mRNA_D-mesarthrocarpus_Contig1024.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A6H5JAQ6_9PHAE (Dynamin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ6_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 9.650e-129 Identity = 195/301 (64.78%), Postives = 247/301 (82.06%), Query Frame = 3 Query: 6 LNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMP-RFGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVVGEGGGSENVFKFLPQAATEVSSPSWPRRGLLHRAGSSMR 905 L+KLDAA+STSPFLENITL+DTPG+LSGEMQ H+R+Y+F V RWF DRSD+IL+LFDAH+LDVSDELMEI+ RL DHQ +RIVLNKADQ+ KA+L RVYG LMWS+GKVF+NPEVVRVY+GSFWDQPLKH AH+KLFE DQE+LT+EL DLPRLSA RKIN+LIKRT VRAHAC LS++REQMP +G+ ++R+++L+N+ VL+ V+ ++ LH ADMP + LRA LQS DF +FP L+P TL++L +++DVDI++ + EGGGS +FKF + + P PR G+L R GSS+R Sbjct: 48 LDKLDAAISTSPFLENITLVDTPGILSGEMQMHQRAYSFTDVCRWFGDRSDLILVLFDAHRLDVSDELMEILMRLKDHQSSIRIVLNKADQVDKAELRRVYGTLMWSLGKVFDNPEVVRVYIGSFWDQPLKHTAHKKLFETDQESLTRELTDLPRLSATRKINQLIKRTNSVRAHACVLSYLREQMPWMYGRARRREDLLDNMDGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPATLQQLRHVVDVDIHQALQEGGGSAKIFKF----SNKRGRP--PRAGMLSRVGSSIR 342
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: D7G5K7_ECTSI (RME1L2, RME1-like GTPase/ATPase without a C-terminal EH domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K7_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 9.700e-127 Identity = 196/301 (65.12%), Postives = 246/301 (81.73%), Query Frame = 3 Query: 6 LNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMP-RFGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVVGEGGGSENVFKFLPQAATEVSSPSWPRRGLLHRAGSSMR 905 L+KLDAA+STSPFLENITL+DTPGVLSGEMQ H+R+Y+F V+RWF DRSD+IL+LFDAH+LDVSDELMEI+ RL DHQ +RIVLNKADQ+ KA+L RVYGALMWS+GKVF+NPEVVRVY+GSFWDQPLKH AH KLFEADQE+LT+EL DLPRLSA RKIN+LIKR VRAHAC LS++REQ P +G+ ++R+++L N++ VL+ V+ ++ LH ADMP + LRA LQS DF +FP L+P LR+L +++DVDI++V+ EGGGS +FKF + + P R G+L R GSS+R Sbjct: 136 LDKLDAAISTSPFLENITLVDTPGVLSGEMQMHQRAYSFADVSRWFGDRSDLILVLFDAHRLDVSDELMEILMRLKDHQSSIRIVLNKADQVDKAELRRVYGALMWSLGKVFDNPEVVRVYIGSFWDQPLKHTAHEKLFEADQESLTRELTDLPRLSATRKINQLIKRANSVRAHACVLSYLREQTPWMYGRARRREDLLENMEGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPAALRQLRHVVDVDIHQVLQEGGGSAKIFKF----SNKRGRPQ--RAGMLSRVGSSIR 430
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A835YIA7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA7_9STRA) HSP 1 Score: 292 bits (748), Expect = 4.560e-91 Identity = 144/261 (55.17%), Postives = 195/261 (74.71%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPRFGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKV 785 FL +L A++S SPFLE+ITL+DTPG L+GE +H+RSY+FP VARWFADRSD+I+L+FDAHKLD+SDEL ++M LV+HQDKVRIVLNKADQI +A LMRVYGALMW++G +F NPEVVRVYVGSFWD+PLK+ AH +LFE DQ AL EL LP+ SA RK++ ++ R + ++AH C L IR Q + E+L +L V ++V++++ LH AD+P A L++ D P L P TL++L++++DV+ +V Sbjct: 86 FLRRLTASISPSPFLEHITLVDTPGALTGEAHQHRRSYSFPVVARWFADRSDLIVLIFDAHKLDISDELRDVMEGLVEHQDKVRIVLNKADQIERAHLMRVYGALMWTMGTIFPNPEVVRVYVGSFWDRPLKYTAHARLFERDQTALLGELAALPKESATRKMDAIMARVKRLKAHVCVLGHIRAQA-------YKDELLEDLGGVFEEVRLKHGLHEADLPDVAKFGAVLRALDVADLPALRPATLQQLDDVVDVEFPRV 339
