mRNA_D-mesarthrocarpus_Contig10270.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A6H5L426_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L426_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.840e-34 Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 28 RVLVTGAGGRTGGKVVESLLG-QGVAMRGLVRSEKSKSKLEK---LGLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLF-RYINPGRPNFYWCVNGEPETV 372 RVLVTGAGGRTGG V E LL +G A +G+VR+EKS + L+K + + +I IAD+ P LA A+EG++AV+LCTSAVPKIYPFSI K++ KK+ R +PGRP FYWC NG PE V Sbjct: 68 RVLVTGAGGRTGGIVFEKLLAKEGYATKGMVRTEKSANNLKKKCKVEVLDSNIAIADLATPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMILRSEDPGRPKFYWCENGTPEEV 187
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: D8LIZ7_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ7_ECTSI) HSP 1 Score: 130 bits (326), Expect = 4.370e-34 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 28 RVLVTGAGGRTGGKVVESLLG-QGVAMRGLVRSEKSKSKLEK---LGLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLF-RYINPGRPNFYWCVNGEPETV 372 RVLVTGAGGRTGG V E LL +G A +G+VR+EKS + L+K + +I IAD+T P LA A+EG++AV+LCTSAVPKIYPFSI K++ KK+ R +PGRP FYWC NG PE V Sbjct: 69 RVLVTGAGGRTGGIVFEKLLDKEGYATKGMVRTEKSANNLKKKCKTEVLDSNIAIADLTTPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMILRSEDPGRPKFYWCENGTPEEV 188
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A4D9D9A5_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A5_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.840e-26 Identity = 69/127 (54.33%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 PAMSI-EGVSRVLVTGAGGRTGGKVVESLLGQ-GVAMRGLVRSEKSKSKLEKL-GLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLFRYINPGRPNFYWCVNGEPETV 372 P MS+ + +VLVTGAGGRTG V + L + GLVRS+KS SKL K G E I+I DV DP TL+ A+EG D++ILCTSA PKI FSI+K+L KKL R PGRP F + GEPE V Sbjct: 42 PTMSLGDSPRKVLVTGAGGRTGTLVFQKLQAKTDFQPIGLVRSKKSASKLRKAAGATDEQIVIGDVMDPATLSKALEGCDSLILCTSATPKILLFSIIKILFKKLLRRA-PGRPEFKFPPRGEPEEV 167
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A7S2T4W8_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T4W8_9CHLO) HSP 1 Score: 104 bits (260), Expect = 4.920e-26 Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 25 SRVLVTGAGGRTGGKVVESLLGQGVAMRGLVRSEKSKSKLEK-LGL-ASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLFRYINPGRPNFYWCVNGEP 363 SRVLVTGAGGRTG V++ L QG++ RGL R+EKSK K+ K LG A D+++ DV+ + AMEG V+L +SA P+I S+V++LVKKLFR ++PGRP+F W NG P Sbjct: 45 SRVLVTGAGGRTGQLVLKKLAEQGISTRGLFRTEKSKKKIAKMLGADARVDLVVGDVSSAEDVKAAMEGCTHVVLLSSAKPQIKKRSLVRILVKKLFR-MDPGRPSFRWIENGSP 158
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A5B8MKK8_9CHLO (NAD(P)-binding protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKK8_9CHLO) HSP 1 Score: 109 bits (272), Expect = 6.800e-26 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 25 SRVLVTGAGGRTGGKVVESLLGQGVAMRGLVRSEKSKSKLEK-LGL-ASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLFRYINPGRPNFYWCVNGEPETV 372 SRVLVTGAGGRTG V++ L QG++ RGL R+EKSK K+ K LG A D+++ DV+ + AMEG V+L +SA P+I S+V++LVKKLFR ++PGRP+F W NG PE V Sbjct: 117 SRVLVTGAGGRTGQLVLKKLAEQGISTRGLFRTEKSKKKIAKMLGADARVDLVVGDVSSAEDVKAAMEGCTHVVLLSSAKPQIKKRSLVRILVKKLFR-MDPGRPSFRWIENGSPEVV 233
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A7S3XVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK4_HETAK) HSP 1 Score: 102 bits (253), Expect = 7.680e-24 Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 25 SRVLVTGAGGRTGGKVVESLLG-QGVAMRGLVRSEKSKSKLEKL--GLASED--ILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLF-RYIN--PGRPNFYWCVNGEPETV 372 ++VLVTGAGG+TGG V ++LL +G G+VR KS +KL+K+ G S + I+ D++DP +L TAM+G DA+++ TSAVPKI P SI K+L K F + +N PGRP F W NG+PE V Sbjct: 3 TKVLVTGAGGKTGGLVFKNLLEKEGFEAVGMVRGGKSANKLKKVVGGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNGQPELV 126
