mRNA_D-mesarthrocarpus_Contig10241.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2D8PQS2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQS2_9PROT) HSP 1 Score: 274 bits (701), Expect = 6.390e-90 Identity = 139/174 (79.89%), Postives = 156/174 (89.66%), Query Frame = 1 Query: 40 WTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 W RLP NLRGI+WLSLGAFLF+VVDVFVKSLGGRF P++ISFFRY CG +FLIP+FI+ G N+ T R PLH+LRM LAF AQLGIFITVIHMPLADATAFMFSKPLFTT+VAVF+L EVVSGRRWAATIVGF+GVLVLVRPGAG IDP+A VA+ SA+TFA+ANVLIR +STT Sbjct: 23 WLRLPPNLRGILWLSLGAFLFAVVDVFVKSLGGRFDPLQISFFRYGCGLIFLIPVFIRFGASNMKTERLPLHILRMCLAFAAQLGIFITVIHMPLADATAFMFSKPLFTTLVAVFILHEVVSGRRWAATIVGFVGVLVLVRPGAGTIDPYAFVAIFSALTFAIANVLIRKMSTT 196
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A3D2BVM1_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BVM1_9PROT) HSP 1 Score: 265 bits (678), Expect = 1.580e-86 Identity = 139/175 (79.43%), Postives = 154/175 (88.00%), Query Frame = 1 Query: 37 FWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 FW RLP N RGIIWLS+GAFLF+VVDVFVKSLGGRF P++ISFFRY CG +FL+P+FI LG N+ T R PLHLLRM LAF AQLGIFITVI+MPLA+ATAFMFSKPLFTTVVAVFVL EVV+ +RW+ATIVGFIGVLVLVRPGA A DP ALVAVASA+TFA+ANVLIR LS T Sbjct: 15 FWLRLPPNFRGIIWLSMGAFLFAVVDVFVKSLGGRFDPLQISFFRYGCGLIFLVPVFIGLGAANMKTERLPLHLLRMFLAFAAQLGIFITVIYMPLAEATAFMFSKPLFTTVVAVFVLHEVVTRQRWSATIVGFIGVLVLVRPGADAFDPLALVAVASALTFAIANVLIRKLSKT 189
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2S6Q740_9PROT (Riboflavin transporter n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q740_9PROT) HSP 1 Score: 258 bits (658), Expect = 1.450e-83 Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 1 Query: 19 VTNLIGFWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 + +L W RLP NLRGI+WLS+G F+F++VDVFVKSLGGRF P++ISFFRY+CG +FL+PLFI+LG NL T R PLHL+RM LAF AQLGIFITVIHMPLA+ATA MFSKPLFTT++AV +L EVV RRW ATI+GF+GVLVLVRPGA A DP ALVAV SA+TFAVANVLIR +STT Sbjct: 6 ILSLYSTWLRLPPNLRGILWLSIGTFMFAIVDVFVKSLGGRFDPLQISFFRYSCGLIFLMPLFIRLGASNLRTGRLPLHLMRMCLAFAAQLGIFITVIHMPLAEATALMFSKPLFTTLIAVILLHEVVGRRRWVATILGFMGVLVLVRPGAEAFDPIALVAVTSALTFAVANVLIRKMSTT 186
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2D8G233_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G233_9PROT) HSP 1 Score: 246 bits (629), Expect = 4.230e-79 Identity = 124/177 (70.06%), Postives = 150/177 (84.75%), Query Frame = 1 Query: 31 IGFWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 + W RLP N RGI+WLS+G FLF+VVDVFVKSLGGRF P++I+ FRY CG +FLIP+F++ G N+ T R PLHLLRM LAF AQLGIF+T+I+MPLA+ATAFMFSKPLFTTVVA+F+L EVV+ +RWAAT +GFIGVLVL RPGA A +P A+VA+ SA+TFA+ANVLIR LSTT Sbjct: 13 LNIWLRLPPNFRGILWLSMGTFLFAVVDVFVKSLGGRFDPLQIAXFRYGCGLIFLIPIFLRXGITNMKTDRLPLHLLRMFLAFAAQLGIFVTIIYMPLAEATAFMFSKPLFTTVVAIFLLHEVVTRQRWAATFIGFIGVLVLSRPGAEAFNPLAIVAILSALTFAIANVLIRRLSTT 189