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A7S2KM23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KM23_9STRA) HSP 1 Score: 282 bits (722), Expect = 3.230e-85 Identity = 141/272 (51.84%), Postives = 197/272 (72.43%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQD-KVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPR-FGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVV-GEGGGSE 809 FLNK +A+V+ SP L+ +TLIDTPGVLSGE QR R+Y+F +VARWFADRSD+ILLLFDAHKLD+SDEL EI+ ++ + D KVR VLNKAD +G+ +L+RVYG+L+WS+GK+F PEV RVY GSFWDQPL H+ + +FE D+E L +EL++LP +A RK+NE++KR R ++ H C L ++ QMP FG+ K + ++ NL VL +VK Y+L DMP +L +KL++ +F +FP L + L + + DI +++ G GG S+ Sbjct: 165 FLNKFEASVTPSPLLKRVTLIDTPGVLSGEKQRLARAYDFSEVARWFADRSDLILLLFDAHKLDISDELKEIIEKIRPYNDDKVRCVLNKADGVGREQLVRVYGSLLWSMGKIFQTPEVARVYCGSFWDQPLLHEDFKDMFERDEELLIEELMNLPASAAARKVNEVVKRIRAIKVHLCILGHLKRQMPLLFGREKTQMNLIKNLPSVLKEVKTIYDLSDGDMPNVNVLASKLRASNFQSFPTLDSKIIYELNAMTEHDIPELMRGVGGVSD 436
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: B8C4H7_THAPS (Eh domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4H7_THAPS) HSP 1 Score: 269 bits (688), Expect = 1.450e-81 Identity = 135/267 (50.56%), Postives = 188/267 (70.41%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQ-DKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPRF-GKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGP-EILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVVGE 794 FLN + S+SP L+ IT IDTPGVLSGE QR R+Y+F QVA+WFADRSD+ILLLFDAHKLD+SDE ++ + H DK+R VLNKAD + + +L+RVYG+LMWS+GK+F++PEVVRVY GS+W+ L ++ +FE D++ L +ELVDLPR +A RK+N+++ R RLV+ HAC L +R+ P F GK K R+EILN L+ V+D V+++++L DMP P E + DF FP + + RL +I+ DI ++V + Sbjct: 119 FLNHFVGSSSSSPLLKRITFIDTPGVLSGEKQRINRTYDFAQVAKWFADRSDLILLLFDAHKLDISDEFKNVIDTISQHNGDKIRCVLNKADAVTREQLVRVYGSLMWSMGKIFDSPEVVRVYTGSYWNGSLVNNDFEHMFEKDEQLLVRELVDLPRCAAERKVNQMVNRIRLVKVHACILGTVRQMTPAFFGKKKTREEILNGLETVMDNVRVKFDLSKGDMPEPAEFAKCLDTFSDFSVFPPIDNTLIDRLNRLIEEDIPEIVND 385
