mRNA_D-mesarthrocarpus_Contig10277.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: D8LNH8_ECTSI (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH8_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.620e-88 Identity = 138/201 (68.66%), Postives = 159/201 (79.10%), Query Frame = 1 Query: 31 MLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQ-GHSNKEGANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKG-PGKKYCLIEDQASH 627 MLADKLVGNL YDTD+EV NLELLKLRFGE+SMH CE+MVRDLEESKRVNANV +RLA +Q G + KE A QHFWP LLG+DMRLHP M + F +AYSVIKNPRLLVWKKQLGVV+L L F VERSFSVSPLHATLIMHF K E W L LA EV LPP++++K++MLWVNQGV+ + PG Y L++DQ + Sbjct: 1 MLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIMVRDLEESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLHPRMQDRLAAFGKAYSVIKNPRLLVWKKQLGVVELNLDFNGVERSFSVSPLHATLIMHFEGKAET---WRLSDLAREVELPPSVVQKRMMLWVNQGVVSESNPGPVYRLVKDQTQN 198
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE) HSP 1 Score: 276 bits (707), Expect = 2.080e-88 Identity = 144/219 (65.75%), Postives = 169/219 (77.17%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQ-GHSNKEGA--------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKG-PGKKYCLIEDQASH 627 +ELFVTEYRLMLADKLVGNL YDTD+EV NLELLKLRFGE+SM CE+MVRD+EESKRVNANV +RLA +Q G + KE A +QHFWP LLG+DMRLHP M + F +AYSVIKNPRLLVWKKQLG+V+L L F VERSFSVSPLHATLIMHF K E W L LA EV LPP++++K++MLWVNQGV+ + PG Y L++DQ + Sbjct: 152 KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMRHCEIMVRDVEESKRVNANVQDRLAQRQTGEAQKEDARCLDAVMVSQHFWPHLLGEDMRLHPRMQDRLAAFGKAYSVIKNPRLLVWKKQLGMVELNLEFNGVERSFSVSPLHATLIMHFEGKAET---WRLSDLAREVELPPSVVQKRMMLWVNQGVVSESNPGPVYRLVKDQTQN 367
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A7S0GLJ3_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLJ3_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.760e-56 Identity = 98/212 (46.23%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGANQ----------------H-FWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFEN---VERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVL 576 QELFV EYR+MLAD+L+ NLD++TDREVH LELLKLRFGESSM QCE+M++DL++SKR+ +N++ +A + G + +Q H FWP LL DD+++HP M + +D+FS+ YS +K PR L+W QLG V++ L + ++F+ SP+HATLI HF DK + W+ L+ E LP L++KKL+ WV+ +L Sbjct: 126 QELFVNEYRVMLADRLLSNLDFNTDREVHTLELLKLRFGESSMRQCEIMIKDLDDSKRIISNINSTIANRDGAQQQNHTDQVKPDSSATVVDAAIVSHIFWPALLQDDLKVHPKMQEHLDQFSKEYSKLKKPRKLIWLNQLGTVEVELEMDESGATPKTFTCSPIHATLISHFEDK----SMWTAADLSNETNLPEKLVKKKLIYWVHNRIL 333
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: K3X5T3_GLOUD (Anaphase-promoting complex subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5T3_GLOUD) HSP 1 Score: 198 bits (504), Expect = 7.340e-56 Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGAN------------QHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKKYCL 606 +ELFV EYR+MLADKL+ NL+Y+TDR+V LELLKLRFGE S+ QCE+MVRD+E+SKR+N N+ + + + A+ QHFWPP GD+ LHP +S +DE+ ++Y V++NPR L W LG VQL++ + VER FSVSPL A++++HF D+ + W + LA ++ + +L+ K +W+N G+L P +K + Sbjct: 463 RELFVNEYRMMLADKLLQNLEYNTDRDVQTLELLKLRFGEESLQQCEIMVRDIEDSKRINLNIQSTRTKKTAVTTSDAASKPLVHVDATIVSQHFWPPFQGDEFVLHPKVSSDIDEYKKSYEVLRNPRSLAWNPSLGSVQLSIELQGVERDFSVSPLQASIVLHFEDQDQ----WEVEALAAKLEISDDLLLKHTSVWINHGLLTFSPDRKVLI 672
