mRNA_D-mesarthrocarpus_Contig1025.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: D7FV92_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV92_ECTSI) HSP 1 Score: 256 bits (654), Expect = 5.720e-74 Identity = 122/218 (55.96%), Postives = 156/218 (71.56%), Query Frame = 3 Query: 15 VGSIRAPDLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAKELAMRLDYNGHYS 668 VGS + ++AM +W+G+ + YRLEWP+HL+L RE M YNRLF LA KR ELERVWP LMQ+ YR L ++ WLGP+W LRA MAFFV+NL FYLQVDVVE Y+LL+ + DF ++RAH FL+TLRAKF++DN AI + + R LR VL FCCLF+LH DA D+ EV AL AF++E+ + P LE++AKEL MRLD+NGH+S Sbjct: 844 VGSGPRVEEMLEAMDSWSGLCLHYRLEWPMHLVLTRETMQTYNRLFRLLACVKRASLELERVWPTLMQSRYRGLANEESAWLGPLWMLRARMAFFVSNLAFYLQVDVVEAAYTLLRSKLVTVRDFVSLQRAHQEFLATLRAKFYVDNLAIAQGLGRALRHVLRFCCLFSLHGDAKDILHSEVIALHDAFQDEMKLLVPVLEKVAKELMMRLDFNGHFS 1061
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A7S2W3Z6_9STRA (Spindle pole body component n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3Z6_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.050e-45 Identity = 89/216 (41.20%), Postives = 129/216 (59.72%), Query Frame = 3 Query: 21 SIRAPDLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERL-AKELAMRLDYNGHY 665 S +A + +DA W + ++Y ++WPLHLI +E + YN++F L TKR ELE +WP LM+ YR L D WL P+ ++ + M FFV NL YLQVDVVE ++S L ++ E+F+ VRRAHN +L+ L+ K + + E ++R+LR F LF SDA ++P EV+A F E ++ LER AKELA RL+Y+G + Sbjct: 414 STQAMERLLDAQATWDDLHLEYTVDWPLHLIFTQEALAAYNKVFSLLWATKRTMLELELLWPQLMETRYRVLTGPDLIWLRPLHTIHSEMLFFVKNLLVYLQVDVVEAQFSKLVSSLQLQEEFDAVRRAHNTYLAALQKKSHIAVRPLMEGIQRVLRSCRHFAALFANFSDAAEIPHSEVEAAVEQFRTEATGLYMLLERTDAKELAARLNYSGWF 629
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: UPI0009E35A9C (LOW QUALITY PROTEIN: gamma-tubulin complex component 4-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E35A9C) HSP 1 Score: 130 bits (327), Expect = 5.510e-30 Identity = 73/230 (31.74%), Postives = 119/230 (51.74%), Query Frame = 3 Query: 63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGE---VQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSNH*QDKKSDVSVVSLLG 719 W V +QY ++WPLH++ + + YN LF FL KR +L+RVW A M + L T + + +W R +MAF V NL +YLQVDV+E +YS L +++ DFE +R AH+HF++T+ A+ FL + + +L L F L L + + L E ++ + +E + + +F L + +L +R+D+N H+S+ + VS G Sbjct: 445 WDCVKLQYDVQWPLHILFHPAVLEKYNNLFRFLLKVKRTQLDLQRVWAAYMGT--KHLSTAQLSNMTKIWLARMHMAFLVDNLQYYLQVDVLEAQYSQLVEKINSTRDFESIRLAHDHFITTMMAQSFLLMKPVSHCLDEILNLCQSFSSLL-LQTGSAGLTHRELTQIENITKTYERQTILLFQILSSVRSHQASPHLAQLLLRIDFNKHFSSSSSSLSTTVSSSEASG 671
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A2B4SWB2_STYPI (Gamma-tubulin complex component n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SWB2_STYPI) HSP 1 Score: 128 bits (321), Expect = 2.440e-29 Identity = 74/223 (33.18%), Postives = 117/223 (52.47%), Query Frame = 3 Query: 36 DLAVDAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKT---AFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671 D A + W V +QY ++WPLH++ + YN+LF FL KR +L++VW A M + L T + + +W R +MAF V NL +YLQVDV+EV+YS L + + DFE +R AH++FL+TL A+ FL + + +L L F L L + + L K E+ + +E + + F L + +L +R+D+N H+S+ Sbjct: 324 DQAGVVISGWDCVKLQYDVQWPLHILFQPTVLENYNKLFRFLLKVKRTQLDLQQVWAAYMGT--KHLSTAQLSNMTKIWLSRMHMAFLVDNLQYYLQVDVLEVQYSQLVEKIKSTRDFESIRLAHDNFLTTLMAQSFLLMKPVSHCLEEILNLCQSFSSLL-LQTGSSGLAKRELSQIDNITKTYERQTVLFFQILSSVRSHQASPHLAQLLLRIDFNKHFSS 543
