mRNA_D-mesarthrocarpus_Contig10257.1.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A6H5JTR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR6_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.810e-62 Identity = 119/216 (55.09%), Postives = 142/216 (65.74%), Query Frame = 1 Query: 478 SSSLEGKLFIYSRKKRLAAFQSGCH----------------HKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGT------------TEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG-DLMPREAEEVPITAQRYLSLTAR 1038 S SL G+LF+YS KKRLAAF+SGCH ++++AVFVPGLTDGLL++DYVP LA L+RLGF+FV PVLSSSYQGYGTSSLRQDVEELDELL +++ + + LLIGHSTGCQDAV YM+ G LR V GVVLQAPVSDRE P T +E AR G +LMP A++ PITA R+LSL + Sbjct: 34 SMSLHGELFVYSPKKRLAAFRSGCHGGGSSSSDRQSRQQRHNRKHAVFVPGLTDGLLALDYVPELAAALDRLGFAFVQPVLSSSYQGYGTSSLRQDVEELDELLDYLSSTPSPPVPEVASSDAGSSSSSSFLLIGHSTGCQDAVFYMKHGRPDLRAAVVGVVLQAPVSDREYLETLPSTEGFIEEARVRGGGGELMPVAADQAPITAARFLSLATK 249
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A843TQ87_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TQ87_COLES) HSP 1 Score: 196 bits (497), Expect = 4.680e-56 Identity = 115/212 (54.25%), Postives = 143/212 (67.45%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G ++ +F+ GLTDGLL+ +Y+ L+ LE +S V P+LSSSY GYGTSSL+QD ELD+L+S++ + +EG V+L+GHSTGCQD V YMR S R V G +LQAPVSDRE RA PGTA M++LA SM DLMPR+A+ E PITA RY SL A GDDDMFSSDLT +L R+GHM Sbjct: 60 LHGVLFKYGPKSVQVAFKTG-DFRQQVIFIGGLTDGLLATEYLEPLSIALENEKWSLVQPLLSSSYIGYGTSSLKQDSLELDQLISYLINKENSEG---VVLLGHSTGCQDIVHYMRSNSACSRA-VRGAILQAPVSDREYRATLPGTAAMIDLASSMINDGRGMDLMPRDADPEAPITAYRYHSLCAYMGDDDMFSSDLTDDQLRLRLGHM 266
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: D5ABA5_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ABA5_PICSI) HSP 1 Score: 189 bits (481), Expect = 2.940e-54 Identity = 110/212 (51.89%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPGD----LMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G K+ +F+ GLTDGLL+ +Y+ L+ LE +S V P+LSSSY GYGTSSL+QD ELD+L+S++ + +EG V+L+GHSTGCQD V YMR + + +LQAPVSDRE RA P TADM++LA SM D LMPREA + PITA RY SL A GDDDMFSSDL+ +L ++GHM Sbjct: 11 LSGMLFKYGTKPAQVAFRTG-DFKQQVIFIGGLTDGLLATEYLQPLSMALEVEKWSLVQPLLSSSYSGYGTSSLKQDALELDQLISYLINKEGSEG---VVLLGHSTGCQDIVHYMRSNTACSKA-ARAAILQAPVSDREYRATLPETADMIDLAASMIKEDRAMDLMPREANPDAPITAYRYYSLCAYMGDDDMFSSDLSDDQLRLKLGHM 217
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A7I8L864_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L864_SPIIN) HSP 1 Score: 190 bits (482), Expect = 6.340e-54 Identity = 112/212 (52.83%), Postives = 141/212 (66.51%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G ++ +F+ GLTDGLL+ +Y+ +L+ LE+ +S V P+LSSSY GYG SSL+QD ELD L+SH+ + +EG V+L+GHSTGCQD V YMR S R V G +LQAPVSDRE RA P TA M++LA +M DLMPR A+ + PITA RY SL A GDDDMFSSDLT +L R+GHM Sbjct: 51 LPGVLFKYGPKAVQVAFKTG-DFRQQVIFIGGLTDGLLATEYLESLSVALEKERWSLVQPLLSSSYTGYGISSLKQDSMELDLLISHLINKENSEG---VVLLGHSTGCQDIVYYMRSNSACSRA-VRGAILQAPVSDREYRATLPETAAMIDLASTMISENKATDLMPRNADPDAPITAYRYHSLCAYMGDDDMFSSDLTDDQLRLRLGHM 257
