mRNA_D-mesarthrocarpus_Contig10250.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: D8LFA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFA3_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.080e-27 Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 2 Query: 935 GCGGRLADVSDANGEKKSRPI------GRPVGSKNK--------------RKGIEKGKQPSFIASSRPRRETTAPERWVD--VDPGEQLLR------RPKPXXXXNPADGDIREAPTFWPTLEQFKDPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLM 1387 G GG+ + S K+++P GRP+GSK++ ++G + IA+SRPRR T +RW D ++PGEQ R RP P NP + I +APTF+PT EQF+DP+ YIESIRP E +GIAKIVPP GW+PP T + H+ K +PTKKQALH+LM Sbjct: 260 GGGGKWSGASQQPSLKRNKPTNGARQRGRPMGSKSRSSDEDPPFVAANPPQRGSSGEDDSATIATSRPRRHTEPRKRWADQMMNPGEQWARKIPKALRPLPT---NPVEASIPDAPTFYPTEEQFRDPLTYIESIRPTAESFGIAKIVPPVGWDPPPTPLRPHSRKLVPTKKQALHSLM 435
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: K0S4Z0_THAOC (JmjN domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4Z0_THAOC) HSP 1 Score: 71.6 bits (174), Expect = 4.730e-10 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 1181 DIREAPTFWPTLEQF-KDPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLMKIR 1396 DI P F P++E+F +DP++YIE+IRP+ E YGI KIVPP GW+PP V + K TK Q++H L ++R Sbjct: 53 DIPFGPVFHPSVEEFSQDPLKYIEAIRPLAEKYGICKIVPPAGWDPPFALDV-DSDKTFSTKDQSIHRLQEVR 124
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A7S1YPV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YPV2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.050e-10 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 1169 PADG--DIREAPTFWPTLEQFK-DPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLMK 1390 PADG + + PTF+PT+E+F +PV YI IRPI E YGI KIVPP GW+PP V + K TK+Q +H L + Sbjct: 48 PADGWLSVPDGPTFFPTVEEFDGNPVHYINKIRPIAEKYGICKIVPPAGWDPPFC-VNMDSPKKFQTKEQLIHRLQE 123
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A7C8IEQ5_9PLEO (PLU-1-like protein-domain-containing protein n=1 Tax=Massariosphaeria phaeospora TaxID=100035 RepID=A0A7C8IEQ5_9PLEO) HSP 1 Score: 73.2 bits (178), Expect = 7.210e-10 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 1184 IREAPTFWPTLEQFKDPVRYIESIRPIVEGYGIAKIVPPDGWNPP 1318 ++EAPTF PT E+FKDPV+YI+SIR + YGIAKIVPPD WNPP Sbjct: 94 LQEAPTFRPTAEEFKDPVQYIQSIREEAQKYGIAKIVPPDSWNPP 138
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A7S2P470_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P470_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.050e-9 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 1169 PADGDIREAPTFWPTLEQFK-DPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLMK 1390 P D+ PTF+PT+E+F +P+ YI+ IRPI E YGI KIVPP GWNPP V + K TK Q LH L + Sbjct: 43 PQGVDVPVGPTFFPTVEEFTLNPLVYIDKIRPIAEKYGICKIVPPPGWNPPLC-VDMKSGKQFETKNQKLHRLQE 116
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: B7G887_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G887_PHATC) HSP 1 Score: 72.0 bits (175), Expect = 1.180e-9 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 1181 DIREAPTFWPTLEQFK-DPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLMK 1390 ++ APTF+PT++ F+ + + ++E IRP+ E YGI KIVPPDGWNPP V + K TK+Q LH L + Sbjct: 49 EVPWAPTFYPTVQDFEGNMIHFVEKIRPVAERYGICKIVPPDGWNPP-CQVDRNTRKKFQTKRQLLHRLQE 118
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A6A5KEL2_9PLEO (PLU-1-domain-containing protein n=1 Tax=Decorospora gaudefroyi TaxID=184978 RepID=A0A6A5KEL2_9PLEO) HSP 1 Score: 72.4 bits (176), Expect = 1.260e-9 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 1184 IREAPTFWPTLEQFKDPVRYIESIRPIVEGYGIAKIVPPDGWNPP 1318 +REAPT+ PT EQFKDPV+YI+SIR + YGI K+VPPD WNPP Sbjct: 94 LREAPTYRPTAEQFKDPVQYIQSIREEAQKYGIVKLVPPDSWNPP 138
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A7C9ATL7_OPUST (JmjN domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ATL7_OPUST) HSP 1 Score: 68.6 bits (166), Expect = 1.870e-9 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 1181 DIREAPTFWPTLEQFKDPVRYIESIRPIVEGYGIAKIVPPDGWNPP 1318 D+ E P F+P+ E+FKD +RYIE IRP EGYGI +IVPP W PP Sbjct: 137 DLEEVPVFYPSEEEFKDTIRYIEQIRPKAEGYGICRIVPPPSWKPP 182
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A7R9WKL4_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKL4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.090e-9 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 1184 IREAPTFWPTLEQFK-DPVRYIESIRPIVEGYGIAKIVPPDGWNPPQTNVVYHAHKPIPTKKQALHNLMK 1390 + PTF+PT+E F+ +P+ YIE IRPI E +GI KIVPP GWNPP +V + K TK+Q +H L + Sbjct: 49 VASGPTFYPTVEDFEGNPLHYIEKIRPIAEKFGICKIVPPKGWNPP-FSVDMNQTKKFQTKEQLIHRLQE 117
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Match: A0A6A6X061_9PLEO (PLU-1-domain-containing protein n=1 Tax=Melanomma pulvis-pyrius CBS 109.77 TaxID=1314802 RepID=A0A6A6X061_9PLEO) HSP 1 Score: 71.6 bits (174), Expect = 2.190e-9 Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 1184 IREAPTFWPTLEQFKDPVRYIESIRPIVEGYGIAKIVPPDGWNPP 1318 ++EAPTF PT E+FKDPV+YI+SIR + +GIAKIVPPD WNPP Sbjct: 92 LQEAPTFRPTAEEFKDPVQYIQSIREEAQQFGIAKIVPPDSWNPP 136 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10250.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10250.1.2 >prot_D-mesarthrocarpus_Contig10250.1.2 ID=prot_D-mesarthrocarpus_Contig10250.1.2|Name=mRNA_D-mesarthrocarpus_Contig10250.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=250bp MAGSEAHSPEGASIQAQPPTTEAVSAPVLGALSNHSTAEAQPQDPALPNNback to top mRNA from alignment at D-mesarthrocarpus_Contig10250:33..3976+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10250.1.2 ID=mRNA_D-mesarthrocarpus_Contig10250.1.2|Name=mRNA_D-mesarthrocarpus_Contig10250.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3944bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10250:33..3976+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10250:33..3976+ >mRNA_D-mesarthrocarpus_Contig10250.1.2 ID=mRNA_D-mesarthrocarpus_Contig10250.1.2|Name=mRNA_D-mesarthrocarpus_Contig10250.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10250:33..3976+ (Discosporangium mesarthrocarpum MT17_79)back to top |