mRNA_D-mesarthrocarpus_Contig10276.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A7S0Z522_9CRYP (Histidine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z522_9CRYP) HSP 1 Score: 57.4 bits (137), Expect = 5.860e-8 Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FE FDRRG+LRA+CGGGRYDRLLESFG
Sbjct: 87 FEGFDRRGELRAICGGGRYDRLLESFG 113
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A2I0BC99_9ASPA (Histidine--tRNA ligase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BC99_9ASPA) HSP 1 Score: 58.2 bits (139), Expect = 6.620e-8 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFGY 84
FEAFDR GKLRA+CGGGRYDRLL +FGY
Sbjct: 354 FEAFDREGKLRAICGGGRYDRLLSTFGY 381
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A835FDD3_9POAL (tRNA-synt_His domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835FDD3_9POAL) HSP 1 Score: 57.0 bits (136), Expect = 1.490e-7 Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG--------YHVGD---LQHWSTVNSCIVLRENDGVFLTSRGSWQHGLV 192
FEAFDR G LRA+CGGGRYDRLL +FG + GD ++H +N+ + L W+ G+V
Sbjct: 226 FEAFDREGNLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVEHAERINA-------SRLILVGNSEWERGMV 293
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A426ZLG8_ENSVE (Histidine--tRNA ligase n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZLG8_ENSVE) HSP 1 Score: 55.5 bits (132), Expect = 4.080e-7 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 104 FEAFDREGKLRAICGGGRYDRLLSTFG 130
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A833VPF2_9POAL (Histidine--tRNA ligase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VPF2_9POAL) HSP 1 Score: 55.8 bits (133), Expect = 4.300e-7 Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR+GKLRA+CGGGRYDRLL +FG
Sbjct: 344 FEAFDRQGKLRAICGGGRYDRLLSTFG 370
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A811NEH0_9POAL (Histidine--tRNA ligase n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811NEH0_9POAL) HSP 1 Score: 55.5 bits (132), Expect = 5.240e-7 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 165 FEAFDREGKLRAICGGGRYDRLLSTFG 191
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A8J5GYD7_ZINOF (tRNA-synt_His domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GYD7_ZINOF) HSP 1 Score: 55.5 bits (132), Expect = 5.680e-7 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 179 FEAFDREGKLRAICGGGRYDRLLSTFG 205
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A4D9CRF8_9STRA (Histidine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRF8_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 5.800e-7 Identity = 22/27 (81.48%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR+G+LRA+CGGGRYD+LLE+FG
Sbjct: 260 FEAFDRKGELRAICGGGRYDKLLETFG 286
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A5P1ECY7_ASPOF (Histidine--tRNA ligase n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ECY7_ASPOF) HSP 1 Score: 55.5 bits (132), Expect = 5.820e-7 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 295 FEAFDREGKLRAICGGGRYDRLLSTFG 321
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Match: A0A1D6MIQ0_MAIZE (Histidine--tRNA ligase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MIQ0_MAIZE) HSP 1 Score: 55.5 bits (132), Expect = 5.870e-7 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 1 FEAFDRRGKLRAVCGGGRYDRLLESFG 81
FEAFDR GKLRA+CGGGRYDRLL +FG
Sbjct: 340 FEAFDREGKLRAICGGGRYDRLLSTFG 366 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10276.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10276.1.1 >prot_D-mesarthrocarpus_Contig10276.1.1 ID=prot_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=88bp FEAFDRRGKLRAVCGGGRYDRLLESFGYHVGDLQHWSTVNSCIVLRENDGback to top mRNA from alignment at D-mesarthrocarpus_Contig10276:596..1616- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10276.1.1 ID=mRNA_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1021bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10276:596..1616- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10276:596..1616- >mRNA_D-mesarthrocarpus_Contig10276.1.1 ID=mRNA_D-mesarthrocarpus_Contig10276.1.1|Name=mRNA_D-mesarthrocarpus_Contig10276.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=264bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10276:596..1616- (Discosporangium mesarthrocarpum MT17_79)back to top |