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A836C982_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C982_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.060e-53 Identity = 111/208 (53.37%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 484 SLEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPGDLMPREAEEVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 SLEG+LF Y + L AFQ G H V + GLTDG LS+ Y ALA L+ +S V P LS+SY GYG SL QD +EL +LLS + EGR ++L+GHSTGCQ +V +M+ Q R RV GVVLQA VSDR+ A P T ++V LAR++ LMPREA+ PITA RYLSL ARGGDDDMFS D + EL R+GHM Sbjct: 14 SLEGRLFRY--RPGLVAFQHG-RHNDCLVLLGGLTDGPLSLKYSTALAAALDVQSWSLVLPTLSTSYLGYGVGSLTQDCDELVDLLSCLP----AEGR--IVLMGHSTGCQISVHFMKHAPQAARKRVAGVVLQAAVSDRDYLATLPQTQELVTLARTLPLTALMPREADIAPITAYRYLSLAARGGDDDMFSDDFSQEELKDRLGHM 212
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: UPI0019D52022 (UPF0613 protein PB24D3.06c-like isoform X2 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D52022) HSP 1 Score: 188 bits (478), Expect = 1.090e-53 Identity = 110/212 (51.89%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G + + +F+ GLTDGLL+ DY+ L+ LE +S V P+LSSSY GYG SSL QD ELD+L+S++ + +EG V+L+GHSTGCQD V YMR + V GV+LQAPVSDRE RA P TA+M++LA M DLMPREA + PITA RY SL + GDDDMFSSDL+ +L R+GHM Sbjct: 61 LRGALFKYGPKSAQVAFRTGDFNHQ-VIFIGGLTDGLLATDYLEPLSIALEVEKWSLVQPLLSSSYSGYGISSLEQDALELDQLISYLINKENSEG---VILLGHSTGCQDIVHYMRTNFACSKA-VSGVILQAPVSDREYRATLPETAEMIDLAAKMITEGRGMDLMPREANPDAPITAYRYHSLCSYMGDDDMFSSDLSEDQLRQRLGHM 267
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A6A1VN51_9ROSI (UPF0613 protein PB24D3.06c n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VN51_9ROSI) HSP 1 Score: 189 bits (481), Expect = 1.230e-53 Identity = 110/210 (52.38%), Postives = 140/210 (66.67%), Query Frame = 1 Query: 493 GKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAP----GDLMPREAEEV-PITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 G LF Y K AF++G +K+ +F+ GLTDG L+ +Y+ LA LE ++ V P+LSSSY GYGTSSL+QD ELD+L+SH + +EG V+L+GHSTGCQD V YMR + R V G +LQAPVSDRE RA P TA M++LA +M +LMPREA+ + PITA RY SL A GDDDMFSSDL+ +L R+GHM Sbjct: 65 GVLFKYGPKPVQVAFKTG-DYKQQVIFIGGLTDGFLATEYLEPLANALENEKWALVQPLLSSSYSGYGTSSLQQDAMELDQLISHFINKEDSEG---VVLLGHSTGCQDIVHYMRTNAACSRA-VRGAILQAPVSDREYRATLPETAAMIDLAFTMISEGRGSELMPREADPLSPITAHRYHSLCAYMGDDDMFSSDLSDDQLRLRLGHM 269
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A200PXP6_9MAGN (Uncharacterized protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PXP6_9MAGN) HSP 1 Score: 188 bits (478), Expect = 2.000e-53 Identity = 109/210 (51.90%), Postives = 139/210 (66.19%), Query Frame = 1 Query: 493 GKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 G LF Y K AF++G K+ +F+ GLTDG L+ DYV L+ L++ +S V P+LSSSY GYGTSSL+QD ELD+L+S++ + +EG V+L+GHSTGCQD V YMR + R V + QAPVSDRE RA P TA+M++LA +M DLMPR+A + PITA RY SL A GDDDMFSSDLT +L R+GHM Sbjct: 45 GVLFKYGPKPAQVAFKTG-DFKQQVIFIGGLTDGFLATDYVEPLSIALQKEKWSLVQPLLSSSYTGYGTSSLKQDAMELDQLISYLINKEDSEG---VVLLGHSTGCQDIVHYMRTNAACSRA-VRAAIFQAPVSDREYRATLPETAEMIDLASTMINEGRGMDLMPRQANPDAPITAYRYHSLCAYMGDDDMFSSDLTDDQLKTRLGHM 249
