPCGDYLEKTIETVLAIDKHEGNGDILVFLPGQDEIEYVVRTLHDRA-------------------------ASHLIALPLYATLPAQMQQNVFLPAPRNISRKVIVATTIAETSVTIEGVVFVVDSCFVKLAFFNPFTGVESLLTTQVSKASAKQRAGRAGRVRPGKCFRLCTQEHFETQLSKETIPQMQRTNLASVALHLLSMGIQDIAHFEFVSPPSPEALIRALEVLYSLGAVDEQCRLIEPLGTQMAEFPVAPMLAKVLLSSFQFGCTDEVLTIASMLSVGDVFMNPRGS-KDRRAKISEAMSEFAEAEGDHLMYLKIYDEFIDNGRRRDWCDEHMLQFQALTRATEIRKHLKRY 598          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: A0A7K4K190_9AVES (RNA helicase (Fragment) n=1 Tax=Crypturellus soui TaxID=458187 RepID=A0A7K4K190_9AVES)

HSP 1 Score: 590 bits (1520), Expect = 1.020e-200
Identity = 316/600 (52.67%), Postives = 407/600 (67.83%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVERGED-----STHVVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPN-TKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMR 1791
            FWRPGT GPG+   E  +        ++     A L +  QR+ LP+F+ R  +LY +E Y+TLVIVGETGCGK+TQIPQYL EAGWTA  R V  TQPRRVAA+TVA RVA+E G+ LG EVGY +RFD    P  T++KF TDGML+REMM DPLL+ YSV+MLDEAHERT+Y DI  GLLKK+ +KR +LR+IVASATLDAE+FRDFF  +       DT+ IL++ GR  PVDI Y Q PVP+Y+Q+AV+T + +H +E  GDILVFL G EE++  V ML + A          +G++            K L++LP+Y+ LP   QMKVFE     VR+V+VAT IAETSIT+ GI +V+D GFV+L  Y+P      L+    SKASA QRAGRAGR   GKC RL TE D+  KLP  TVPEMQR++L  V+L LKALGID++L F FLS P A++M++ALE LYALG LD  C LTEPLG  +AEFP+ P  AK L  +  FGC E+ LT+AAM+ +QN F+ P      ++ +     ++FAV EGDH+T LNV+ +F +  +S+ WC+E+ LN++ LVRA  +R QL +
Sbjct:   10 FWRPGTEGPGVSISEERQSPAESSGVNIFYNPYASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPRATRIKFLTDGMLVREMMADPLLTKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSAVETVMKIHQTENDGDILVFLTGQEEVETVVSMLIEHARALSR-----SGMK------------KHLRILPMYAGLPSVEQMKVFERVSRSVRKVIVATNIAETSITVHGIGFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFE-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDMNCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQNIFVIPPN----QKSQAARQHRKFAVEEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNYKGLVRASVVREQLKK 587          
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Match: E1C4U5_CHICK (RNA helicase n=6 Tax=Galliformes TaxID=8976 RepID=E1C4U5_CHICK)

HSP 1 Score: 589 bits (1518), Expect = 2.740e-200
Identity = 318/600 (53.00%), Postives = 407/600 (67.83%), Query Frame = 1
Query:   10 FWRPGTTGPGLGFVERGEDSTH-----VVDKKLAHLPLTAQRKALPIFRHRRSLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAALTVAARVAEEMGSRLGEEVGYAVRFDARAGPN-TKVKFCTDGMLLREMMLDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLDAEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAVDTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVRFSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIAETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAGRVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILHFDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAKFLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAVTEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMR 1791
