mRNA_D-mesarthrocarpus_Contig10272.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10272.3.1 vs. uniprot
Match: D7FS51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS51_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 3.590e-14 Identity = 48/84 (57.14%), Postives = 60/84 (71.43%), Query Frame = 3 Query: 3 FVLYKEKNMLLTERLRAQRKNMPLIAGDRRQKVKRSMKAIRVVVGERQRVKQAALEARQREKRLQQRAEAAAMQAELGAGGTGE 254
FVLYKEKNML+++ + ++R +P+ AGDRRQKVKRSMKAI+VVVGERQRVK+AAL RQ + +QR G GG E
Sbjct: 128 FVLYKEKNMLMSQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAALRERQLAAKREQRXXXXXXXXXXGEGGASE 211
BLAST of mRNA_D-mesarthrocarpus_Contig10272.3.1 vs. uniprot
Match: A0A7S2UD47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD47_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 1.920e-5 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 3 FVLYKEKNMLLTERLRAQRKNMPLIAGDRRQKVKRSMKAIRVVVGERQRVK 155
FVLY+E+NMLLTE + +RK M L DRR KVK+SM AI+ V+GER+R K
Sbjct: 98 FVLYQERNMLLTEAAKCRRKGMYLPQPDRRHKVKKSMGAIKHVLGERKRDK 148
BLAST of mRNA_D-mesarthrocarpus_Contig10272.3.1 vs. uniprot
Match: A0A7S4IRP3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IRP3_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 3.770e-5 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 6 VLYKEKNMLLTERLRAQRKNMPLIAGDRRQKVKRSMKAIRVVVGERQRVKQAALEARQREKRLQ 197
VLYKE+NMLLTE+ +R+N+ +R +KVK+SM+AIR V+GER+R K AA + ++RE Q
Sbjct: 93 VLYKERNMLLTEKQILRRRNLEFPQPERWRKVKKSMQAIRHVMGERKREKIAAAKQKRRESEAQ 156 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10272.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10272.3.1 >prot_D-mesarthrocarpus_Contig10272.3.1 ID=prot_D-mesarthrocarpus_Contig10272.3.1|Name=mRNA_D-mesarthrocarpus_Contig10272.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=124bp MLLTERLRAQRKNMPLIAGDRRQKVKRSMKAIRVVVGERQRVKQAALEARback to top mRNA from alignment at D-mesarthrocarpus_Contig10272:3683..4334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10272.3.1 ID=mRNA_D-mesarthrocarpus_Contig10272.3.1|Name=mRNA_D-mesarthrocarpus_Contig10272.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=652bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10272:3683..4334- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10272:3683..4334- >mRNA_D-mesarthrocarpus_Contig10272.3.1 ID=mRNA_D-mesarthrocarpus_Contig10272.3.1|Name=mRNA_D-mesarthrocarpus_Contig10272.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=372bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10272:3683..4334- (Discosporangium mesarthrocarpum MT17_79)back to top |