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2E7QWC6_9PROT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7QWC6_9PROT) HSP 1 Score: 233 bits (595), Expect = 6.160e-74 Identity = 117/187 (62.57%), Postives = 146/187 (78.07%), Query Frame = 1 Query: 1 MTSSASVTNLIGFWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 MTS ++ L G W R+PGN+RGI+WLS+GAFLFS+ DV VK LG +F P E++ FRY G + L P+FIK+G L T+R +H+LRM LA IAQLGIF+TVI+MPLADATA FSKPLFTTVVAV ++ E+V+GRRW ATIVGFIGV++++RPGA I+P AL+ V SA+ FA ANVLIR LS T Sbjct: 1 MTSPPILSRLTGAWLRMPGNIRGILWLSIGAFLFSITDVIVKQLGRKFDPTELALFRYGIGMIILAPIFIKMGLAELKTKRIGMHILRMSLAMIAQLGIFVTVINMPLADATAIFFSKPLFTTVVAVILIGEIVNGRRWIATIVGFIGVVIMIRPGAETINPIALIGVGSALAFATANVLIRVLSKT 187
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2E5V750_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V750_9PROT) HSP 1 Score: 226 bits (577), Expect = 3.360e-71 Identity = 114/174 (65.52%), Postives = 140/174 (80.46%), Query Frame = 1 Query: 40 WTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 W ++PGN+RGI+WLS+GAFLFSV DV VK LG +F P E++ FRY G + L P+FIK+G L T+R LH++RM LA AQLGIFITVI+MPLADATA FSKPLFTTVVAV +SEVVSGRRW ATIVGF+GV+++++PGA I+P AL+AVASA+ FA ANVLIR L+ T Sbjct: 14 WLKMPGNIRGIVWLSIGAFLFSVTDVIVKQLGKKFDPTELALFRYGIGMIILAPVFIKMGVAELKTQRIGLHIVRMSLAMAAQLGIFITVINMPLADATAIYFSKPLFTTVVAVIFISEVVSGRRWMATIVGFVGVIIMIQPGANTINPIALIAVASALAFATANVLIRVLART 187
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2E6GSS6_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GSS6_9PROT) HSP 1 Score: 221 bits (563), Expect = 1.900e-68 Identity = 108/186 (58.06%), Postives = 142/186 (76.34%), Query Frame = 1 Query: 4 TSSASVTNLIGFWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 T + + L G W RLPGN+RGIIWLS+G+ LFS DV VK LG +F P++++ FRY G + L+P+F+++G L T R LH++RM LA +AQ+GIF+TVIH+PLADATA FSKP+FTTV+AV +SEVVSGRRW ATI+GF GV++++RPGA +I+P AL+ V SA FA ANVLIR L+ T Sbjct: 53 TRTTKTSRLTGAWLRLPGNIRGIIWLSIGSILFSATDVVVKFLGQKFDPLQLALFRYGIGMIILMPVFLRMGVEELKTDRIGLHIIRMSLAMVAQVGIFVTVIHLPLADATALFFSKPIFTTVIAVVAISEVVSGRRWTATIIGFFGVVIMLRPGADSINPIALIGVGSAFAFAAANVLIRVLART 238
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2D8G2J1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G2J1_9PROT) HSP 1 Score: 196 bits (498), Expect = 2.100e-59 Identity = 96/175 (54.86%), Postives = 133/175 (76.00%), Query Frame = 1 Query: 37 FWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 +W RLPGNLRGI+WL +G F+V D+FVKSLG P +++FFRY GF+ ++P F+K+G L T R +H+ R+ LA IAQ+G++ +V+++PLADATA FS+ LFTTV+AV L E+VSGRRW AT+ GF+GV+++VRPG G IDP +A+ +A TFA+ANVLIR +S+T Sbjct: 7 YWARLPGNLRGILWLLMGTLAFAVNDLFVKSLGQTISPFQMAFFRYGIGFMLMLPFFLKMGVSGLKTNRPGIHIARLILACIAQVGVYTSVVYLPLADATALAFSRILFTTVIAVIFLREIVSGRRWTATVAGFVGVVIMVRPG-GQIDPVVFIAIGAACTFAIANVLIRIMSST 180
