mRNA_D-mesarthrocarpus_Contig10241.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A1Z9JE92_9PROT (ABC transporter ATP-binding protein n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9JE92_9PROT) HSP 1 Score: 404 bits (1038), Expect = 1.340e-140 Identity = 196/253 (77.47%), Postives = 218/253 (86.17%), Query Frame = 1 Query: 10 RIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEI 768 RI ++ VGK YGDLQVFQDINL+F EREIVT+VGPSGCGKTTLLRCI GL+P+++G +RIDG VTEP GV++VFQHFGLFPWKTV+QNVGYGL++AG K+ I +KVPH+ LVGL GFE AYP+QLSGGMQQRCGLARAL EP VLLMDEPFAA+DAQTREILQ ELLRIW RP TMIFVTHSIEEAVLMGDRVVVLKGRPSSVFE+IDV LP PR R TL RFAE+REHVW LMDEAR AEFE+ Sbjct: 12 RISIEGVGKKYGDLQVFQDINLSFKEREIVTIVGPSGCGKTTLLRCIDGLMPVSEGEIRIDGDLVTEPREGVSVVFQHFGLFPWKTVRQNVGYGLKLAGASKSVIDQKVPHFTKLVGLEGFEDAYPYQLSGGMQQRCGLARALTMEPKVLLMDEPFAAVDAQTREILQFELLRIWGMRPMTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEIIDVDLPAPRDRSTLGHPRFAEIREHVWGTLMDEARAAEFEL 264
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A534VPY7_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534VPY7_9DELT) HSP 1 Score: 392 bits (1007), Expect = 9.360e-136 Identity = 188/257 (73.15%), Postives = 219/257 (85.21%), Query Frame = 1 Query: 1 AKARIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEIQ 771 A RI V K YG LQVF+D+NL G REI+ +VGPSGCGKTTLLRC+ GL+P+++G VR+DG VT PLP AMVFQHFGLFPWKTV NV YGL++AG KA I E+VP++I LVGLSGFE AYP+QLSGGMQQRCGLARALA EP VLLMDEPFAA+DAQTREILQ ELLRIW RPT+M+FVTHSI+EAVLMGDRVVVLKGRPS+V E+++V LPHPR+RETLAT RFAE+REHVW+ LMDEAR+AEF+++ Sbjct: 16 AAPRITVSGASKRYGGLQVFRDVNLRVGHREILALVGPSGCGKTTLLRCLDGLIPMSEGEVRVDGQPVTGPLPKAAMVFQHFGLFPWKTVFGNVAYGLRLAGASKAVIQERVPYFIQLVGLSGFEDAYPYQLSGGMQQRCGLARALAVEPDVLLMDEPFAAVDAQTREILQFELLRIWRMRPTSMVFVTHSIDEAVLMGDRVVVLKGRPSTVSEIVEVTLPHPRTRETLATTRFAELREHVWTTLMDEARRAEFQLE 272
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A534PKL1_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PKL1_9DELT) HSP 1 Score: 375 bits (962), Expect = 3.760e-129 Identity = 177/254 (69.69%), Postives = 214/254 (84.25%), Query Frame = 1 Query: 10 RIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEIQ 771 RI V GK YG+LQVF+ ++L+ G+REIV +VGPSGCGKTT LRC+ GL+P+++G + +DG + PLP AMVFQHFGL PWKTV+ NV YGL +AG KA I E+VPH+I LVGL+GFE AYP+QLSGGMQQRCGLARALA EP +LLMDEPFA++DAQTREILQ ELLRIW RPT+MIFVTHSIEEAVLMGDRV+VLKGRPS V E+++V LP PR+R TLA+ RFA++REHVW+ LMDEAR+AEFE++ Sbjct: 3 RIAVRGAGKRYGELQVFRGLDLSVGQREIVALVGPSGCGKTTFLRCLDGLIPMSEGEIVVDGKPINGPLPRTAMVFQHFGLLPWKTVRGNVAYGLDLAGASKAEIRERVPHFIQLVGLAGFEDAYPYQLSGGMQQRCGLARALAVEPDLLLMDEPFASVDAQTREILQFELLRIWRMRPTSMIFVTHSIEEAVLMGDRVIVLKGRPSGVAEIVEVDLPRPRTRATLASPRFAQLREHVWNILMDEARRAEFELE 256
