mRNA_D-mesarthrocarpus_Contig10263.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: D8LHY4_ECTSI (Geranyl-diphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY4_ECTSI) HSP 1 Score: 176 bits (447), Expect = 4.930e-50 Identity = 95/155 (61.29%), Postives = 112/155 (72.26%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRTH 468 KNYY+T S+MANSCKA+A+ G+H EV + + + K VGLAFQLVDD+LDFEG+ TL KP LNDLRQGL TAPVLLAA++QP L LI RKF G+ DEAL LV DGI RAK+V QAE AM AI L S + +LVQL HK+VNR H Sbjct: 360 KNYYKTGSLMANSCKASAVLGQHDLEVQEV-AFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQPGLAKLISRKFRGPGDVDEALELVHRSDGIARAKEVAVVQAEKAMSAILTLHDSPAQNALVQLAHKIVNRNH 513
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A7S2B533_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B533_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.920e-42 Identity = 86/161 (53.42%), Postives = 107/161 (66.46%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVM------ETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRTH 468 KNYY+T S+MANSCKAAAI H + + +++ KHVGLAFQL+DDVLD EG + +L KP L DL GL TAPVLLAA+E PRL LI+RKF G+ DE L LVE G+ RAKD+ QA+ A+EAI + SS R++L L +KVV R H Sbjct: 273 KNYYKTGSLMANSCKAAAILSAHDNTDPAVIAAQAEAAFSYGKHVGLAFQLIDDVLDMEGSVQSLGKPALADLGAGLATAPVLLAAEEFPRLQVLIERKFKEPGDVDETLRLVERSQGMTRAKDLATAQADMALEAILIMEPSSARDALAHLAYKVVTRNH 433
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A7S2SRE0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRE0_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.320e-42 Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KNYY+T S+MANSCKAA + G G V +A+ KH+GLAFQLVDDVLDFEG + +L KP L DLR GL TAPVLLA ++ P L LI RKF G+ ++AL VEA DG++R KD+ QA+ AM++I L S RE+L L KVV R+ Sbjct: 222 KNYYKTGSLMANSCKAAVVLGG-GSAVDQDIAFAYGKHIGLAFQLVDDVLDFEGTVESLGKPALADLRAGLVTAPVLLAVEKHPELQSLIDRKFSEPGDVEKALACVEASDGLERTKDLAVAQADLAMDSIMQLPPSEAREALAHLAFKVVARS 374
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: B7GCY9_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCY9_PHATC) HSP 1 Score: 149 bits (375), Expect = 4.700e-41 Identity = 83/154 (53.90%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KN+Y+T S+MANSCK+AA+ GE+ +E+ V ++ + KHVG+AFQLVDDVLDFEG L +L KP L DL GL TAPVL AA+E L LI RKF +G+ + A+ V GI+R K++ R AE+AM+AI L S R+SLV L +KVV RT Sbjct: 172 KNFYKTGSLMANSCKSAALLGEYPNEL-VDASYRFGKHVGMAFQLVDDVLDFEGSLSSLGKPALADLTAGLATAPVLFAAEECCDLEPLIDRKFRNTGDIERAVEYVFQSSGIERTKELARVHAESAMDAILELDSSLHRDSLVHLANKVVART 324
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A3G5BBX7_HASOS (Trans-prenyltransferase 4 n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBX7_HASOS) HSP 1 Score: 151 bits (382), Expect = 7.860e-41 Identity = 80/155 (51.61%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRTH 468 KN+Y+T S+MANSCK+ AI G + E+ VM ++ + KHVG+AFQLVDD+LDFEG+L L KP L+DL+ GL TAPVL A+ E P L L+ RKF G+ + A+ V +G++R K++ R AE AMEA L S R++LV L HKVV+RT+ Sbjct: 318 KNFYKTASLMANSCKSVAILGSYPSEM-VMASYEYGKHVGIAFQLVDDILDFEGNLSQLGKPALSDLKAGLSTAPVLFASSEFPELELLMDRKFKEDGDVERAVEYVFDSNGLRRTKELARVHAELAMEAALSLESSIYRDALVHLAHKVVSRTN 471
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A1E7FF27_9STRA (Terpenoid synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FF27_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.090e-40 Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KNYY+T S+MANSCK+ A+ E E+ V+ ++ + K VG+AFQLVDDVLDFEGD+ ++ KP L DLR GL TAPVL AA+E P L ++ RKF G+ +++ LV GI+R K++ R AE AMEAI S R++L+ L +KVV RT Sbjct: 148 KNYYKTASLMANSCKSTALLAECSPEL-VLASYNYGKSVGMAFQLVDDVLDFEGDVKSMGKPALADLRAGLSTAPVLFAAEEYPELEVMMDRKFKEDGDVEKSRELVLQSQGIERTKELARVHAERAMEAILPWDESEHRDALINLAYKVVQRT 300
