mRNA_D-mesarthrocarpus_Contig1027.5.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 179 bits (453), Expect = 3.480e-44 Identity = 112/255 (43.92%), Postives = 142/255 (55.69%), Query Frame = 1 Query: 793 DELGVVFS--PQPVDEGVSEGSLGNDGIT--------EP-FILQDHKLGVSMHSLHPLIVEARSKLFPARNAYMRLRLRARAGEEVKSVDNEGHPSKTPGPGKREHVVKTGQTLESTSKVEVVGESTVAERETDLVMAANELMSVTRAILLVNADHGSAWNARKVVIEDRSFR--DLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQRTWVVL 1518
+ELG++FS P P G + ++ T EP FILQ+HKLGVS+HS+HPLI EAR R Y RLR + H S+ P + K G+ +DL +AA L+SVTRA+LLVNADH SAWN RK ++ D + +E+KLLNL+ TKH+KS NAWAHRRWCW + R G T ++ V EL +C+RVAELYPKNYYAWTQR+WVVL
Sbjct: 21 EELGIIFSVPPPPTPAGPPADAACSEETTLSSADVAPEPQFILQEHKLGVSVHSIHPLINEARGAFPVTRREYRRLR--------------QAHSSRERMPSEESAKPKEGR----------------GGALSDLAVAAGTLLSVTRALLLVNADHASAWNTRKQLVVDGLCEGSSIPQEVKLLNLIFTKHAKSPNAWAHRRWCWRNNERFRARHAGSTWHQL-DVQEELNVCQRVAELYPKNYYAWTQRSWVVL 244
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 174 bits (440), Expect = 2.210e-42 Identity = 116/257 (45.14%), Postives = 145/257 (56.42%), Query Frame = 1 Query: 790 SDELGVVFS--PQPVDEGV---------SEGSLGNDGITEP-FILQDHKLGVSMHSLHPLIVEARSKLFPARNAYMRLRLRARAGEEVKSVDNEGHPSKTPGPGKREHVVKTGQTLESTSKVEVVGESTVAERETDLVMAANELMSVTRAILLVNADHGSAWNARKVVIEDRSFR--DLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQRTWVVL 1518
S+ELG++FS P P G + S +D EP FILQ+HKLGVS+HS+HPLI EAR+ AR Y RLR RA ++ + +E S P G+ G L + +AA L+SVTRA+LLVNADHGSAWN RK ++ D + +EIKLLNL+ TKH+KS NAWAHRRWCW R E + EL++C+RVAELYPKNYYAWTQR+WVVL
Sbjct: 31 SEELGIIFSVPPPPTPAGPPADAACPEETTPSSTDDVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLR---RAHSSLERMPSE--ESSKPKEGR-------GGALSG------------------VAVAAATLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCW-RNNERFRARHADITWHPLDEQEELKVCQRVAELYPKNYYAWTQRSWVVL 256
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A0H5RQV7_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RQV7_9EUKA) HSP 1 Score: 100 bits (250), Expect = 2.720e-19 Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 1180 ELMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFT---VHRELQLCERVAELYPKNYYAWTQRTWV 1512
ELM+ TRA+LL+N DH SAW R+ ++E L E++ LNLV +KHSKS AWA+RRW CR+ VF + EL+ C+R+ ++YP+NYYAW R W+
Sbjct: 99 ELMNATRAVLLINPDHYSAWTQRRRMVES-GLIGLLAELRFLNLVFSKHSKSGEAWAYRRWLLCRSA------------AVFDSDLIQSELKTCDRICDIYPRNYYAWCHRQWI 199
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: W7TZ90_9STRA (Protein prenyltransferase alpha subunit repeat containing 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZ90_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.080e-18 Identity = 79/251 (31.47%), Postives = 111/251 (44.22%), Query Frame = 1 Query: 856 GNDGITEPFILQDHKLGVSMHSLHPLIVEARSKLFPARNAYMRLRLRARAGEEVKSVDNEGHPSKTPGPGKREHVVKTGQTLESTSKVEVVGESTVAERETDLVMAANELMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQE---------EEDR---MGGETREKVFTVH--------------RELQLCERVAELYPKNYYAWTQRTWVVLNHFR 1530
G D ++ PF+L++HKLG++ ++ + EA S + LRA E + D EG P R D A+ L TRA+LL+NAD SAWN RK ++ R EEI L++VL KHSK +AWAHRRWC E E R M ++E+ T+ +E+ + ++A L+P+NYYAWTQR WV+L R
Sbjct: 51 GKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYS---------LRAARTEALIGNDKEGPP-----------------------------------RNGD----ADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLR-AHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLR 252
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A6A7GFL8_9CRUS (Protein prenyltransferase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GFL8_9CRUS) HSP 1 Score: 98.2 bits (243), Expect = 5.300e-18 Identity = 82/260 (31.54%), Postives = 116/260 (44.62%), Query Frame = 1 Query: 793 DELGVVFSPQPV----DEGVSEGSLGNDGITEPFILQDHKLGVSMHSLHPLIVEARSKLFPARNAYMRLRLRARAGEEVKSVDNEGHPSKTPGPGKREHVVKTGQTLESTSKVEVVGESTVAERETDLVMAANELMSVTRAILLVNADHGSAWNARKVVIEDRSFR-DLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHR--------------ELQLCERVAELYPKNYYAWTQRTWVV 1515
DELG+V + ++ S +DG PFI ++HKLG+S L P + + LF L A + KS L+ VE+ STV E+ TR ILL+NAD AWN RK +I+ +FR +EI+ +NLV +KH KS AW+HRRW + ++ E R + + H E+++C +VAE+YPKNYYAWT R W+V
Sbjct: 37 DELGLVVRASELLFGGNDSKESDSAADDGKGPPFICREHKLGISSWCL-PDLYRFATNLF----------LSLIANIDFKS-------------------------LQCLHNVEI---STV-----------KEIHDSTRIILLINADSYRAWNVRKFLIQ--AFRLKTDDEIRFMNLVFSKHPKSGEAWSHRRWVLRQVKDFESRNSKQLSDVSSQPHSSNVDDFVRNDHFSTEIRICAQVAEIYPKNYYAWTHRQWLV 244