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A6N7GQA7_9HYPH (ATP-binding cassette domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQA7_9HYPH) HSP 1 Score: 375 bits (962), Expect = 6.840e-129 Identity = 182/254 (71.65%), Postives = 212/254 (83.46%), Query Frame = 1 Query: 10 RIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEIQ 771 RI V + K +G L+VF+D+N GEREIVT+VGPSGCGKTTLLRCI GLLP+++G + ++TEP+ GVAMVFQHFGLFPWKTV NV YGL+MAGV A +AE+VP +I LVGL GFE AYP Q+SGGMQQRCGLARALA EPSVLLMDEPFAA+DAQTREILQ ELLRIWE+RPT+MIFVTHSIEEAVLMGDRV VLKGRPS++ +V+D+ LP PRSRETL RF E+RE VWS LM EAR+AEF ++ Sbjct: 20 RIRVRRLAKNFGALEVFRDVNFDLGEREIVTIVGPSGCGKTTLLRCIDGLLPVDEGEIWCGREQITEPIAGVAMVFQHFGLFPWKTVYDNVAYGLRMAGVSAAELAERVPQFIKLVGLGGFEHAYPWQMSGGMQQRCGLARALAIEPSVLLMDEPFAAVDAQTREILQFELLRIWETRPTSMIFVTHSIEEAVLMGDRVFVLKGRPSNIAKVVDIDLPRPRSRETLRAARFTELRELVWSTLMKEAREAEFHLE 273
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A1F4AD20_9PROT (ABC transporter ATP-binding protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AD20_9PROT) HSP 1 Score: 374 bits (960), Expect = 8.430e-129 Identity = 176/253 (69.57%), Postives = 214/253 (84.58%), Query Frame = 1 Query: 10 RIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEI 768 RIEV GK++G LQVF+D+NL GERE++ V+GPSGCGKTTLLRC+ GL+P+++G + ++G +T P GVAMVFQHFGLFPWKTVQQNV YGL++AG + I EKVP++INLVGL+GFE YP+Q+SGGMQQRCGLARALA P V+LMDEPF A+DAQTREILQ ELLRIWE+RPTTM+FVTH+I+EAVLMGDRV+VLKGRP+ V E++ V LP PRSR TL+ RFAE+REHVW LM +AR+AEFEI Sbjct: 6 RIEVRGAGKSFGSLQVFRDLNLDVGEREVLAVIGPSGCGKTTLLRCMNGLVPLSEGEILVEGARMTAPREGVAMVFQHFGLFPWKTVQQNVAYGLKLAGAAASEIGEKVPYFINLVGLTGFEGYYPYQVSGGMQQRCGLARALAVGPRVMLMDEPFGAVDAQTREILQFELLRIWEARPTTMVFVTHAIDEAVLMGDRVLVLKGRPAVVHEIVTVDLPRPRSRATLSDPRFAELREHVWGTLMADARRAEFEI 258
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A0S8C8V9_9PROT (ABC transporter domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C8V9_9PROT) HSP 1 Score: 371 bits (953), Expect = 7.390e-128 Identity = 176/250 (70.40%), Postives = 209/250 (83.60%), Query Frame = 1 Query: 19 VDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEI 768 V GK YG LQVFQ ++ GER+++T++GPSGCGKTTLLRCI GL+P+ +G + +DG +T P GVAMVFQHFGLFPWKTV QNV YGL++AG +A I EKVP +INLVGLSGFE YP+Q+SGGMQQRCG+ARALA EP VLLMDEPF A+DAQTREILQ E+LRIWE+RPTTM+FVTH+I+EAVLMGDRV+VLKGRPSSV EVI+V LP PR R TL RFAE+REHVWS LM EA++AEF++ Sbjct: 3 VSGAGKRYGALQVFQGVDFEVGERDVLTIIGPSGCGKTTLLRCIDGLIPLTEGGITMDGEPITAPREGVAMVFQHFGLFPWKTVFQNVAYGLKLAGASRAEIDEKVPGFINLVGLSGFEDYYPYQISGGMQQRCGVARALAVEPRVLLMDEPFGAVDAQTREILQFEMLRIWEARPTTMVFVTHAIDEAVLMGDRVMVLKGRPSSVHEVIEVDLPRPRDRSTLLHPRFAELREHVWSTLMKEAKEAEFKV 252
