mRNA_D-mesarthrocarpus_Contig10266.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 260 bits (664), Expect = 1.410e-81 Identity = 127/269 (47.21%), Postives = 178/269 (66.17%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLAIVWPNN-DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 SW + +PM++ TF+ RFRMDY F D+LRPKL R+ M LRNG++ E+ LA L +L+GGS FE+MDG+ + STAY+++ R ++ IN +L VWP D LD +R RS G++ CVGA+DG F+ + +P ++ FYSGH KGFG+N Q +C+ARY A ++ P S ND TA+ S + ++ LP G +I+GDAAYP SD++ PYPGT +DA+NF+ SQARI+++QAFGI+V TWGILW+PL Sbjct: 52 SWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPL 319
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 254 bits (648), Expect = 4.370e-79 Identity = 126/268 (47.01%), Postives = 172/268 (64.18%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLAIVWPNNDRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 S+ ++RPM+E +TF++RFRMDY F D+LRPKL RD +M LRNG + E+ LA TL +L+GGS FE+MD + + STAY+++ R ++ IN L WP D + A +R RS G++ RCVGA+DG F+ + P +K FYSGH K FG+N Q IC+A Y ++ P S ND TA+ S + + +P I+GDAAYP S+R+ P PGT L +DA+NF+ SQARI+++QAFGILV TW ILWKPL Sbjct: 56 SFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPL 323
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 197 bits (500), Expect = 9.130e-58 Identity = 93/203 (45.81%), Postives = 130/203 (64.04%), Query Frame = 1 Query: 196 GGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLAIVWPNNDRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 GGS FE+MDG + STAY+++ R ++ IN + VWP D +R RS ++ CVGA+DG F+LI +P ++ FYSGH KGFG+N Q +C+ARY TA ++ P S ND TA+ S + ++ LP G +I+GD AYP SD++ PYPGT +D++NF+ SQARI ++QAFG +V TWGILW+PL Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPL 253
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.590e-53 Identity = 106/272 (38.97%), Postives = 151/272 (55.51%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLR--NGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLA-IVWPNN-DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W EH++ + F+R +RM+ SF +LLRP L R+ A LR +G V + LA L +G SY ++ + + ++V+ + ++ IN+ P + +P + A + +S G CV A DG F+ P V P F+SGH G+GLN+Q CDA Y F + STND TAW+ S + V LP G++++GDAAYP SD+L TPYPG D+DAFNF+ SQ R+ ++QAFGILV WGILW+PL Sbjct: 70 DWEEHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILVGQWGILWRPL 341
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.460e-53 Identity = 107/272 (39.34%), Postives = 150/272 (55.15%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMAN--LRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDL-AIVWPNN-DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W EH+R + F+R +RM+ SF +LLRP L + A R+G V + LA L L+G SY ++ + T + VL ++ IN+ P++ A +P D A + A+S G+ CV A DG F+ P P ++SG+ G+GLN+Q CDA Y F + +TND TAW+ S++ V LP GY+++GDAAYP SD L TPYPG DED+FNF SQ R+ ++QA+GILV WGILW+PL Sbjct: 71 DWEEHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRPL 342
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE) HSP 1 Score: 184 bits (468), Expect = 5.320e-52 Identity = 106/272 (38.97%), Postives = 150/272 (55.15%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMAN--LRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLA-IVWPNN-DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W EH+R + F+R +RM+ F DLLRP L R+ A R+G V + LA L L+G SY ++ + T + VL ++ IN+ P++ +P + A + A+S G + CV A DG F+ P P ++SG+ G+GLN+Q CDA Y F + +TND TAW+ S + V LP GY+++GDAAYP SD+L TPYPG D+DA+NF+ SQ R+ ++QAFGILV WGILW+PL Sbjct: 73 DWDEHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILVGQWGILWRPL 344
