mRNA_D-mesarthrocarpus_Contig10273.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: D7FQL3_ECTSI (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL3_ECTSI) HSP 1 Score: 150 bits (380), Expect = 4.750e-42 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 QTVGKYMIEIWKA GMDMNNVEFLWAS+EIN+RP+EYW RVMEVARLNNL+R+QRCGQIMGR++ EMSSAQIFYPCMQ C D Sbjct: 171 QTVGKYMIEIWKATGMDMNNVEFLWASEEINRRPAEYWGRVMEVARLNNLSRVQRCGQIMGRAEAGEMSSAQIFYPCMQ---CAD 252
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A835YH37_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH37_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.140e-37 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 Q VGKYMIEIWKA GMDM NV+FLWAS+EIN+ P+EYW RVME+ARL+ +ARIQRC IMGRS+TEEMSSAQ+FYPCMQ C D Sbjct: 166 QVVGKYMIEIWKAVGMDMRNVQFLWASEEINRSPAEYWGRVMEIARLSTVARIQRCCTIMGRSETEEMSSAQVFYPCMQ---CAD 247
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: W7UAG6_9STRA (Tyrosine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAG6_9STRA) HSP 1 Score: 137 bits (344), Expect = 7.990e-37 Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 QTVG+YMIEIW+A GMDM NVEFLWAS+EIN EYWSRVM++AR+NNLARIQRC IMGR DTEEMS+AQI YPCMQ C D Sbjct: 164 QTVGRYMIEIWRAVGMDMQNVEFLWASEEINAHSDEYWSRVMDIARINNLARIQRCCTIMGRKDTEEMSAAQIMYPCMQ---CAD 245
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A7S1UIM9_9STRA (Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIM9_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.400e-36 Identity = 60/79 (75.95%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQ 237 +TVG+YMIEIW+A GMDM NV FLWAS EIN RP EYWSRVME+ARLNNLARIQRC IMGR ++++MS+AQI YPCMQ Sbjct: 117 RTVGRYMIEIWRAVGMDMTNVRFLWASDEINARPDEYWSRVMEIARLNNLARIQRCCTIMGRKESDDMSAAQIMYPCMQ 195
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: M2WZ79_GALSU (Tyrosine--tRNA ligase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZ79_GALSU) HSP 1 Score: 132 bits (331), Expect = 3.770e-35 Identity = 58/85 (68.24%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 QTVG+Y I++WKA GMDM VEFLWAS+EIN++P+EYW RVM++AR+N L RI RC QIMGR+DT+E+S+AQIFYPCMQ C D Sbjct: 128 QTVGEYFIQVWKACGMDMTRVEFLWASEEINRKPNEYWMRVMDIARVNKLPRIVRCSQIMGRNDTDELSAAQIFYPCMQ---CAD 209
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A812VWR2_SYMMI (Tyrosine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VWR2_SYMMI) HSP 1 Score: 131 bits (329), Expect = 4.580e-35 Identity = 62/85 (72.94%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 Q VG+YMIEIWKA GMDM NV FLWAS+EIN EYWSRVME+AR+NNL RIQRC IMGR D EEMS++QIFYPCMQ C D Sbjct: 80 QMVGQYMIEIWKAIGMDMTNVRFLWASEEINSHADEYWSRVMEIARMNNLPRIQRCCTIMGRKDGEEMSASQIFYPCMQ---CAD 161
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A8J2Z8_CHLRE (Tyrosine--tRNA ligase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8J2Z8_CHLRE) HSP 1 Score: 130 bits (328), Expect = 4.650e-35 Identity = 58/80 (72.50%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQV 240 QTVGKYM+E+WKA GMD++ VEFL +S+EINKRP EYW+ VM++AR NNL RI RC QIMGR++TEE+S+AQIFYPCMQV Sbjct: 90 QTVGKYMVEVWKAVGMDLSKVEFLSSSEEINKRPDEYWTLVMDIARKNNLKRIVRCSQIMGRTETEELSAAQIFYPCMQV 169
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A7S3HMT5_9STRA (Tyrosine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMT5_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.500e-34 Identity = 62/83 (74.70%), Postives = 67/83 (80.72%), Query Frame = 1 Query: 7 VGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 +G+YMIEIWKA GMDM NV FLWAS EIN EYWS VM+VAR+NNLARIQRC IMGR DTEEMS+AQIFYPCMQ C D Sbjct: 170 IGQYMIEIWKAIGMDMQNVRFLWASDEINAHAEEYWSLVMDVARVNNLARIQRCCTIMGRKDTEEMSAAQIFYPCMQ---CAD 249
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A8J4BCX6_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BCX6_9CHLO) HSP 1 Score: 130 bits (328), Expect = 4.290e-34 Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 QTVGKYM+E+WKA GMD++ VEFL +S+EINKRP EYW+ VM++AR NNL RI RC QIMGRS+TEE+S+AQIFYPCMQ C D Sbjct: 231 QTVGKYMVEVWKAVGMDLSKVEFLSSSEEINKRPDEYWTLVMDIARKNNLKRIVRCSQIMGRSETEELSAAQIFYPCMQ---CAD 312
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Match: A0A250XKU7_9CHLO (Tyrosine--tRNA ligase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKU7_9CHLO) HSP 1 Score: 128 bits (321), Expect = 9.200e-34 Identity = 58/85 (68.24%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 QTVGKYMIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCGQIMGRSDTEEMSSAQIFYPCMQVVVCVD 255 QTVGKYMIE+WKA GMD++ VEFL +S+EINKRP EYW+ VM++AR N+L R+ RC QIMGRS+T+E+S+AQIFYPCMQ C D Sbjct: 119 QTVGKYMIEVWKAVGMDLSKVEFLSSSEEINKRPDEYWTLVMDIARKNSLGRVVRCSQIMGRSETDELSAAQIFYPCMQ---CAD 200 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10273.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10273.1.1 >prot_D-mesarthrocarpus_Contig10273.1.1 ID=prot_D-mesarthrocarpus_Contig10273.1.1|Name=mRNA_D-mesarthrocarpus_Contig10273.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=81bp MIEIWKAAGMDMNNVEFLWASQEINKRPSEYWSRVMEVARLNNLARIQRCback to top mRNA from alignment at D-mesarthrocarpus_Contig10273:588..1512- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10273.1.1 ID=mRNA_D-mesarthrocarpus_Contig10273.1.1|Name=mRNA_D-mesarthrocarpus_Contig10273.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=925bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10273:588..1512- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10273:588..1512- >mRNA_D-mesarthrocarpus_Contig10273.1.1 ID=mRNA_D-mesarthrocarpus_Contig10273.1.1|Name=mRNA_D-mesarthrocarpus_Contig10273.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=243bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10273:588..1512- (Discosporangium mesarthrocarpum MT17_79)back to top |