mRNA_D-mesarthrocarpus_Contig10241.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1Z9JEE6_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9JEE6_9PROT) HSP 1 Score: 324 bits (830), Expect = 1.120e-108 Identity = 164/266 (61.65%), Postives = 205/266 (77.07%), Query Frame = 1 Query: 1 MSSVSAATPGPSLWARLI-GSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRD 795 M++V+ A P W R++ G+TL K+ G +IL +W++GV+ FA FVA+P VA VFPTV++D A+ A+ STL AVV GL IA++ GT++G+ MGRVK DRML+FYVNG Y MPM+A LPL+T+WFGY ++ARLATV+FA FS++IN DGARSVPREYLEV AYRA R VWFDIT+ S+LPYLIAG RLAAGRALVGAV+AE F S+DG GMY+LANAR NEAVVGVL L FGL F+ MN +R++FPWYRR+ Sbjct: 1 MNTVTVAASQPLAWKRILFGTTLRTKITTGAIILLIWQVGVQAFAPAFVAKPLNVALVFPTVLMDTAFLLASLSTLTAVVQGLIIALIAGTIVGVAMGRVKLFDRMLNFYVNGLYTMPMVALLPLITIWFGYEDDARLATVIFAGFFSIVINARDGARSVPREYLEVCKAYRAPMRYVWFDITVFSSLPYLIAGFRLAAGRALVGAVIAEFFVSLDGVGMYVLANARTFKHNEAVVGVLALVLFGLLFELTMNWTMRRFFPWYRRE 266
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A848W379_9PROT (ABC transporter permease subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W379_9PROT) HSP 1 Score: 313 bits (801), Expect = 5.390e-104 Identity = 153/254 (60.24%), Postives = 194/254 (76.38%), Query Frame = 1 Query: 37 LWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDG 798 LW + + IK+ G +IL +W+IGV FAA FVA+P +A+VFP+V+ DP + A W+TL AV GLA+A+V GT++G+ MGR+K DR L+FYVNG Y MPMIA LPLLT+WFGYS +AR+AT++FAA FS++INV DGARSVP EYL+V YRA R VWFDITL S+LPYLIAG RLAAGRALV AV+AE F S++G GM++L+NAR NEAVVGV+ L FGL F+ MN + R++FPWYRR+G Sbjct: 33 LWGTPARAKITIKVATGFLILFVWQIGVALFAANFVAKPINIAKVFPSVLADPLFQQAAWNTLAAVFQGLAVALVAGTVVGIAMGRMKVFDRALNFYVNGLYTMPMIALLPLLTIWFGYSGDARMATIIFAAFFSIVINVRDGARSVPPEYLDVCKTYRAPARFVWFDITLFSSLPYLIAGFRLAAGRALVAAVIAEFFVSLNGVGMFVLSNARSFKHNEAVVGVVALVLFGLLFELTMNWITRRYFPWYRREG 286
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A0S8C916_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C916_9PROT) HSP 1 Score: 302 bits (774), Expect = 3.450e-100 Identity = 153/252 (60.71%), Postives = 190/252 (75.40%), Query Frame = 1 Query: 37 LWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRR 792 LW + S + +KL+ G++IL W++GV FA FVA+P +A FP VI D + A STLGAV+ GL IA+V G ++G+ MGRVK DRML+FYVNG YAMPM+A LPLL +WFGY +ARLAT+VFAA FS+ +N DGARSVP EYLEV AYRA RR +WFDITL S+LPYL+AG+RLA+GRALVGAV+AE F S++G GMYILA+AR NEAV+GVL LAAFGL + MN V+R++ PW RR Sbjct: 17 LWNAIPWSDVRVKLIAGLIILVAWQVGVAAFAPRFVAKPLGIAAAFPAVITDADFLAAVVSTLGAVLKGLLIAVVGGVIVGISMGRVKFFDRMLNFYVNGLYAMPMVAVLPLLAIWFGYESDARLATIVFAAFFSIAMNARDGARSVPPEYLEVCKAYRAKRRYIWFDITLYSSLPYLVAGLRLASGRALVGAVIAEFFVSLEGVGMYILAHARSFQHNEAVIGVLALAAFGLFVEGAMNWVMRRFLPWARR 268