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A7S1XM26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM26_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.100e-79 Identity = 134/268 (50.00%), Postives = 189/268 (70.52%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPRF-GKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQS--HDFMTFPRLSPNT---LRRLENIIDVDIYKVV 788 FLN+ + + +S L NI+++DTPGVLSGE QR R Y+F +V +WFA RSD+ILLLFDAHKLD+SDE ++ L H+DK+R +LNKADQ+ + KLMRVYGALMWS+GKV NPEV++VYVGSFWDQPL+++ + +LFE ++ L +L DLPR SAVRKINEL+KRTRL++ H LS++++QMP GK KK+ E++ N+ D V+ +YNL D P E +AK F P+L+ L +++ ++ V+I +++ Sbjct: 124 FLNRFEGSQLSSQVLRNISIVDTPGVLSGEKQRLTRGYDFTEVCQWFAQRSDLILLLFDAHKLDISDEFKSVIQSLKGHEDKIRCILNKADQVDRQKLMRVYGALMWSLGKVVENPEVLKVYVGSFWDQPLRYEDNAELFEMEERDLMNDLRDLPRNSAVRKINELVKRTRLLKVHVHLLSYLKDQMPAMMGKEKKQAELIRNMGDCFRNVQRQYNLPTGDFPEIEKFKAKCADLMGGFQGLPKLNKRNQKLLDKIDTVLGVEIPRLM 391
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A8K1FI61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI61_PYTOL) HSP 1 Score: 268 bits (686), Expect = 2.220e-79 Identity = 133/263 (50.57%), Postives = 183/263 (69.58%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPRF-GKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVV 788 FLNK +AA LENIT+IDTPG+LSGE QR R Y+F QVA+WFA+RSDMILLLFDAHKLD+SDE ++ L H DK+R +LNKADQI + +LMRVYGALMWS+GKV PEV+RV++GSFWDQP H + LFEA+++ L EL +LP+ +AVRKINE +KR RL + HA + +R++MP GK KK++E++ N+ + +V+ +YNL D P + R K F F L+ ++ +++++ DI K++ Sbjct: 153 FLNKFEAAQLPCKILENITVIDTPGILSGEKQRISRGYDFVQVAKWFAERSDMILLLFDAHKLDISDEFQRVIEVLKGHDDKIRCILNKADQIDQQRLMRVYGALMWSMGKVLKTPEVMRVFIGSFWDQPKLHTDNAALFEAEEKDLMTELRNLPQNAAVRKINEFVKRARLAKVHAYVIGHLRDKMPSMVGKEKKQKELIENMDGIFREVQRKYNLPPGDFPNLDDFRQKCVERKFSKFHNLNAKGIQEIDDLLSKDIPKLM 415
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: D7G401_ECTSI (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G401_ECTSI) HSP 1 Score: 270 bits (689), Expect = 2.460e-79 Identity = 140/303 (46.20%), Postives = 193/303 (63.70%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPRF-GKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKV-------VGEGGGSENVFKFLPQAATEVSSPSWPRRGLLHR 887 FLNK +A+ SP L NIT++DTPGVLSGE QR R Y+F V WFA+R+D+ILLLFDAHKLD+SDE ++ RL DK+R++LNKADQ+ + KLMRVYGALMWS+GK+ PEV+RVYVGSFWD+PL +D + LF+ ++ L +L +LPR SAVRKINEL+KR RL + HA + ++R QMP GK K ++++ +L V V ++NL D P E R+KL +F FP+L L L+ ++ VDI ++ V E + F+ ++ + P + G R Sbjct: 124 FLNKFEASQLPSPVLRNITIVDTPGVLSGEKQRVSRGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQVDRQKLMRVYGALMWSMGKIIRTPEVLRVYVGSFWDEPLMYDDNAALFDMEERDLMNDLRELPRNSAVRKINELVKRCRLAKVHAYIIGYLRAQMPSMMGKEKVQKQLTADLAQVFRAVMKQHNLAPGDFPDLEPFRSKLADTNFTKFPKLKVKMLEELDEMLSVDIPRLMEMLPRTVAPTRADEQIRNFMQESNDTPTPPKYNAPGGASR 426