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: UPI0009E2DC82 (UPF0613 protein PB24D3.06c isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2DC82) HSP 1 Score: 188 bits (478), Expect = 2.920e-53 Identity = 111/212 (52.36%), Postives = 141/212 (66.51%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G +++ +F+ GLTDGLL+ +Y+ L+ LE L +S V P+LSSSY GYGTSSL QD EL++L+ + + +EG V+L+GHSTGCQD V YMR R V GV+LQAPVSDRE RA P TA+M++LA SM DLMPREA + PITA RY SL A GDDDMFSSDL+ +L ++GHM Sbjct: 57 LPGVLFKYGPKSVQVAFRTGDFNQQ-VIFLGGLTDGLLATEYLEPLSVALENLNWSLVQPLLSSSYVGYGTSSLEQDAVELNQLIGYFINKENSEG---VVLLGHSTGCQDIVHYMRTNFAFSRA-VRGVILQAPVSDREYRATLPETAEMIDLALSMMNEGRSMDLMPREANPDAPITAYRYHSLCAYMGDDDMFSSDLSEDQLRTKLGHM 263
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Match: A0A1B6Q9S3_SORBI (Uncharacterized protein n=2 Tax=Panicoideae TaxID=147369 RepID=A0A1B6Q9S3_SORBI) HSP 1 Score: 186 bits (473), Expect = 3.050e-53 Identity = 109/212 (51.42%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 487 LEGKLFIYSRKKRLAAFQSGCHHKRYAVFVPGLTDGLLSVDYVPALAEVLERLGFSFVTPVLSSSYQGYGTSSLRQDVEELDELLSHITGRGTTEGRGDVLLIGHSTGCQDAVAYMREGSQILRGRVCGVVLQAPVSDRESRAMHPGTADMVELARSMAPG----DLMPREAE-EVPITAQRYLSLTARGGDDDMFSSDLTPRELSHRIGHM 1107 L G LF Y K AF++G + + +F+ GLTDGLL+ DY+ L+ LE +S V P+LSSSY GYG SSL QD ELD+L+S++ + +EG V+L+GHSTGCQD V YMR + V GV+LQAPVSDRE RA P TA+M++LA M +LMPREA + PITA RY SL + GDDDMFSSDL+ +L R+GHM Sbjct: 60 LRGALFKYGPKSAQVAFRTGDFNHQ-VIFIGGLTDGLLATDYLEPLSLALEVEKWSLVQPLLSSSYTGYGISSLEQDALELDQLISYLINKENSEG---VILLGHSTGCQDIVHYMRTNFACSKA-VSGVILQAPVSDREYRATLPETAEMIDLAAKMISEGRGMELMPREANPDAPITAYRYHSLCSYMGDDDMFSSDLSEDQLRQRLGHM 266 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10257.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10257.1.3 >prot_D-mesarthrocarpus_Contig10257.1.3 ID=prot_D-mesarthrocarpus_Contig10257.1.3|Name=mRNA_D-mesarthrocarpus_Contig10257.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=248bp MRVPYCKFCVGAVVIHTSVSALRTSAARWTSWVTATMSSSSLEGKLFIYSback to top mRNA from alignment at D-mesarthrocarpus_Contig10257:35..2485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10257.1.3 ID=mRNA_D-mesarthrocarpus_Contig10257.1.3|Name=mRNA_D-mesarthrocarpus_Contig10257.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2451bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10257:35..2485- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10257:35..2485- >mRNA_D-mesarthrocarpus_Contig10257.1.3 ID=mRNA_D-mesarthrocarpus_Contig10257.1.3|Name=mRNA_D-mesarthrocarpus_Contig10257.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=744bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10257:35..2485- (Discosporangium mesarthrocarpum MT17_79)back to top |