mRNA_D-mesarthrocarpus_Contig10270.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: D8LIZ6_ECTSI (Chp-1 / RAR1 homologue n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIZ6_ECTSI) HSP 1 Score: 204 bits (519), Expect = 5.540e-62 Identity = 101/192 (52.60%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 1 MKVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLK--------ASGKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCEKRVYDWDEFERLEG 552 MKVYVH+EEG D +LHVTLKLTLPKKW ++P +L+LF++SYNKRKPDNQL + HL+ A + L D IG + + DV V G +E A A RAG+LRCRNFGCNQ+YDE NSD+ACR HT PPIFHDTRKGW CC+KRVYDWDEFE+L+G Sbjct: 1 MKVYVHFEEGSDAELHVTLKLTLPKKWNDESPVRLLKLFIDSYNKRKPDNQLDVDECHLETGASLDQGAEEQALAKGDTIGATITDRADVFVRPGATKEGMGAAAXXXXXXXXXXXXXXXXXXXXXXATAPKRAGALRCRNFGCNQYYDEADNSDTACRFHTGPPIFHDTRKGWSCCKKRVYDWDEFEQLQG 192
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A6V2Q7H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Q7H8_HETAK) HSP 1 Score: 181 bits (458), Expect = 5.300e-53 Identity = 92/185 (49.73%), Postives = 113/185 (61.08%), Query Frame = 1 Query: 1 MKVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKAS-GKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCEKRVYDWDEFERLEG 552 MKVYVHYEEG D LH TLKLTLPKKW K VL+LF+ESYN + P N L +HL+ S G+ ++ D++ D+M + D+HV G Q+AP A++ + T G LRCRN+GCNQ Y E N AC HHTAPPIFHD RKGW CC KRVYDWDEF+++ G Sbjct: 1 MKVYVHYEEGSDESLHKTLKLTLPKKWADKETNKVLDLFLESYNAKNPGNLLEMGSVHLENSRGQKMSGQDLVKDLMNDREDIHVRPGAPPAH--QEAPAAKEQKSEAQT---------------NEGKLRCRNYGCNQWYLEAENGPEACGHHTAPPIFHDARKGWSCCAKRVYDWDEFQQIAG 168
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A836CMP5_9STRA (Chp-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP5_9STRA) HSP 1 Score: 181 bits (459), Expect = 8.820e-53 Identity = 93/185 (50.27%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAK-NPFMVLELFVESYNKRKPDNQLVAADLHLKAS-GKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCEKRVYDWDEFERLEG 552 KVY+HYEEG D +LH TLKLTLP+KW A+ +P VLELF+ESYNK+KP L A HL+ S G L+ D+IGDVM+ + D+ V G + K A A G A G LRCRN+GC Y E N AC HHTAPP+FHDT+KGW CC KRVYDWDEF+ + G Sbjct: 4 KVYLHYEEGSDAELHTTLKLTLPRKWVAEGSPMQVLELFIESYNKKKPQTPLSAEACHLENSDGLALSAGDVIGDVMRDREDIRVRPGATKPGKSDVATAAAGGXXXXXXX----------AAADTDGLLRCRNYGCGARYAEADNHARACAHHTAPPVFHDTKKGWSCCAKRVYDWDEFQAIAG 178
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: W7U2Z9_9STRA (Chord family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z9_9STRA) HSP 1 Score: 162 bits (411), Expect = 7.280e-46 Identity = 85/186 (45.70%), Postives = 113/186 (60.75%), Query Frame = 1 Query: 1 MKVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAAD-LHL-KASGKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCEKRVYDWDEFERLEG 552 MK+YVHYEE + +TLKLTLPK W + VLELF+ESYNK+K + D +H+ KA G +L +I+ D++ + D+++ GP P K + H L + A+ E G LRC+N+GCNQ + EE NS+ ACR H APP+FHDT+KGW CC KRVYDWDEF +EG Sbjct: 1 MKLYVHYEEAGQDEKALTLKLTLPKSWAEQPLLQVLELFIESYNKKKTGLPPLDKDFVHMEKAGGVILPVGNIVSDMLSDRDDLYIRSGP--------GPARGK---IAH---LSSPPNAHASSESSTGLLRCKNYGCNQSFSEENNSEEACRFHKAPPVFHDTKKGWSCCAKRVYDWDEFHTIEG 172
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: K3X7U4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7U4_GLOUD) HSP 1 Score: 139 bits (350), Expect = 7.390e-37 Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKASGKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCE-KRVYDWDEFERL 546 KVY+H+EEG D LH+TLK+TLP KW + + E FVE YN +KP+++L A HL+ L ++++ ++ D+ + G +KP +A K L L+C+NFGC + + EE N D AC HH PP FHD +KGW CC K VYDWD+FE++ Sbjct: 18 KVYMHFEEGADAALHLTLKMTLPSKWASHTVDYLKEFFVEHYNTKKPESKLDGALFHLERKSTALHGDELLHYAVQKHDDLFLKSGAS-TKKPVKAEGVAKKAAAAQNL------------------LQCKNFGCAKKFAEEDNHDEACHHHAQPPTFHDMKKGWSCCSSKMVYDWDDFEKI 180
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A024U7E8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7E8_9STRA) HSP 1 Score: 139 bits (349), Expect = 8.520e-37 Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKAS-GKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCC-EKRVYDWDEFERLE 549 K+Y+H+EEG D H+TLKLT+P KW + E F+++YN+RKPDN++ HL+ S + L ++ I D +K++ D++V GP + + E+ R L ++C+NFGC + ++ N SAC+HHT PP FHDT+KGW CC EK VYDW++FE +E Sbjct: 18 KIYLHFEEG-DEANHLTLKLTIPSKWSGATVDRLKEFFLDTYNERKPDNKVDPNAYHLERSENRALRGDETIHDTIKNRDDIYVKLGPSTYKHKKDLADEERERLAPKDL------------------VQCKNFGCREKFNPVENHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIE 182