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A346A004_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A004_9HYPH) HSP 1 Score: 283 bits (723), Expect = 2.460e-92 Identity = 150/272 (55.15%), Postives = 197/272 (72.43%), Query Frame = 1 Query: 1 MSSVSAATPGPSLWARL---IGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDGGKG 807 +++V+ + P P+ R +L +LV G +IL LWE VR +A +VA+PS VA V P VIVDPA+ AT TL AV GLA+A+V GT+IGLLMGR A +R + YVNGFYA+PMI LPL ++WFGYS R+A ++FAA+FS+IINV+DGAR+VPREYLEV+ ++R++R +V F I L S++PYL+AG+RLAAGRAL+GAV+AE F S G G YIL N+R NEA VGVL+L AFG+GF+ L+ V R++ PWYRRD G Sbjct: 6 LTAVATSAPAPATAERKRSRFSDLVLPRLVVGAIILLLWEGVVRLWAPAYVAKPSTVALVIPKVIVDPAFLTATGITLSAVAQGLAVALVLGTIIGLLMGRSPALERAIRHYVNGFYAIPMIVVLPLFSLWFGYSGATRIAIIIFAAIFSIIINVADGARAVPREYLEVSRSFRSNRVNVLFGIVLPSSMPYLLAGIRLAAGRALIGAVVAEFFISAGGLGYYILYNSRTYHHNEAFVGVLLLGAFGVGFEVLVGWVTRRFLPWYRRDEKAG 277
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534W4V9_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W4V9_9DELT) HSP 1 Score: 272 bits (696), Expect = 3.480e-88 Identity = 148/260 (56.92%), Postives = 179/260 (68.85%), Query Frame = 1 Query: 10 VSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789 V A+P S+ ARL ST L+K+ G+++LG WEI VR FA +VARPS VA P + A TL AVV GL IA++ GTLIGL MGR++ DR+L YVNG YAMPM+A LPLLT+WFGYS ARLATVVFAA F + +N SDGARSVP EYLEVA A RA VWF ITL S+LPYL+AG+RLA GRALVGAV+AE F S+DG G +IL +R + A V VL+LA F +G DAL+ ++ WYR Sbjct: 16 VRDASPRRSVLARLSSSTPLVKIAGGVLVLGAWEIVVRLFAPAYVARPSSVARALPQALASAGMLRAAGVTLRAVVEGLLIAVLSGTLIGLAMGRIRVVDRLLKLYVNGLYAMPMVAILPLLTIWFGYSPAARLATVVFAAFFPIAMNASDGARSVPAEYLEVALACRARWTDVWFGITLPSSLPYLLAGLRLAIGRALVGAVVAEFFISIDGLGYFILFQSRTFHHDAAFVAVLLLAGFAVGMDALIGWFTKRHLRWYR 275
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4A3W2_9PROT (ABC transmembrane type-1 domain-containing protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4A3W2_9PROT) HSP 1 Score: 255 bits (651), Expect = 1.310e-81 Identity = 133/245 (54.29%), Postives = 176/245 (71.84%), Query Frame = 1 Query: 58 STLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRR 792 S L +K GIV+ LWEI VR A +VARPS +A+VF +V+ D + + +TL AVV GLAI++V GT +GL+MGRV + L +YVN +A PM+A LPL+T+WFGYS + RLA VVFA+ FS+ IN +DGARSVP E+LEVA ++RA S FD+ L S+LPYL+AG+RLAAGRALVGAV+AE F S+ G G YIL N+R NEA V V++L A G+GF+A + ++R++ PW RR Sbjct: 19 SPLALKAGAGIVLFALWEITVRALAPEYVARPSGIAKVFFSVLTDAGFLEVAAATLRAVVQGLAISVVAGTAVGLMMGRVSVVEHGLRYYVNSLFATPMVAILPLVTLWFGYSADTRLAVVVFASFFSLAINAADGARSVPPEFLEVARSFRARPLSTIFDVLLPSSLPYLLAGLRLAAGRALVGAVVAEFFVSIPGLGYYILYNSRAFKHNEAFVAVIVLVAAGVGFEASIKWLMRRYMPWSRR 263
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534PK91_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PK91_9DELT) HSP 1 Score: 254 bits (649), Expect = 1.900e-81 Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 1 Query: 64 LLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789 +L+K+ G+ IL LWE+ R FAA +VARPS + V P + A T TL V GL IA++ GT +GLLMG +K +R+L YVNG YAMPMIA LPLLT+WFGY+ + RLATVVFA+ F + +NV+DGARSVP EYLEVA + RA +WF +TL S+LPYL+AGVRLA GRALVGAV+AE F SVDG G Y+L +R N+A V VL+L AF L DAL+ + ++ W+R Sbjct: 7 VLVKIAGGLSILALWEMVARGFAAAYVARPSGILRVLPQTLGSEAVLRGTAITLWGVTQGLIIAVILGTAVGLLMGSLKLVERLLGLYVNGLYAMPMIAILPLLTIWFGYTSKTRLATVVFASFFPIAMNVADGARSVPAEYLEVARSCRARPHHLWFGVTLPSSLPYLLAGVRLAVGRALVGAVVAEFFVSVDGLGFYVLFQSRTFHHNQAFVAVLLLGAFALAIDALIAWLTGRYLRWHR 248