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A833WHR5_PHYIN (Anaphase-promoting complex subunit 2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHR5_PHYIN) HSP 1 Score: 196 bits (498), Expect = 5.210e-55 Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQ--------QGHSNKEG------------------ANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NL++DTDR+V LELLKLRFGE S+ QCE+MVRD+E+SKR+N NV L QG S +E +Q FWPPL GDD LHP +SK +D F +AY V++NPR L W LG VQL++ E ER F+VSPL AT+I++F +K WS+ LA ++ + +++ K + LWVN G++ G+K Sbjct: 449 RELFVNEYRMMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSKRLNGNVQSTLERSGATAIVAVQGSSGEEAKELFAQPGAPSTRIDATIVSQQFWPPLQGDDFVLHPKVSKDIDAFKDAYHVLRNPRSLEWNTSLGSVQLSIELEGEEREFNVSPLQATMILYFEEKDR----WSVEELATKLEISADVLLKHVSLWVNHGLVSFASGRK 669
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A225VZU6_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZU6_9STRA) HSP 1 Score: 193 bits (491), Expect = 3.620e-54 Identity = 96/199 (48.24%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERLAMQQGHSNKEGANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NL++DTD +V LELLKLRFGE S+HQCE+MVRD+E+SKR+N NV + + ++ + FWPPL G+D LH +SK +D F +AY V++NPR L W LG VQL++ E V R F+VSPL AT+I++F DK W++ LA ++ + ++ K + LWVN G++ G+K Sbjct: 444 RELFVNEYRMMLADKLLQNLEFDTDLDVQTLELLKLRFGEDSLHQCEIMVRDIEDSKRLNLNVQSTM---EHPADATIVSHQFWPPLQGEDFMLHQTISKDIDAFKDAYHVLRNPRSLDWNPSLGSVQLSIDLEGVVREFTVSPLQATIILYFEDKDR----WNVEELAAKLEISDEVLLKHVSLWVNHGLVSFASGRK 635
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A8J5MDA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MDA6_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.380e-53 Identity = 100/225 (44.44%), Postives = 136/225 (60.44%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHE-------------------RLAMQQGHSNKEGA-------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NL +DTDR+V LELLKLRFGE S+ QCE+MVRD+E+S+R+N NV Q GHS +Q FWPP G+D LHP MSK +D F +AY V++NPR L W LG VQL++ + ER F+VSPL AT++++F +K WS+ LA ++ + +L+ K + LWVN G++ G+K Sbjct: 360 RELFVNEYRMMLADKLLQNLQFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSRRLNVNVQSTAEKPEANATLAAEASSGRETESQLGHSGTPSTRVDATIVSQQFWPPFQGEDFTLHPKMSKDIDAFKDAYHVLRNPRSLEWNPSLGSVQLSIELQGEEREFNVSPLQATIVLYFEEKDR----WSVEELAAKLEISDDLLLKHVSLWVNHGLVSFASGRK 580
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A0P1AJ53_PLAHL (Anaphase-promoting complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ53_PLAHL) HSP 1 Score: 192 bits (487), Expect = 1.680e-53 Identity = 99/217 (45.62%), Postives = 140/217 (64.52%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANV---HERLAMQQ--------GHSNKEGA-------NQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NL++DTDR+V LELLKLRFGE S+ QCE+MVRD+++SKR+N N E A+ + HS + +Q FWPPL G+D +LH +SK +D F EAYSV++NPR L W LG VQL++ EN R F++SP+ AT+I+HF DK W + LA ++ + +L+ K + +W+N G++ G+K Sbjct: 445 RELFVNEYRIMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDVDDSKRLNRNALSAMENFAIMKEASTDNSLAHSTTPSSYVDATIVSQQFWPPLQGEDFKLHSKVSKDIDAFKEAYSVLRNPRSLDWNASLGSVQLSIELENEVREFTLSPIQATIILHFEDKNR----WKIEELAAQLEISDDLLLKHISVWINHGLISFASGRK 657