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.240e-51 Identity = 107/273 (39.19%), Postives = 149/273 (54.58%), Query Frame = 1 Query: 1 SWIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLR--NGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDL-AIVWPNN--DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W EH + E F+R +RM +F+ +LL P L + A LR NG ++ + LA L L+G SY ++ T Y+ L ++ INS P++ A +P D H AA F+ +S GI CV VDG F+ P K +YSG +G+N+Q +C A Y F + P +TND AW S + V LP G++++GDAAYP S++L TPYPG L ED+FNF SQ R+ ++Q+FGILV TWGILW+PL Sbjct: 69 DWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGH-AARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPL 340
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE) HSP 1 Score: 177 bits (448), Expect = 4.910e-49 Identity = 104/272 (38.24%), Postives = 148/272 (54.41%), Query Frame = 1 Query: 4 WIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLR---NGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLA-IVWPNNDR-LDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W +H + + ++R +R++ SF +LLRP L LR NG +A E +A L L+ SY++++ S + Y VL ++ IN+ P + +P ++ A F+ +S GI V AVDG FI P K +YSG +G+N+Q +C A Y F A P STND AW+ S++ V LP G+HIIGDAAYP ++L TPYPG + ED+FNF SQ R+ ++Q+FGILV TWGILW+PL Sbjct: 82 WAQHEADLDKRRGWRRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSPRNGAIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPL 353
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 176 bits (446), Expect = 1.050e-48 Identity = 105/271 (38.75%), Postives = 147/271 (54.24%), Query Frame = 1 Query: 4 WIEHIRPMLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMAN--LRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDLA-IVWPNN-DRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W +H + + +R +RM+ F LL P L A R G V+ + LA L ++G SY + S TA+S+L + ++ INS ++ +P + D AA + +S G V A DG F+ P P +YSG G+G+N+Q CDA Y F + P STND TAW+ S++ + V+ LP G++++GDAAYP SD L TPYPG LD+DAFNF+ SQ R+ ++QAFGILV WGILWKPL Sbjct: 77 WEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPL 347
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.300e-48 Identity = 105/273 (38.46%), Postives = 152/273 (55.68%), Query Frame = 1 Query: 4 WIEHIRPMLEGHTFQRRFRMDYLSFKFFYDL--LRPK--LNRDVEMANLRNGLVAGEWALASTLGWLSGGSYFEMMDGSTTSCSTAYSVLQRTLEIINSCPDL-AIVWP-NNDRLDHVAAGFRARSRQGIMDRCVGAVDGFFILIHKPHVKGQPAAARFYSGHNKGFGLNLQEICDARYIFTAGCISLPTSTNDTTAWDMSNVKSKVEVLPDGYHIIGDAAYPPSDRLPTPYPGTRHCLDEDAFNFFHSQARIAVDQAFGILVMTWGILWKPL 804 W +H + + H ++R +RM+ SF +L LR K L+ + + NG +A E +A+ L L+GGSY+++ S + + +L + ++ IN P + A +P + A F+ +S GI V AVDG FI P+ K +YSG +G+N+Q +C A Y F A P STND AW+ S++ V LP G+HIIGDAAYP ++L TPYPG ED+FNF SQ R+ ++Q+FGILV TWGILW+PL Sbjct: 78 WAQHEADLDKRHGWRRSYRMEKGSFHKLVELSALRWKSTLSSAQALRSPTNGAIAVEVRVAAALRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTDGIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPL 350 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10266.1.1 >prot_D-mesarthrocarpus_Contig10266.1.1 ID=prot_D-mesarthrocarpus_Contig10266.1.1|Name=mRNA_D-mesarthrocarpus_Contig10266.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=260bp MLEGHTFQRRFRMDYLSFKFFYDLLRPKLNRDVEMANLRNGLVAGEWALAback to top mRNA from alignment at D-mesarthrocarpus_Contig10266:2044..2984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10266.1.1 ID=mRNA_D-mesarthrocarpus_Contig10266.1.1|Name=mRNA_D-mesarthrocarpus_Contig10266.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=941bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10266:2044..2984+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10266:2044..2984+ >mRNA_D-mesarthrocarpus_Contig10266.1.1 ID=mRNA_D-mesarthrocarpus_Contig10266.1.1|Name=mRNA_D-mesarthrocarpus_Contig10266.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=780bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10266:2044..2984+ (Discosporangium mesarthrocarpum MT17_79)back to top |