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A7S0JAA2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JAA2_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 4.070e-22 Identity = 59/118 (50.00%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 28 RVLVTGAGGRTGGKVVESLLGQ--GVAMRGLVRSEKSKSKLEKLGLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKK-LFRYINPGRPNFYWCVNGEPETV 372 RVLVTGAGGRTG V + L V GLVRS+K+ L KLG + D D ++ +AM G DAV+LCTSAVPKI P+SIV LL +K + R PGRP F + NG P+ V Sbjct: 38 RVLVTGAGGRTGSLVFDKLNKDYDSVEPLGLVRSKKATKALCKLGATEAQAVRGDTMDLSSIRSAMAGCDAVVLCTSAVPKILPWSIVTLLFRKTILRAKEPGRPKFKFGANGTPQEV 155
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A7S4A772_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A772_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.150e-21 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 22 VSRVLVTGAGGRTGGKVVESLLGQG-VAMRGLVRSEKSKSKLEKLGLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLFRYINPGRPNFYWCVNGEPETV 372 + +VLVTGAGGRTG V E L GL RS K++ L+ +G + +++ +AD+ D +LA AM G DAV+LCTSAVP I P S++K + K+ ++ RP F + NG PE V Sbjct: 16 LKKVLVTGAGGRTGKLVFEQLKADSNYKPVGLARSGKAQKALKAVGASDDEVCVADIADEKSLAAAMAGCDAVVLCTSAVPAIKPLSLMKTMATKVLPFVKTSRPAFKFPKNGTPEEV 133
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A7S3JVE2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.630e-21 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 28 RVLVTGAGGRTGGKVVESLLG--QGVAMRGLVRSEKSKS----KLEKLGLASEDILIADVT-DPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKKLFRYINPGRPNFYWCVNGEPETV 372 +V+VTGAGGRTG V E L + V GLVRS KSK+ K++ L I+ ADVT +L AM G DA+ILCTSAVPKI P+SIVK++ KKL R + GRP F + NG PE V Sbjct: 18 KVMVTGAGGRTGKLVFEQLSNDYEDVEPLGLVRSAKSKNALLKKMKDSDLDETKIITADVTAKDKSLEAAMSGCDAIILCTSAVPKIKPWSIVKVMFKKLLRKEDVGRPEFSFPENGTPEEV 139
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Match: A0A0M0K127_9EUKA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K127_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 4.320e-21 Identity = 60/117 (51.28%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 28 RVLVTGAGGRTGGKVVESLL-GQGVAMRGLVRSEKSKSKLEKLGLASEDILIADVTDPPTLATAMEGIDAVILCTSAVPKIYPFSIVKLLVKK-LFRYINPGRPNFYWCVNGEPETV 372 RVLVTGAGGRTG V E L + V GLVRS K+ L+K+G ++ AD T + AME DAV+LCTSAVPKI P SI KLL KK + R +PGRP F + +G P+ V Sbjct: 18 RVLVTGAGGRTGQLVFEQLQKDKSVQAVGLVRSRKAVKALKKVGAEPLQVVRADTTVLNEVTAAMENCDAVVLCTSAVPKIKPLSIAKLLFKKAILRSKDPGRPQFRFESDGTPQEV 134 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10270.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10270.1.1 >prot_D-mesarthrocarpus_Contig10270.1.1 ID=prot_D-mesarthrocarpus_Contig10270.1.1|Name=mRNA_D-mesarthrocarpus_Contig10270.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=122bp MSIEGVSRVLVTGAGGRTGGKVVESLLGQGVAMRGLVRSEKSKSKLEKLGback to top mRNA from alignment at D-mesarthrocarpus_Contig10270:26..1321- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10270.1.1 ID=mRNA_D-mesarthrocarpus_Contig10270.1.1|Name=mRNA_D-mesarthrocarpus_Contig10270.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1296bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10270:26..1321- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10270:26..1321- >mRNA_D-mesarthrocarpus_Contig10270.1.1 ID=mRNA_D-mesarthrocarpus_Contig10270.1.1|Name=mRNA_D-mesarthrocarpus_Contig10270.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=366bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10270:26..1321- (Discosporangium mesarthrocarpum MT17_79)back to top |