mRNA_D-mesarthrocarpus_Contig1027.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1027.6.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 3.780e-7 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 16 GSILAGFLGAEASFAVKCATDKDAWSFKEQRRYALTHMCFVSF 144
G +LA FLG EA FA+KCATDK AW F QRR+AL ++ F+S+
Sbjct: 451 GGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSY 493
BLAST of mRNA_D-mesarthrocarpus_Contig1027.6.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 53.9 bits (128), Expect = 4.560e-6 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 16 GSILAGFLGAEASFAVKCATDKDAWSFKEQRRYALTHMCFVS 141
G LA FLG EA FA+KCATDK AW F QRR+AL ++ F+S
Sbjct: 463 GGPLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLS 504 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1027.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1027.6.1 >prot_D-mesarthrocarpus_Contig1027.6.1 ID=prot_D-mesarthrocarpus_Contig1027.6.1|Name=mRNA_D-mesarthrocarpus_Contig1027.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=110bp VGTARGSILAGFLGAEASFAVKCATDKDAWSFKEQRRYALTHMCFVSFVAback to top mRNA from alignment at D-mesarthrocarpus_Contig1027:13112..14015+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1027.6.1 ID=mRNA_D-mesarthrocarpus_Contig1027.6.1|Name=mRNA_D-mesarthrocarpus_Contig1027.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=904bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:13112..14015+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1027:13112..14015+ >mRNA_D-mesarthrocarpus_Contig1027.6.1 ID=mRNA_D-mesarthrocarpus_Contig1027.6.1|Name=mRNA_D-mesarthrocarpus_Contig1027.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=330bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:13112..14015+ (Discosporangium mesarthrocarpum MT17_79)back to top |