            FW+PGT GPG+   E  +         VV    A L +  QR+ LP+F+ R  +LY +E+Y+TLVIVGETGCGK+TQIPQYL EAGWTA  R V  TQPRRVAA++VA RVA+E G+ LG EVGY +RFD    P  T++KF TDGML+REMM DPLL+ YSV+MLDEAHERT+Y DI  GLLKK+ +KR +LR+IVASATLDAE+FRDFF  +       DT+ IL++ GR  PVDI Y Q PVP+Y+++ V+TA+ +H  E  GDIL FL G EE++  V ML ++A          TG+R            K L+VLP+Y+ LP   QMKVFE     VR+V+VAT +AETSITI GI YV+D GFV+L  Y+P      L+    SKASA QRAGRAGR   GKC RL TE D+  KLP  TVPEMQR++L  V+L LKALGID++L F FLS P A++M++ALE LYALG LD  C LTEPLG  +AEFP+ P  AK L  +  FGC ++ LT+AAM+ +QN FL P      ++ +     ++FAV EGDH+T LNV+ +F +  +S+ WC+E+ LN++ LVRA  +R QL +
Sbjct:   10 FWKPGTEGPGVSVSEERQSPAESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSR-----TGMR------------KHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFE-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPN----QKSQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKK 587          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10284.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA6_ECTSI0.000e+076.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z495_9STRA1.170e-23960.73P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2W5S5_9STRA6.110e-21351.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TSM4_9STRA2.600e-20553.76Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=... [more]
L8GZI0_ACACA4.530e-20253.44PremRNA splicing factor, putative n=1 Tax=Acantham... [more]
A0A8J1UW50_OWEFU1.550e-20151.51Ofus.G201261 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A7K7VGR2_EUDEL6.420e-20152.67RNA helicase (Fragment) n=8 Tax=Aves TaxID=8782 Re... [more]
A0A8K1C8P6_PYTOL9.550e-20152.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7K4K190_9AVES1.020e-20052.67RNA helicase (Fragment) n=1 Tax=Crypturellus soui ... [more]
E1C4U5_CHICK2.740e-20053.00RNA helicase n=6 Tax=Galliformes TaxID=8976 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10284contigD-mesarthrocarpus_Contig10284:11..3167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FRA6
Preferred nameDHX35
PFAMsAAA_22,DEAD,HA2,Helicase_C,OB_NTP_bind
Model size1974
Max annot lvl2759|Eukaryota
KEGG koko:K13117
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030054,GO:0032991,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
Exons6
Evalue0.0
EggNOG OGsCOG1643@1|root,KOG0922@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-26_002440.1
EC3.6.4.13
Descriptionhelicase activity
Cds size1974
COG categoryL