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: UPI001863CD59 (EH domain-containing protein 3-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863CD59) HSP 1 Score: 267 bits (683), Expect = 5.140e-79 Identity = 132/263 (50.19%), Postives = 185/263 (70.34%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPR-FGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVV 788 FLN+L A +P LE+I++IDTPG+LSGE QR R YNF V WFA+R D I+LLFDAHKLD+SDE E++ L +H+DK+R+VLNKADQI +LMRVYGALMWS+GK+ N PEVVRVY GSFW +PL +RKLFEA++ L ++ LPR +A+RK+N+LIKR RL + HA +S +R++MP FGK K++E+++NL +V +++ L D P ++ +LQ HD FP L P L +++++ DI +++ Sbjct: 132 FLNRLVCAQLPNPVLESISVIDTPGILSGEKQRISRGYNFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIQTQQLMRVYGALMWSLGKIINTPEVVRVYTGSFWSRPLLVPDNRKLFEAEESDLFTDIQSLPRNAAIRKLNDLIKRARLAKVHAYIVSSLRKEMPAVFGKENKKRELISNLGEVYSRIEKERQLSRGDFPNLRKMQEQLQDHDLSKFPPLKPKLLETVDDMLSHDIAQLM 394
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Match: A0A8B7Y8J4_ACAPL (EH domain-containing protein 1-like n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7Y8J4_ACAPL) HSP 1 Score: 267 bits (683), Expect = 6.140e-79 Identity = 130/263 (49.43%), Postives = 185/263 (70.34%), Query Frame = 3 Query: 3 FLNKLDAAVSTSPFLENITLIDTPGVLSGEMQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQDKVRIVLNKADQIGKAKLMRVYGALMWSVGKVFNNPEVVRVYVGSFWDQPLKHDAHRKLFEADQEALTQELVDLPRLSAVRKINELIKRTRLVRAHACTLSFIREQMPR-FGKVKKRQEILNNLQDVLDQVKMRYNLHAADMPGPEILRAKLQSHDFMTFPRLSPNTLRRLENIIDVDIYKVV 788 FLN+ +++ SP L++IT+IDTPG+LSGE QR R YNF V WFA+R+D I+LLFDAHKLD+SDE + L + DK+RIVLNK+D + +LMRVYGALMWS+GKV N PEV RVY+GSFWD+PL D +RKLFEA++ L +++ LPR +A+RK+N+LIKR RL + HA +S +R MP FGK K+Q+++NNL DV +++ YN+ A D P + ++ L DF F +L P + +L+ ++ D+ +++ Sbjct: 132 FLNRFQCSLTPSPVLDSITIIDTPGILSGEKQRVDRGYNFVGVLEWFAERADRIILLFDAHKLDISDEFRRCIEALRGNDDKIRIVLNKSDMVDHQQLMRVYGALMWSLGKVINTPEVSRVYIGSFWDKPLHFDMNRKLFEAEELDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISTLRRDMPSMFGKESKKQQLINNLADVYKEIERSYNISAGDFPPMKRMKEVLADMDFTKFHQLKPKMIEKLDQMLQGDMTRLM 394 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1024.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1024.4.1 >prot_D-mesarthrocarpus_Contig1024.4.1 ID=prot_D-mesarthrocarpus_Contig1024.4.1|Name=mRNA_D-mesarthrocarpus_Contig1024.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=405bp MQRHKRSYNFPQVARWFADRSDMILLLFDAHKLDVSDELMEIMSRLVDHQback to top mRNA from alignment at D-mesarthrocarpus_Contig1024:13055..23936- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1024.4.1 ID=mRNA_D-mesarthrocarpus_Contig1024.4.1|Name=mRNA_D-mesarthrocarpus_Contig1024.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=10882bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1024:13055..23936- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1024:13055..23936- >mRNA_D-mesarthrocarpus_Contig1024.4.1 ID=mRNA_D-mesarthrocarpus_Contig1024.4.1|Name=mRNA_D-mesarthrocarpus_Contig1024.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1215bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1024:13055..23936- (Discosporangium mesarthrocarpum MT17_79)back to top |