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A3R7GZZ8_9STRA (Anaphase-promoting complex subunit 2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GZZ8_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.340e-53 Identity = 104/226 (46.02%), Postives = 139/226 (61.50%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERL----------AMQQGHSNKE------GANQ-----------HFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NLDYDTDR+V LELLKLRFGE S+ QCE+MVRD+E+SKR+N N L AM + KE G +Q FWPPL GD +HP+MSK +D F +AY V++NPR L W LG VQL + E ER F+VSPL A++I++F +K WS+ L+ ++ + +L+ K +WVN G++ PG+K Sbjct: 401 RELFVNEYRMMLADKLLQNLDYDTDRDVQTLELLKLRFGEESLQQCEIMVRDIEDSKRLNLNARSVLEKPEAKAAAAAMARAGEEKEIDAGRCGVSQTALVDATIISQQFWPPLQGDVFTVHPSMSKGIDAFKDAYHVLRNPRSLEWNPSLGSVQLLIELEGEEREFTVSPLQASIILYFEEKDR----WSVDELSAKLEVDDDLLLKHTSVWVNHGLVAFAPGRK 622
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Match: A0A2P4YMB7_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YMB7_9STRA) HSP 1 Score: 191 bits (484), Expect = 5.110e-53 Identity = 101/228 (44.30%), Postives = 141/228 (61.84%), Query Frame = 1 Query: 1 QELFVTEYRLMLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNANVHERL--------AMQQGHSNKEG---------------------ANQHFWPPLLGDDMRLHPAMSKTMDEFSEAYSVIKNPRLLVWKKQLGVVQLTLSFENVERSFSVSPLHATLIMHFSDKPEVIAPWSLPTLAEEVGLPPNLIEKKLMLWVNQGVLGKGPGKK 597 +ELFV EYR+MLADKL+ NL++DTDR+V LELLKLRFGE S+ QCE+MVRD+E+SKR+N NV + A +G ++ +Q FWPPL G+D LHP +SK +DEF AY V++NPR L W LG VQL+++ E ER F+VSPL AT+I++F +K W++ LA ++ + +L+ K + LWVN G++ G+K Sbjct: 449 RELFVNEYRMMLADKLLQNLEFDTDRDVQTLELLKLRFGEDSLQQCEIMVRDIEDSKRLNLNVQSTMENSAAKAAAATEGRPERKTKAQPDGSVGPGTQATRVDATIVSQQFWPPLQGEDFTLHPQVSKDIDEFKNAYHVLRNPRSLDWNPSLGSVQLSINLEGEEREFTVSPLQATIILYFEEKDR----WNVEELAAKLEISDDLLLKHVSLWVNHGLVSFALGRK 672 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10277.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10277.1.1 >prot_D-mesarthrocarpus_Contig10277.1.1 ID=prot_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=199bp MLADKLVGNLDYDTDREVHNLELLKLRFGESSMHQCEVMVRDLEESKRVNback to top mRNA from alignment at D-mesarthrocarpus_Contig10277:537..4066- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10277.1.1 ID=mRNA_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3530bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10277:537..4066- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10277:537..4066- >mRNA_D-mesarthrocarpus_Contig10277.1.1 ID=mRNA_D-mesarthrocarpus_Contig10277.1.1|Name=mRNA_D-mesarthrocarpus_Contig10277.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=597bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10277:537..4066- (Discosporangium mesarthrocarpum MT17_79)back to top |