mRNA_D-mesarthrocarpus_Contig1027.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI) HSP 1 Score: 219 bits (557), Expect = 2.650e-65 Identity = 117/160 (73.12%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 1 MKFSTAVVALACVGSTNAFMMPTMGRTRYG--TTVMTAEKAPASRGEFLKSAVSASAVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
MKF+T V LACVGS +AF+ + R TT M+AE PASRG+FLKSA A+A+ GLAAP LAEVDNPVVP+LGG +KIDVNNANVRAYI+L GMYP+AAGKIVSNGPYSSVSEIY+IKGLS++EKAAIKK ESRF+ ++PQAMYTIDRINNGLYR
Sbjct: 1 MKFTT-VAVLACVGSASAFVPHALPAARMSARTTTMSAES-PASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA) HSP 1 Score: 181 bits (459), Expect = 6.230e-51 Identity = 96/159 (60.38%), Postives = 122/159 (76.73%), Query Frame = 1 Query: 1 MKFSTAVVALACVGSTNAFMMPTMGRTRYGTTVMTAEKAPASRGEFLKSAVSASAV-FGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
MK + A+V A G+ AF+ P+ G R MTA+ P R FLKSA +A+ V +AAP LAE+DNPVVP+LGG +K+D+NNANVRAYI++ GMYP AGK+VSNGPY++V+++YNIKGLS+KEK+ +KK+ESRFV LEPQ MY IDRINNGLYR
Sbjct: 1 MKVTGAIVLAAACGA-QAFVAPSAG-VRSTQLSMTAQ--PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN) HSP 1 Score: 154 bits (390), Expect = 3.510e-41 Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 1 Query: 124 SRGEFLKSAVSASAVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
+R FL A +AAP LA+ D +PYLGGS KID+NNAN+R Y +L GMYP AAGKI SNGPY SVS++YNIKGL D EKAAIKK+ESRF+ LEP MY IDR+NNGLYR
Sbjct: 21 TRRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.430e-39 Identity = 80/125 (64.00%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 103 TAEKAPASRGEFLKSAVSASAV-FGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
TA A A R EF A A+AV F AAP A VD + YLGGS +D+NNANVR Y+++ GMYP AAGKIVSNGPY SVS++YNI GL+ EK AIKK+ESRFVAL+P A Y IDRINNGLYR
Sbjct: 26 TALNAEAGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.220e-39 Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 133 EFLKSAVSASAVFGLAAP--VLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
E L S + SA LAAP +A+VD +PYLGGSEKID+NNANVR Y +L GMYPNAA KI SNGPY SVS++Y+IKGLS+KEK+ IKK+ESR + LEP AMY IDR NNGLYR
Sbjct: 41 EVLSSIAAGSA---LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.030e-37 Identity = 82/152 (53.95%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 22 VALACVGSTNAFMMPTMGRTRYGTTVMTAEKAPASRGEFLKSAVSAS-AVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
+ A V + AF P +T +T + AE A R EF SA +A+ FG+AAP A VD + YLGGS +D+NNANVR Y+++ GMYP AGKIVSNGPY+SVS++YNIKGL+ EK +KK+ESRF A P A Y IDRINNGLYR
Sbjct: 5 ILAALVSAAAAFTAP---QTVQQSTALNAE---AGRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A7S2TDD2_PROMC (PS II complex 12 kDa extrinsic protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TDD2_PROMC) HSP 1 Score: 144 bits (363), Expect = 2.140e-37 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1 Query: 88 GTTVMTAEKAPASRGEFL-KSAVSASAVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
GTT TA A A R EF K+A + +AV G AAP A +D + YLGGS +D+NNANVRAY+++ GMYP AGKIVSNGPY+SV +IY+IKGL+ E +KK+E RFVA P Y IDRINNGLYR
Sbjct: 2 GTTTSTALNAEAGRREFFSKAAAATAAVVGAAAPANAVIDYENIGYLGGSSIVDLNNANVRAYLKMPGMYPTVAGKIVSNGPYASVKDIYSIKGLTSAEADVLKKYEDRFVAKTPSPDYVIDRINNGLYR 131
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A7S3L326_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L326_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.300e-36 Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 31 ACVGSTNAFMMPTMGRTRYGTTVMTAEKAPASRGEFLKSAVSASAVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
A + + +AF+ P+ R +T + A+ R EFL +AV A+A + LA D + YLGGS+ ID+NNANVR Y++L GMYP+AAGKI +NGPY+SV +IYNI GL+ KEK +KK+ES+F AL+P A Y IDRINNGLYR
Sbjct: 8 ALLSAVSAFVAPSADR---ASTALAAD-----RREFLSAAVVAAAGLAVPGSALAVRDYENLAYLGGSDTIDINNANVRVYLKLPGMYPSAAGKIAANGPYNSVGDIYNIPGLTSKEKEVMKKYESKFTALKPSADYVIDRINNGLYR 147
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A7S4MT81_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MT81_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.470e-36 Identity = 82/159 (51.57%), Postives = 100/159 (62.89%), Query Frame = 1 Query: 1 MKFSTAVVALACVGSTNAFMMPTMGRTRYGTTVMTAEKAPASRGEFLKSA-VSASAVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
MK + LAC + ++ G TA A ASR EFL A + +AV AAP A D V +LGGS+ +DVNNANVR Y+++ GMYP AAGKI +NGPY SV++IYNI GL+ KEK +KK+ESRF AL P A Y IDRINNGLYR
Sbjct: 1 MKLAVLASTLACAAA--------FAPSQNGVPATTALNAEASRKEFLAGAFATGAAVVAGAAPAYAIRDYDNVAFLGGSQTVDVNNANVRVYLKMPGMYPAAAGKIAANGPYKSVADIYNISGLTAKEKEIMKKYESRFTALPPSADYVIDRINNGLYR 151
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Match: A0A6V2FDJ2_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FDJ2_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.500e-36 Identity = 72/125 (57.60%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 103 TAEKAPASRGEFLKSAVSAS-AVFGLAAPVLAEVDNPVVPYLGGSEKIDVNNANVRAYIRLTGMYPNAAGKIVSNGPYSSVSEIYNIKGLSDKEKAAIKKWESRFVALEPQAMYTIDRINNGLYR 474
TA A A R EF +A +A+ FG+AAP A VD + YLGGS +D+NNANVR Y+++ GMYP AGKIVSNGPY+SV+++Y IKGL++ EK +KK+ESRF A P Y IDRINNGLYR
Sbjct: 56 TALNADAGRREFFGTAAAAAIGAFGVAAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKEVLKKYESRFAAFTPSPDYVIDRINNGLYR 180 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1027.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1027.9.1 >prot_D-mesarthrocarpus_Contig1027.9.1 ID=prot_D-mesarthrocarpus_Contig1027.9.1|Name=mRNA_D-mesarthrocarpus_Contig1027.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=159bp MKFSTAVVALACVGSTNAFMMPTMGRTRYGTTVMTAEKAPASRGEFLKSAback to top mRNA from alignment at D-mesarthrocarpus_Contig1027:15428..18380- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1027.9.1 ID=mRNA_D-mesarthrocarpus_Contig1027.9.1|Name=mRNA_D-mesarthrocarpus_Contig1027.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2953bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:15428..18380- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1027:15428..18380- >mRNA_D-mesarthrocarpus_Contig1027.9.1 ID=mRNA_D-mesarthrocarpus_Contig1027.9.1|Name=mRNA_D-mesarthrocarpus_Contig1027.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=477bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:15428..18380- (Discosporangium mesarthrocarpum MT17_79)back to top |