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A520NXA8_9PROT (DMT family transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NXA8_9PROT) HSP 1 Score: 196 bits (498), Expect = 2.880e-59 Identity = 98/174 (56.32%), Postives = 133/174 (76.44%), Query Frame = 1 Query: 40 WTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 W RLP NLRGI+WL +G F+V D+FVKSLG P +++FFRY GF ++P F+++G G L T R +H++R+ LA +AQ+G++ +V+++PLADATA FS+ LFTTV+AV L E+VSGRRW+ATI GF+GVLV+VRPG G IDP +A+ +A TFA+ANVLIR +STT Sbjct: 16 WIRLPPNLRGILWLLMGTLAFAVNDLFVKSLGQAMSPFQMAFFRYGIGFALMLPFFLRMGVGELKTSRPGIHIVRLILACVAQVGVYTSVVYLPLADATALAFSRILFTTVIAVIFLREIVSGRRWSATIAGFVGVLVMVRPG-GEIDPVVFIAIGAACTFAIANVLIRIMSTT 188
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Match: A0A2E6GSB2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GSB2_9PROT) HSP 1 Score: 196 bits (497), Expect = 3.960e-59 Identity = 97/174 (55.75%), Postives = 132/174 (75.86%), Query Frame = 1 Query: 40 WTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPIEISFFRYACGFVFLIPLFIKLGPGNLTTRRFPLHLLRMGLAFIAQLGIFITVIHMPLADATAFMFSKPLFTTVVAVFVLSEVVSGRRWAATIVGFIGVLVLVRPGAGAIDPFALVAVASAMTFAVANVLIRTLSTT 561 W LPGNLRGI+WL+LG F++ DV VK LG +F P+E++F RY+ G + L P+F ++G L T R +H+ R+ +A IAQ+G+F +VIH+ LADATA FS+PLFTT+VAV +LSE+VS RRW AT VGF+GVL++VRPG DP AL+AV SA TFA+AN++IR +++T Sbjct: 15 WIELPGNLRGILWLTLGTIAFALNDVLVKLLGKKFGPMELAFCRYSIGLLILSPIFFRMGASGLKTTRLGIHMTRLVIACIAQVGVFYSVIHLYLADATAIAFSRPLFTTIVAVILLSELVSARRWVATAVGFVGVLIMVRPGHAGFDPVALIAVISACTFAIANIMIRMMAST 188 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10241.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10241.6.1 >prot_D-mesarthrocarpus_Contig10241.6.1 ID=prot_D-mesarthrocarpus_Contig10241.6.1|Name=mRNA_D-mesarthrocarpus_Contig10241.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=187bp MTSSASVTNLIGFWTRLPGNLRGIIWLSLGAFLFSVVDVFVKSLGGRFHPback to top mRNA from alignment at D-mesarthrocarpus_Contig10241:3876..4436+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10241.6.1 ID=mRNA_D-mesarthrocarpus_Contig10241.6.1|Name=mRNA_D-mesarthrocarpus_Contig10241.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=561bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:3876..4436+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10241:3876..4436+ >mRNA_D-mesarthrocarpus_Contig10241.6.1 ID=mRNA_D-mesarthrocarpus_Contig10241.6.1|Name=mRNA_D-mesarthrocarpus_Contig10241.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=561bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:3876..4436+ (Discosporangium mesarthrocarpum MT17_79)back to top |