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A836CLR5_9STRA (Geranyl-diphosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR5_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.650e-40 Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVM-ETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNR 462 K YY+T S+MANSC+AAA+ G G V + + K VGLAFQL+DDVLDFEG +L KP LNDL++GL TAPVLLAA+E P L D++ RKFG G+A A LV DGI RA+D+ QAE AM+A L+ S ER++LV L +VV+R Sbjct: 290 KTYYKTGSLMANSCQAAALLG--GSPAAVQRDAHEYGKRVGLAFQLIDDVLDFEGSDASLGKPALNDLKEGLATAPVLLAAEEHPALLDMVARKFGRDGDAAAAHELVLRSDGIARARDLAIVQAELAMDAATRLAPSEERDALVALAARVVDR 441
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A4D9DEU4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEU4_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.080e-39 Identity = 81/155 (52.26%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQP-RLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KN+Y+T S+MANSC+AA + G + + +A+ +HVGLAFQLVDDVLDFE TL KP LNDLR GL TAPVLLAA+ P + D+++RKF + G+ + AL LV+ DG+K+AKD+ QAE AMEA ++ S R+ L++L VVNRT Sbjct: 314 KNFYKTGSLMANSCRAAVLLAGGGDALQY-QAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRHGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERALDLVQRSDGLKKAKDLALVQAEQAMEAALTMNPSPARDGLIKLASLVVNRT 467
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A448ZER3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZER3_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.650e-39 Identity = 78/154 (50.65%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KNYY+T S+MANSCK+AA+ E E+ V+ + + KHVG+AFQLVDDVLDFEGD+ ++ KP L DL+ GL TAPVL AA+E P+L ++ RKF G+ + + LV GI+R K++ R AE AMEAI + R++L+ L +KVV RT Sbjct: 371 KNYYKTGSLMANSCKSAALLAECPPEL-VVAAYKYGKHVGMAFQLVDDVLDFEGDVKSMGKPALADLKAGLSTAPVLFAAEEYPQLEAMMDRKFKEDGDVETSRALVLQSRGIERTKELARVHAERAMEAILPWEATEHRDALINLAYKVVQRT 523
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Match: A0A7S0YCV0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0YCV0_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.000e-39 Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 1 Query: 4 KNYYQTQSVMANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLCKPVLNDLRQGLGTAPVLLAAQEQPRLYDLIQRKFGASGEADEALGLVEALDGIKRAKDVVRFQAEAAMEAIFHLSYSSERESLVQLGHKVVNRT 465 KNYY+T S+MANSCK+AA+ E E+ V+ + + KHVG+AFQLVDDVLDFEGD+ ++ KP L DLR GL TAPVL AA+E P L ++ RKF G+ ++ L+ GI+R K++ R AE AMEAI + R++L+ L +K+V RT Sbjct: 306 KNYYKTGSLMANSCKSAALLAECSPEL-VVAAYKYGKHVGMAFQLVDDVLDFEGDVKSMGKPALADLRAGLSTAPVLFAAEEFPELEIMMDRKFKEDGDVKKSRDLILQSQGIERTKELARVHAERAMEAILPWEATEYRDALINLAYKIVQRT 458 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10263.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10263.1.1 >prot_D-mesarthrocarpus_Contig10263.1.1 ID=prot_D-mesarthrocarpus_Contig10263.1.1|Name=mRNA_D-mesarthrocarpus_Contig10263.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=147bp MANSCKAAAIPGEHGHEVGVMETWAWNKHVGLAFQLVDDVLDFEGDLLTLback to top mRNA from alignment at D-mesarthrocarpus_Contig10263:2527..4415+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10263.1.1 ID=mRNA_D-mesarthrocarpus_Contig10263.1.1|Name=mRNA_D-mesarthrocarpus_Contig10263.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1889bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10263:2527..4415+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10263:2527..4415+ >mRNA_D-mesarthrocarpus_Contig10263.1.1 ID=mRNA_D-mesarthrocarpus_Contig10263.1.1|Name=mRNA_D-mesarthrocarpus_Contig10263.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=441bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10263:2527..4415+ (Discosporangium mesarthrocarpum MT17_79)back to top |