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A397CLV8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CLV8_9STRA) HSP 1 Score: 138 bits (347), Expect = 7.490e-35 Identity = 69/184 (37.50%), Postives = 105/184 (57.07%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHL-KASGKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCC-EKRVYDWDEFERLE 549 K+Y+H+EEG D H+TLKLT+P KW + E F+E+YN+R+P+N++ HL + +V+ ++ I D +K++ D++V GP + + E+ R L ++C+NFGC ++ N SAC+HHT PP FHDT+KGW CC EK VYDW++FE +E Sbjct: 268 KIYLHFEEG-DEANHLTLKLTIPSKWSGATVDRLKEFFLETYNERRPENKVDPNAYHLERTENRVIRGDETIHDTIKNRDDIYVKIGPSTFKHKKDLADEERERAAPKDL------------------VQCKNFGCRDKFNPADNHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIE 432
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A8J2SGV2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGV2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.620e-34 Identity = 71/186 (38.17%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 1 MKVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKASGK-VLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCC-EKRVYDWDEFERLEG 552 MKV++HYEE L TLK+TLPKKWE +++ F++SYN + P+NQ+VA+ L+ + VL + + + + + D++V G AP A K + V + + RA C+ FGCN+ Y E NSD ACRHHT PP+FH+T K W CC +K+ YDW+ F +++G Sbjct: 1 MKVFIHYEEPAAESLRQTLKITLPKKWEMGPCSNLMDTFIKSYNAKHPENQMVASQYRLETEMRQVLQPHTTVCEKVHDRADLYVKFGS--------APAAPK------PMQTVNNDMLDPLDRCRA----CKLFGCNKKYTERANSDDACRHHTKPPVFHETAKYWSCCPQKKAYDWESFMQIKG 168
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A067CJW9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJW9_SAPPC) HSP 1 Score: 132 bits (333), Expect = 1.680e-34 Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKAS-GKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSLRCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCCE-KRVYDWDEFERLE 549 K+Y+H+EEG D H+TLKLT+P KW V+ +++P+N++ A++ HL+ S G+VL ++ I D +K + DV+V GP + + A E+ + V L ++C+NFGC + + + N ACRHH APP FHDT+KGW CC K VYDWD+FE++E Sbjct: 18 KIYLHFEEG-DEAHHLTLKLTIPSKWAGAT--------VDRLKEKRPNNKVDASEYHLERSEGRVLRGDETIHDTIKSRDDVYVKLGPSTFKHKKDAADEEREKEVPKEL------------------VQCKNFGCREKFVDSENHGLACRHHKAPPTFHDTKKGWSCCSSKMVYDWDDFEKIE 174
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Match: A0A3R6YTE8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YTE8_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.430e-33 Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 4 KVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNQLVAADLHLKAS-GKVLTHNDIIGDVMKHQGDVHVLHGPMEERKPQQAPKAEKGRGVEHTLWLVTLEWMFAAQEPRAGSL-RCRNFGCNQHYDEETNSDSACRHHTAPPIFHDTRKGWGCC-EKRVYDWDEFERLE 549 K+Y+H+EEG D H+TLKLT+P KW + E F+++YN+RKPDN++ HL+ S + L ++ I D +K++ D++V GP + K + G FA + L +C+NFGC + ++ N SAC+HHT PP FHDT+KGW CC EK VYDW++FE +E Sbjct: 701 KIYLHFEEG-DEANHLTLKLTIPSKWSGATVDRLKEFFLDTYNERKPDNKVDPNAYHLERSENRALRGDETIHDTIKNRDDIYVKLGPSTYKH-----KKDLADGT------------FARERLAPKDLVQCKNFGCREKFNPAENHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIE 867 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10270.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10270.2.1 >prot_D-mesarthrocarpus_Contig10270.2.1 ID=prot_D-mesarthrocarpus_Contig10270.2.1|Name=mRNA_D-mesarthrocarpus_Contig10270.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=186bp MKVYVHYEEGLDTDLHVTLKLTLPKKWEAKNPFMVLELFVESYNKRKPDNback to top mRNA from alignment at D-mesarthrocarpus_Contig10270:1859..4216+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10270.2.1 ID=mRNA_D-mesarthrocarpus_Contig10270.2.1|Name=mRNA_D-mesarthrocarpus_Contig10270.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2358bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10270:1859..4216+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10270:1859..4216+ >mRNA_D-mesarthrocarpus_Contig10270.2.1 ID=mRNA_D-mesarthrocarpus_Contig10270.2.1|Name=mRNA_D-mesarthrocarpus_Contig10270.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=558bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10270:1859..4216+ (Discosporangium mesarthrocarpum MT17_79)back to top |