BRITEko00000,ko00002,ko01000,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10284.1.2prot_D-mesarthrocarpus_Contig10284.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10284 11..3167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789169.4242263-CDS-D-mesarthrocarpus_Contig10284:10..4481680789169.4242263-CDS-D-mesarthrocarpus_Contig10284:10..448Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 11..448 -
1680789169.4371123-CDS-D-mesarthrocarpus_Contig10284:631..15321680789169.4371123-CDS-D-mesarthrocarpus_Contig10284:631..1532Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 632..1532 -
1680789169.4473403-CDS-D-mesarthrocarpus_Contig10284:1841..19121680789169.4473403-CDS-D-mesarthrocarpus_Contig10284:1841..1912Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 1842..1912 -
1680789169.4640179-CDS-D-mesarthrocarpus_Contig10284:2148..23231680789169.4640179-CDS-D-mesarthrocarpus_Contig10284:2148..2323Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 2149..2323 -
1680789169.480234-CDS-D-mesarthrocarpus_Contig10284:2514..26781680789169.480234-CDS-D-mesarthrocarpus_Contig10284:2514..2678Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 2515..2678 -
1680789169.4901996-CDS-D-mesarthrocarpus_Contig10284:2942..31671680789169.4901996-CDS-D-mesarthrocarpus_Contig10284:2942..3167Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10284 2943..3167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10284.1.2

>prot_D-mesarthrocarpus_Contig10284.1.2 ID=prot_D-mesarthrocarpus_Contig10284.1.2|Name=mRNA_D-mesarthrocarpus_Contig10284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=658bp
MATFWRPGTTGPGLGFVERGEDSTHVVDKKLAHLPLTAQRKALPIFRHRR
SLLYALETYRTLVIVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRV
AALTVAARVAEEMGSRLGEEVGYAVRFDARAGPNTKVKFCTDGMLLREMM
LDPLLSTYSVVMLDEAHERTVYNDILFGLLKKVMRKRKELRVIVASATLD
AEEFRDFFETSRPKANEPDTATILSILGRQHPVDILYTQEPVPNYVQAAV
DTALAVHTSEPVGDILVFLPGAEEIDAAVEMLRDRAHHPDTQEPFSTGVR
FSGGGKGEGLHMKGLQVLPLYSALPVSMQMKVFEPSRSGVRRVVVATTIA
ETSITISGIRYVVDPGFVRLPFYDPTKGYGTLLTTVTSKASAKQRAGRAG
RVAPGKCLRLMTETDYHAKLPARTVPEMQRTDLCWVVLLLKALGIDDILH
FDFLSAPSAEAMIRALEHLYALGALDEECCLTEPLGTTMAEFPVEPCLAK
FLTAAWEFGCVEDALTVAAMLSVQNPFLHPRGGGRERRGRLQEAMKEFAV
TEGDHITYLNVFNSFEEVGRSADWCEENCLNFRALVRAGEIRNQLMRYRA
STAWMGEVVLPWKRIFFVPAVQWVASLLGVYLMCVSKVVLVVSHTLSSNT
ANPFPQCA
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mRNA from alignment at D-mesarthrocarpus_Contig10284:11..3167-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10284.1.2 ID=mRNA_D-mesarthrocarpus_Contig10284.1.2|Name=mRNA_D-mesarthrocarpus_Contig10284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3157bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10284:11..3167- (Discosporangium mesarthrocarpum MT17_79)