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4CPR2_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CPR2_9PROT) HSP 1 Score: 254 bits (648), Expect = 4.540e-81 Identity = 134/249 (53.82%), Postives = 172/249 (69.08%), Query Frame = 1 Query: 49 LIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRD 795 L+ S LL+K GIV+LG WE VR FA +VA+P +A VF V+ D + A +TL AVV GL IA+ G +GL MGR+ +R L +YVN +A PMIA LPL+T+WFGY+ +ARLA +VFAA FS+ +N DGARSVP +YLEVA ++RA S DI L S+LPYLIAG+RLAAGRALVGAV+AE F S+ G G YIL N+R NEA V V+ L G+ F+A++N + R++ PW RRD Sbjct: 22 LLASPLLLKTAAGIVLLGAWEAVVRAFAPAYVAKPIGIARVFLEVVSDGPFLAAAGATLWAVVKGLLIAITLGLAVGLAMGRLTVVERGLRYYVNSLFATPMIAILPLVTLWFGYNADARLAVIVFAAFFSIAVNTCDGARSVPLDYLEVARSFRARPLSTLLDIVLPSSLPYLIAGMRLAAGRALVGAVVAEFFISIPGLGYYILFNSRTFKHNEAFVAVIALVIVGVSFEAMLNWITRRYLPWARRD 270
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534YDW7_9DELT (ABC transporter permease n=3 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YDW7_9DELT) HSP 1 Score: 253 bits (647), Expect = 7.550e-81 Identity = 135/260 (51.92%), Postives = 173/260 (66.54%), Query Frame = 1 Query: 10 VSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789 ++A+ L RL S++ +KL G +LG WEI VR A +VA+PS + P V+ A TL AV GL IA+V G L+GL MG ++ A+R L YVNG YAMPM+A +PLLT+WFGY+ ARLAT++FA+ F + +NV+DGARSVP EYLEVA A RA +WF ITL S+LPYLIAG+RLA GRALVGAV+AE SVDG G YIL +R NEA+V VL+LA F + DA ++ ++R WYR Sbjct: 10 LTASASSRPLGRRLAESSVALKLAGGAFVLGAWEIVVRLLAPAYVAKPSGIFAALPGVVTSAPVLGAAGITLSAVAEGLVIAVVSGVLVGLFMGSLRLAERALSLYVNGLYAMPMVAIVPLLTIWFGYTSAARLATIIFASFFPIAMNVADGARSVPAEYLEVARACRARPHQIWFGITLPSSLPYLIAGIRLAVGRALVGAVVAEFIISVDGLGFYILFQSRTFHHNEALVAVLLLAGFAVVVDAAIDWIVRSRLRWYR 269
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4AD59_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AD59_9PROT) HSP 1 Score: 247 bits (630), Expect = 2.480e-78 Identity = 130/245 (53.06%), Postives = 170/245 (69.39%), Query Frame = 1 Query: 64 LLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDG 798 L ++L G+V+LG WEIGVR A +VARPSRV VF V+ D + A +TL AV+ GL ++ MGRV A +R L +YVN +A PM+A LPL+++WFGY +ARLATVVFAALFSV++N DGAR+VP +YLEVA ++RA D+ L ++LPYL+AGVRLAAGRALV AV+AE F S+ G G YIL N+R +EA V V++L A G+GFDAL+N + R++ PW RR G Sbjct: 27 LALQLAAGVVLLGAWEIGVRMLAPAYVARPSRVVVVFLRVLSDAQFLAAAAATLRAVLEGLLLSXXXXXXXXXAMGRVVAVERGLRYYVNSLFATPMVAILPLMSLWFGYDGDARLATVVFAALFSVVVNTCDGARAVPNDYLEVAHSFRARGWRTLLDVVLPASLPYLLAGVRLAAGRALVAAVVAEFFVSIPGLGYYILFNSRTFKHSEAFVAVIVLVAVGVGFDALINWITRRYLPWARRGG 271 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10241.5.1 >prot_D-mesarthrocarpus_Contig10241.5.1 ID=prot_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=270bp MSSVSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARback to top mRNA from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10241.5.1 ID=mRNA_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=810bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ >mRNA_D-mesarthrocarpus_Contig10241.5.1 ID=mRNA_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=810bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ (Discosporangium mesarthrocarpum MT17_79)back to top |