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A6L5FEM9_9HYPH (ATP-binding cassette domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FEM9_9HYPH) HSP 1 Score: 368 bits (944), Expect = 3.370e-126 Identity = 177/254 (69.69%), Postives = 210/254 (82.68%), Query Frame = 1 Query: 10 RIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEIQ 771 RI V +GK +G LQVF++++ GEREI+ +VGPSGCGKTT+LRCI GLLP ++G + + V +P+PGVAMVFQHFGLFPWKTV NV YGL+M G KA IAE+VP ++NLVGL+GFE AYP+Q+SGGMQQRCGLARALA EP VLLMDEPFAA+DAQTREILQ ELLRIWE+RPTTM+FVTHSIEEAVLMGDRV+VLKGRPS++ E I V LP PRSR TL RF E+RE VWS LM EAR AE++++ Sbjct: 16 RIAVRNLGKRFGALQVFRNVDFEVGEREILAIVGPSGCGKTTMLRCIDGLLPHDEGEILVGDQVVNDPIPGVAMVFQHFGLFPWKTVYDNVAYGLRMDGASKADIAERVPAFVNLVGLTGFEQAYPYQMSGGMQQRCGLARALAVEPRVLLMDEPFAAVDAQTREILQFELLRIWETRPTTMVFVTHSIEEAVLMGDRVIVLKGRPSNIDETITVDLPRPRSRATLREPRFGELRERVWSRLMSEARAAEYQLE 269
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A1F4CP59_9PROT (ABC transporter domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CP59_9PROT) HSP 1 Score: 362 bits (929), Expect = 3.320e-124 Identity = 170/250 (68.00%), Postives = 205/250 (82.00%), Query Frame = 1 Query: 19 VDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEI 768 + GK +G L+VF+DINL G RE++ ++GPSGCGKTTLLRCI GL+P+ +G ++I+G + P GVAMVFQHFGL PWKTV NV YGL++AG +A + E VP +INLVGLSGFE YP+Q+SGGMQQRCGLARALA P VLLMDEPF A+DAQTREILQ ELLRIWE+RPTTM+FVTH+I+EA+LMGDRV+VLKGRPS V E++ V LP PRSR TLA RFAE+REHVW LMD+AR+AEFE+ Sbjct: 1 MSGAGKRFGVLEVFRDINLEVGSREVLAIIGPSGCGKTTLLRCIDGLIPLTEGHIQIEGELIAAPREGVAMVFQHFGLLPWKTVFHNVAYGLKLAGASRAEVEETVPRFINLVGLSGFEHYYPYQISGGMQQRCGLARALAVGPRVLLMDEPFGAVDAQTREILQFELLRIWEARPTTMVFVTHAIDEAILMGDRVMVLKGRPSGVHEIVTVDLPRPRSRATLAHPRFAELREHVWGTLMDDARRAEFEV 250
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A534YLJ7_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YLJ7_9DELT) HSP 1 Score: 360 bits (924), Expect = 1.720e-123 Identity = 176/243 (72.43%), Postives = 204/243 (83.95%), Query Frame = 1 Query: 40 YGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEI 768 YG L VF+D++LT G REIV++VGPSGCGKTTLLRC+ GL+P+++G V DG EV P P +AMVFQHFGLFPWKTV+ NV YGL M G +A IA +VP I LVGL GFE AYP+QLSGGMQQRCGLARALA +P VLL+DEPFAAIDAQTREILQ ELLRI+ RPT M+FVTHSIEEAVLMGDRVVVLKG+PSSV EV++V LP PR+R+TLA+ RFAE+REHVW LMDEAR+AEF + Sbjct: 3 YGALHVFKDVSLTVGRREIVSIVGPSGCGKTTLLRCLDGLIPMSEGVVLFDGAEVKGPPPKMAMVFQHFGLFPWKTVRGNVSYGLAMQGASRAEIATRVPEVIRLVGLEGFEEAYPYQLSGGMQQRCGLARALAVDPDVLLLDEPFAAIDAQTREILQFELLRIFGLRPTAMVFVTHSIEEAVLMGDRVVVLKGKPSSVAEVVEVTLPRPRTRDTLASPRFAELREHVWKTLMDEARRAEFRL 245