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3P4NF32_GULGU (Gamma-tubulin complex component n=2 Tax=Mustelidae TaxID=9655 RepID=A0A3P4NF32_GULGU) HSP 1 Score: 122 bits (305), Expect = 7.750e-29 Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = 3 Query: 63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQA--LKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668 W + + Y+++WPLH++ + YN +F +L +RV EL+ W MQ R + N W LR +MAF V NL +YLQVDV+E ++S L +++ DFE +R AH+HFLS L A+ F+ + + +L L GFC L + + +D +G Q L F + +F L + +L +RLDYN +Y+ Sbjct: 71 WAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQ----RKHLKSNQTDAVKWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHGFCSLVSQNLGPLD-ERGAAQLGILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 277
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3M6TVE7_POCDA (Gamma-tubulin complex component n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TVE7_POCDA) HSP 1 Score: 126 bits (317), Expect = 1.150e-28 Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 3 Query: 63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKT---AFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671 W V +QY ++WPLH++ + YN+LF FL KR +L++VW A M + L T + + +W R +MAF V NL +YLQVDV+E +YS L +++ DFE +R AH++FL+TL A+ FL + + +L L F L L + + L K E+ + +E + + +F L + +L +R+D+N H+S+ Sbjct: 432 WDCVKLQYDVQWPLHILFQPAVLENYNKLFRFLLKVKRTQLDLQQVWAAYMGT--KHLSTAQLSNMTKIWLSRMHMAFLVDNLQYYLQVDVLEAQYSQLVEKINSTRDFESIRLAHDNFLTTLMAQSFLLMKPVSHCLDEILNLCQSFSALL-LQTGSSGLAKRELSQIDNITKTYERQTVLLFQILSSVRSHQASPHLAQLLLRIDFNKHFSS 642
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A3B4A9G3_9GOBI (Gamma-tubulin complex component n=8 Tax=Gobiidae TaxID=8220 RepID=A0A3B4A9G3_9GOBI) HSP 1 Score: 125 bits (314), Expect = 2.620e-28 Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3 Query: 63 WTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668 W + + YR++WPLH++ + YN +F +L +RV +L+ +W MQ + + D P W LR +MAF + NL +YLQVDV+E ++S L +++ DFE +R AH+HF+S L A+ F+ + + +L L FC L +S + ++ L F + +F L + +L +RLDYN +Y+ Sbjct: 404 WAALGLSYRVQWPLHILFTPAVLEKYNVVFRYLLSVRRVQSQLQHLWALQMQRKHLKSSQTD----APQWRLRNHMAFLIDNLQYYLQVDVLESQFSQLLTQINSTRDFESIRLAHDHFISNLLAQSFILLKPVFHCLSEILELCHSFCSLVGQNSALDERGAAQLDLLIKGFRRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 609
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: A0A1S3HV12_LINUN (Gamma-tubulin complex component n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HV12_LINUN) HSP 1 Score: 125 bits (313), Expect = 4.100e-28 Identity = 66/216 (30.56%), Postives = 114/216 (52.78%), Query Frame = 3 Query: 48 DAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFN-LHSDAVDLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYS 668 A W + ++Y +EWPLHL+ C+ YN+LF FL KRV +L+ W L N +++ +N MW+LR +M+F V NL +YLQVDV+E ++S+L + DFE +R AH+ F+++L ++ FL + + +L FC L + H+ + +++ + F+ + +F L + +L +R+DYN ++S Sbjct: 435 SAEPGWNVLGLEYSVEWPLHLLTTESCLEKYNQLFSFLLLVKRVELDLQHCW-MLHMNHFKQQEMLENE--RQMWNLRMHMSFLVDNLQYYLQVDVIESQFSILLEKIHTTRDFEAIRLAHDQFITSLLSQSFLLMKGVSRCLHEILNGCHAFCVLVSHSHTGMDERQTAKLEEIAKNFQRQSKLLFSILSSVKNHQGSPHLAQLLLRMDYNKYFS 647