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: C3ZXJ3_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZXJ3_BRAFL) HSP 1 Score: 90.5 bits (223), Expect = 4.480e-16 Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 1150 RETDLVMAANELMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETR-----------EKVFTVHRELQLCERVAELYPKNYYAWTQRTWVVLN 1521
R+ + +A L+ TRA+LLV AD +AWN RK ++E + +Q+ +K LVLTKH KSS +AHRRW + ++ + EK+ EL +C+R AE YP NYYAWT R WVV N
Sbjct: 77 RKIKVSRSARSLLEATRAVLLVQADCLTAWNIRKELVEAEDLKSIQD-LKFAALVLTKHPKSSETFAHRRWLLKQVVQKTSSTSLQPHPRGRKAELPCDEKLLEA--ELAVCQRSAERYPSNYYAWTHRAWVVEN 208
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A1V9Y8M9_9STRA (Drug/Metabolite Transporter (DMT) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8M9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.920e-14 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 1183 LMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLTKHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQR 1503
++ +RAILLV AD+ +AWNARK ++ + D+ EE K +NLVL+ HSKS + WAHRRW DR +++ F + +EL LC R+ ELYP+NY+AW+ R
Sbjct: 311 IIQASRAILLVCADYYTAWNARKKLLV-QGHLDMLEEFKFMNLVLSHHSKSIDTWAHRRWML-------DRFIPLSKDAEF-LQKELALCLRLTELYPRNYHAWSYR 408
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A8H7PUS4_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PUS4_9FUNG) HSP 1 Score: 82.0 bits (201), Expect = 4.960e-13 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1195 TRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLT--KHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQRTWVV 1515
++ + +VN DH +A N RK +++ + D Q+E+ L++L+ T KHSKSS AW HR+W +E+ +V +RE LCER A LYP+NYYAWT R W++
Sbjct: 66 SKVLFMVNPDHYTAANTRKSLVQS-NIVDAQKELALVDLMFTIPKHSKSSIAWHHRKWIQNYLIKEKG--------QVLDFNRERDLCERTATLYPRNYYAWTYRYWLL 165
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A2N1NXE2_9GLOM (Protein prenylyltransferase n=2 Tax=Rhizophagus TaxID=1129544 RepID=A0A2N1NXE2_9GLOM) HSP 1 Score: 81.3 bits (199), Expect = 6.050e-13 Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 1183 LMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLT--KHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQRTWVVLN 1521
L TR ++++NAD SA N RK +I D D E+K ++L+ T KH+K S W HR+W R Q+ + + E+ + RVAELYPKNYYAWT R W++LN
Sbjct: 18 LKDSTRCMVIINADCYSALNTRKKLIIDNHI-DPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHF------SSNDISQWQYEINITRRVAELYPKNYYAWTYRHWILLN 125
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Match: A0A015LZB4_RHIIW (Bet4p n=5 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015LZB4_RHIIW) HSP 1 Score: 81.3 bits (199), Expect = 8.310e-13 Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 1183 LMSVTRAILLVNADHGSAWNARKVVIEDRSFRDLQEEIKLLNLVLT--KHSKSSNAWAHRRWCWCRAQEEEDRMGGETREKVFTVHRELQLCERVAELYPKNYYAWTQRTWVVLN 1521
L TR ++++NAD SA N RK +I D D E+K ++L+ T KH+K S W HR+W R Q+ + + E+ + RVAELYPKNYYAWT R W++LN
Sbjct: 18 LKDSTRCMVIINADCYSALNTRKKLIIDNHI-DPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHF------SSNDISQWQYEINITRRVAELYPKNYYAWTYRHWILLN 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1027.5.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1027.5.3 >prot_D-mesarthrocarpus_Contig1027.5.3 ID=prot_D-mesarthrocarpus_Contig1027.5.3|Name=mRNA_D-mesarthrocarpus_Contig1027.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=245bp MHSLHPLIVEARSKLFPARNAYMRLRLRARAGEEVKSVDNEGHPSKTPGPback to top mRNA from alignment at D-mesarthrocarpus_Contig1027:8551..12944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1027.5.3 ID=mRNA_D-mesarthrocarpus_Contig1027.5.3|Name=mRNA_D-mesarthrocarpus_Contig1027.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4394bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:8551..12944+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1027:8551..12944+ >mRNA_D-mesarthrocarpus_Contig1027.5.3 ID=mRNA_D-mesarthrocarpus_Contig1027.5.3|Name=mRNA_D-mesarthrocarpus_Contig1027.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=735bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1027:8551..12944+ (Discosporangium mesarthrocarpum MT17_79)back to top |