ATGGCGACGTTTTGGAGGCCTGGAACCACGGGACCGGGTTTGGGTTTTGT GGAACGGGGTGAAGATTCCACGCATGTCGTGGACAAGAAGCTGGCCCACT TGCCCCTGACAGCGCAGCGAAAAGCTCTCCCAATATTTAGACACCGTCGT AGTTTGCTCTATGCTTTGGAGACTTATCGCACGTTGGTCATCGTAGGAGA GACAGGATGCGGAAAAACAACACAGGTGGTTGCTGGAAGGACAAGCTTCG ATTACCCTTTAAATTCAATACGAACGTGTCGTTACTGTCGGGGAATTGAA GATGTGTGCTCATTCTGTGTTCCGGCAAGTTGTGAAATTTACCCCTGGCA ACCACCTCCTATCTCATAAGCTCGTCTCTCTTTCGCTTTCAGCTTCCTCT CCTCGTGTTTAGCATTACCCTTGAAGCGTCGCATTGGATATGATGTATGC GGATCATCTTCGGTTGTATCCCCCCTCTCGCACACGCAGATTCCGCAATA TCTGCACGAGGCGGGTTGGACCGCAGGAAACCGAGCGGTTGTTTGCACAC AGCCTCGTCGTGTCGCGGCGCTTACCGTAGCAGCTCGAGTGGCGGAGGAG ATGGGTTCACGGCTAGGAGAGGAAGTTGGCTATGCTGTACGCTTTGATGC AAGGTAAAACAAATCATCCCTGCCGTGGCGTTGTTACAACGTGAAACCCT TGTTTGCACCTTCTGGGTTCCCCGAGTACAAGGGACAGATTGACACATTT GAATAGTGCCTGAAAAAGGTTTGTTTTTGTATCATTTCCAAGTACTCATA TACAGCACGAACTGTTTGGATACCATGGTGTATGACACCTGCAGGGCAGG CCCAAATACCAAAGTGAAGTTCTGCACTGACGGAATGCTGCTGAGGGAAA TGATGCTGGACCCATTACTCTCAACATACAGCGTAGTAATGCTGGACGAG GCCCATGAGCGAACTGTGTACAATGATATCCTCTTTGGATTGCTCAAGAA GGTCATGCGCAAGAGAAAGGTGAGTCAAAATGCTGCGCTGGTATTTTTCA ACCTTTATTTTGTCTCATCTTGAATATCTACTGTGTATCAATACCTATTA CAGAGTCAATTCCTATCAATGAAACATTATGGCCTTTGGTATTTTGACTT TTCTCAAATAATAGGGTGATTGATGTGATGGCATACGAGTGGTGGTTGTG ATGAATTGAGGCACACGACAAATGCTCTGCTCTCCAACTTGATGCTCTGT TCCAGGAGCTGCGTGTCATAGTGGCATCAGCAACCTTAGACGCTGAGGAG TTTCGGGACTTCTTTGAGACCAGCAGGTGAGTGACCCATCATGGTTGCGA CAAAGATGCATTTTTTCATGTCACTCATCATAACAGCGAGGTTGTTTGAA GTACATCCAATACAGCTGATTACTTCTGAGTACCTCCCCAGTTGTTGATT TGACACGGCACTCCAAAGCAGTGTTGGCTTGAGTTGGCTTCACTCATCCT TTTGCGGCTGAGGGAAGTTGCACCTCAGCTGCTCTGGTTGTGGTCCATTT TAAGTTGTAGTGTTCTCACACTGTGAGTCTTCAACCCCTCACTTTGGCGT CCACACCTCCACCCCCCCAACCCAAACCGTTCAAGGCCCAAGGCAAATGA GCCCGACACTGCCACAATTTTATCCATCCTTGGCCGGCAGCACCCAGTTG ACATCCTCTATACCCAGGAACCGGTTCCAAACTACGTCCAGGCTGCTGTG GATACAGCTCTTGCCGTGCACACCTCTGAACCTGTGGGGGACATACTTGT CTTCCTTCCTGGGGCAGAGGAGATAGATGCTGCGGTGGAAATGCTTCGGG ACAGGGCCCACCATCCTGATACCCAAGAGCCCTTTAGCACGGGGGTGAGG TTCAGTGGGGGAGGGAAAGGGGAAGGACTGCACATGAAGGGACTGCAGGT GCTACCACTGTACTCCGCCCTGCCGGTGAGCATGCAGATGAAAGTGTTTG AGCCAAGCAGGTCGGGGGTGCGACGGGTTGTTGTAGCGACAACCATCGCC GAGACATCCATCACCATCAGTGGCATACGCTATGTGGTGGACCCAGGGTT TGTGCGCTTGCCATTCTATGACCCTACCAAGGGGTACGGGACCCTACTGA CTACAGTGACATCCAAGGCCTCTGCTAAGCAGCGAGCTGGGCGGGCAGGG CGGGTTGCCCCTGGCAAGTGCCTGCGGCTTATGACAGAGACAGACTATCA TGCCAAGCTCCCTGCCAGGACAGTCCCTGAAATGCAGAGGACAGACCTGT GCTGGGTGGTGCTACTGCTGAAGGCGTTGGGTATTGATGATATCTTACAC TTTGACTTCCTCTCTGCACCTTCTGCGGAGGCCATGATTCGGGCTCTGGA GCACCTTTATGCCCTTGGGGCCCTGGATGAAGAGTGCTGCCTCACTGAGC CCCTAGGGACAACAATGGCCGAGTTCCCTGTGGAGCCCTGCCTGGCAAAA TTTCTCACTGCGGCATGGGAGTTTGGCTGTGTCGAGGTGGGAAATGACAA CCTTGTGCCGGCATAGTAGGACCAGGTTTCGCTGTCGTGTGCAGATCAAG GCCGTGCCACTGCTGCAGAGTTTGAGATTCTGTTGGGTTGTGATGCTCAT GCCCACCCCCCCCTGGTTGCCGGGGCTATGCGCTCACAACAATGCAAAAC TTCGTTGACCTGTTGCCAGGACGCGCTAACCGTGGCGGCTATGCTGTCCG TTCAGAACCCATTCTTGCACCCACGAGGGGGGGGGCGAGAGAGAAGGGGG CGATTACAGGAGGCTATGAAGGAGTTTGCGGTGACTGAGGGAGACCACAT CACATACCTCAATGTGTTCAACTCGTTTGAGGAAGTAGGGAGGTCTGCTG ACTGGTGTGAGGAGAACTGCTTGAACTTTCGAGCTCTTGTAAGGGCAGGG GAGATCCGGAATCAGCTCATGAGGTACCGTGCTAGTACGGCCTGGATGGG TGAAGTTGTTCTTCCTTGGAAACGGATTTTTTTTGTGCCTGCTGTGCAGT GGGTGGCATCTCTCCTGGGAGTCTACTTGATGTGTGTCAGCAAGGTGGTT CTGGTAGTTAGTCATACCCTCTCAAGTAATACTGCCAATCCTTTCCCTCA ATGTGCA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10284:11..3167-