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Match: A0A346A4M8_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A4M8_9HYPH) HSP 1 Score: 357 bits (916), Expect = 3.390e-122 Identity = 173/253 (68.38%), Postives = 206/253 (81.42%), Query Frame = 1 Query: 13 IEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCICGLLPINQGSVRIDGVEVTEPLPGVAMVFQHFGLFPWKTVQQNVGYGLQMAGVDKATIAEKVPHYINLVGLSGFETAYPHQLSGGMQQRCGLARALATEPSVLLMDEPFAAIDAQTREILQLELLRIWESRPTTMIFVTHSIEEAVLMGDRVVVLKGRPSSVFEVIDVGLPHPRSRETLATERFAEVREHVWSNLMDEARKAEFEIQ 771 + V +GK YG L+VF++I+ G REIV +VGPSGCGKTTLLRCI GLLP + G + + VTEP+ GVAMVFQHFGLFPWKTV +NV YGL+MAG KA I KVP ++ LVGL+GFE A+P+Q+SGGMQQRCGLARALA EP+VLLMDEPFAA+DAQTREILQ EL+RIWE RPT MIFVTHSIEEAVL+G RV+VLKGRPSS+ E I + LP PR+R+TL RFAE+RE VW+ LM EAR+AEF ++ Sbjct: 1 MRVRGLGKRYGALEVFRNIDFDVGAREIVAIVGPSGCGKTTLLRCIDGLLPHDAGEIWVGDQRVTEPIAGVAMVFQHFGLFPWKTVYENVAYGLRMAGAPKAEIERKVPEFVKLVGLAGFEKAFPYQMSGGMQQRCGLARALAVEPNVLLMDEPFAAVDAQTREILQFELVRIWEERPTAMIFVTHSIEEAVLLGHRVIVLKGRPSSIHETITIDLPSPRTRDTLRHPRFAELRERVWNTLMREAREAEFVLE 253 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10241.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10241.1.1 >prot_D-mesarthrocarpus_Contig10241.1.1 ID=prot_D-mesarthrocarpus_Contig10241.1.1|Name=mRNA_D-mesarthrocarpus_Contig10241.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=258bp AKARIEVDAVGKAYGDLQVFQDINLTFGEREIVTVVGPSGCGKTTLLRCIback to top mRNA from alignment at D-mesarthrocarpus_Contig10241:205..978+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10241.1.1 ID=mRNA_D-mesarthrocarpus_Contig10241.1.1|Name=mRNA_D-mesarthrocarpus_Contig10241.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=774bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:205..978+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10241:205..978+ >mRNA_D-mesarthrocarpus_Contig10241.1.1 ID=mRNA_D-mesarthrocarpus_Contig10241.1.1|Name=mRNA_D-mesarthrocarpus_Contig10241.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=774bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:205..978+ (Discosporangium mesarthrocarpum MT17_79)back to top |