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: D8QRE9_SELML (Gamma-tubulin complex component n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRE9_SELML) HSP 1 Score: 125 bits (313), Expect = 4.550e-28 Identity = 72/232 (31.03%), Postives = 120/232 (51.72%), Query Frame = 3 Query: 36 DLAVDAMV-AWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLG--------PMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAVDLPKG-EVQALKTAFEEEILFIFPTLE--RLA--------KELAMRLDYNGHYSN 671 D+AV W G+ ++Y ++WPL L+ NRE + Y+++F +L KR+ ELE+ W MQ R R P W LR +MA+ +TNL FY+QVDV+E +++LLQ V A++DF + R H +LS L ++ FLD ++ + +++L L C + H DA E+ + F ++ ++ L +LA ++ +RL+YN + + Sbjct: 470 DIAVGPSYDGWDGIALEYSIDWPLQLLFNREVLAKYSKVFQYLLRLKRIQLELEKSWAKAMQRDRRESRGRQKNHKKDDPKVSGMPTWRLRQHMAYLITNLQFYIQVDVIESQWNLLQERVQASKDFTELARFHQEYLSALISQSFLDIGSVSRILDSIIKLCLQLCRIME-HQDATSSSTAAELDQITEEFNKKSNSLYTILRSSKLAGSQRAPFLRQFLLRLNYNSFFES 700
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Match: B3RSJ9_TRIAD (Gamma-tubulin complex component n=2 Tax=Trichoplax TaxID=10227 RepID=B3RSJ9_TRIAD) HSP 1 Score: 124 bits (311), Expect = 7.020e-28 Identity = 70/217 (32.26%), Postives = 111/217 (51.15%), Query Frame = 3 Query: 48 DAMVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWPALMQNCYRRLPTRDNTWLGPMWSLRANMAFFVTNLTFYLQVDVVEVEYSLLQRTVSAAEDFEGVRRAHNHFLSTLRAKFFLDNFAIKESMRRLLRLVLGFCCLFNLHSDAV-DLPKGEVQALKTAFEEEILFIFPTLERLAK--------ELAMRLDYNGHYSN 671 +A WT + +QY ++WPL LIL + + YN LF FL R+ EL+ W MQ +R ++ T +W+LR +MAF V NL +YLQVDV+E ++++L + + +DFE VR AH+ F+S L + F + + +L L FC N SD V + E + FE + + L + +L +R+D+N +S+ Sbjct: 428 EAECGWTCLNLQYNVQWPLQLILTKPILEKYNVLFRFLISVNRIQLELQHCWKLQMQ---KRQEWQEQTQFRNIWNLRNHMAFLVDNLQYYLQVDVLEGQFTILMDKIKSTKDFEHVRIAHDQFISALVGQSFRLLKPVSHCLDEILNLCQRFCAFVNRQSDEVLESSAEEFDEISKCFERQTSLLLKILSSVRSHQASPHLSQLLLRIDFNKFFSS 641 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1025.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1025.7.1 >prot_D-mesarthrocarpus_Contig1025.7.1 ID=prot_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=208bp MVAWTGVFIQYRLEWPLHLILNRECMGVYNRLFGFLAHTKRVGFELERVWback to top mRNA from alignment at D-mesarthrocarpus_Contig1025:19560..24345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1025.7.1 ID=mRNA_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4786bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1025:19560..24345- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1025:19560..24345- >mRNA_D-mesarthrocarpus_Contig1025.7.1 ID=mRNA_D-mesarthrocarpus_Contig1025.7.1|Name=mRNA_D-mesarthrocarpus_Contig1025.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=624bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1025:19560..24345- (Discosporangium mesarthrocarpum MT17_79)back to top |