>mRNA_D-mesarthrocarpus_Contig10284.1.2 ID=mRNA_D-mesarthrocarpus_Contig10284.1.2|Name=mRNA_D-mesarthrocarpus_Contig10284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1974bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10284:11..3167- (Discosporangium mesarthrocarpum MT17_79)
ATGGCGACGTTTTGGAGGCCTGGAACCACGGGACCGGGTTTGGGTTTTGT
GGAACGGGGTGAAGATTCCACGCATGTCGTGGACAAGAAGCTGGCCCACT
TGCCCCTGACAGCGCAGCGAAAAGCTCTCCCAATATTTAGACACCGTCGT
AGTTTGCTCTATGCTTTGGAGACTTATCGCACGTTGGTCATCGTAGGAGA
GACAGGATGCGGAAAAACAACACAGATTCCGCAATATCTGCACGAGGCGG
GTTGGACCGCAGGAAACCGAGCGGTTGTTTGCACACAGCCTCGTCGTGTC
GCGGCGCTTACCGTAGCAGCTCGAGTGGCGGAGGAGATGGGTTCACGGCT
AGGAGAGGAAGTTGGCTATGCTGTACGCTTTGATGCAAGGGCAGGCCCAA
ATACCAAAGTGAAGTTCTGCACTGACGGAATGCTGCTGAGGGAAATGATG
CTGGACCCATTACTCTCAACATACAGCGTAGTAATGCTGGACGAGGCCCA
TGAGCGAACTGTGTACAATGATATCCTCTTTGGATTGCTCAAGAAGGTCA
TGCGCAAGAGAAAGGAGCTGCGTGTCATAGTGGCATCAGCAACCTTAGAC
GCTGAGGAGTTTCGGGACTTCTTTGAGACCAGCAGGCCCAAGGCAAATGA
GCCCGACACTGCCACAATTTTATCCATCCTTGGCCGGCAGCACCCAGTTG
ACATCCTCTATACCCAGGAACCGGTTCCAAACTACGTCCAGGCTGCTGTG
GATACAGCTCTTGCCGTGCACACCTCTGAACCTGTGGGGGACATACTTGT
CTTCCTTCCTGGGGCAGAGGAGATAGATGCTGCGGTGGAAATGCTTCGGG
ACAGGGCCCACCATCCTGATACCCAAGAGCCCTTTAGCACGGGGGTGAGG
TTCAGTGGGGGAGGGAAAGGGGAAGGACTGCACATGAAGGGACTGCAGGT
GCTACCACTGTACTCCGCCCTGCCGGTGAGCATGCAGATGAAAGTGTTTG
AGCCAAGCAGGTCGGGGGTGCGACGGGTTGTTGTAGCGACAACCATCGCC
GAGACATCCATCACCATCAGTGGCATACGCTATGTGGTGGACCCAGGGTT
TGTGCGCTTGCCATTCTATGACCCTACCAAGGGGTACGGGACCCTACTGA
CTACAGTGACATCCAAGGCCTCTGCTAAGCAGCGAGCTGGGCGGGCAGGG
CGGGTTGCCCCTGGCAAGTGCCTGCGGCTTATGACAGAGACAGACTATCA
TGCCAAGCTCCCTGCCAGGACAGTCCCTGAAATGCAGAGGACAGACCTGT
GCTGGGTGGTGCTACTGCTGAAGGCGTTGGGTATTGATGATATCTTACAC
TTTGACTTCCTCTCTGCACCTTCTGCGGAGGCCATGATTCGGGCTCTGGA
GCACCTTTATGCCCTTGGGGCCCTGGATGAAGAGTGCTGCCTCACTGAGC
CCCTAGGGACAACAATGGCCGAGTTCCCTGTGGAGCCCTGCCTGGCAAAA
TTTCTCACTGCGGCATGGGAGTTTGGCTGTGTCGAGGACGCGCTAACCGT
GGCGGCTATGCTGTCCGTTCAGAACCCATTCTTGCACCCACGAGGGGGGG
GGCGAGAGAGAAGGGGGCGATTACAGGAGGCTATGAAGGAGTTTGCGGTG
ACTGAGGGAGACCACATCACATACCTCAATGTGTTCAACTCGTTTGAGGA
AGTAGGGAGGTCTGCTGACTGGTGTGAGGAGAACTGCTTGAACTTTCGAG
CTCTTGTAAGGGCAGGGGAGATCCGGAATCAGCTCATGAGGTACCGTGCT
AGTACGGCCTGGATGGGTGAAGTTGTTCTTCCTTGGAAACGGATTTTTTT
TGTGCCTGCTGTGCAGTGGGTGGCATCTCTCCTGGGAGTCTACTTGATGT
GTGTCAGCAAGGTGGTTCTGGTAGTTAGTCATACCCTCTCAAGTAATACT
GCCAATCCTTTCCCTCAATGTGCA
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