mRNA_D-mesarthrocarpus_Contig1024.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.430e-18 Identity = 86/260 (33.08%), Postives = 118/260 (45.38%), Query Frame = 1 Query: 1 VPSIHRTSHRKWTAKAGVSLASLWRLCQEEKV----RKIMPVLSDQQKVDRVTFVLSHTDRRGGG----WGIRGQSVRLGARGREV--V*HPQTWERCIPAPH*ASPQTPTGTE*EFHYEGDGPCSCSPP*ED----VQWDVVRWEIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMPRPEGHIIFALQDGATPHTKGGD------HRGHGGGGGGDTVMETQPANSPDLNVNDLGFFH 720 VPS R++ R A G+ SLW L Q K+ ++ P+LS +QK DR FV R G G W V L + + + H P P T+ F C+ + P D V WD +IG+WPIV+TKVA R SK+R +GT V V V Y++L+++ VIP +A P G I+ Q+ A PH D R +G + + QPA SP+ NV DLGFF+ Sbjct: 28 VPSYRRSNFRSLAAATGIPNTSLWNLLQANKLCRRTSRVKPMLSVKQKSDRFKFVQKFV-RVGHGRYRVWHDVLDYVHLNEKWFYITQINHRDYLWHDEPIPQRKVQSKRHITKVMFL------CAVARPRFDFGRRVMWD---GKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVVAASRKNGW----NIQLVAQPAMSPNFNVLDLGFFN 273
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 90.5 bits (223), Expect = 1.080e-16 Identity = 82/254 (32.28%), Postives = 112/254 (44.09%), Query Frame = 1 Query: 1 VPSIHRTSHRKWTAKAGVSLASLWRLCQEEKVRK----IMPVLSDQQKVDRVTFVLSHTDRRGGGWGIRGQSVRLGARGREVV*HPQTW------ERCIPAPH*ASPQTPTGTE*EFHYEGDGPCSCSPP*EDV-QWDVVRWEIGIWPIVDTKVAQRTSKHRPKGTKVLV-LAMVDGERYKKLMIEAVIPVFKACMPRP-EGHIIFALQDGATPHTKGGDH--RGHGGGGGGDTVMETQPANSPDLNVNDLGFF 717 +P R + + A GVS + RL +E R+ + P L+++ ++ RV F LSHT R+ GG + +VV + W +C F + + + P D + +IGIW + A+RTSK+RPKGT VL + VD E YK I +IP KA PR + I+ QD A PH D G GG D M QP NSPDLNV DLG+F Sbjct: 91 IPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMF-------DVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYF 337
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A6A3WM28_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WM28_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.420e-16 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 394 EIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMPRPEGHIIFALQDGATPHTKGGDHRGHGGG--GGGDTVMETQPANSPDLNVNDLGFF 717 +IGIWPIV+ AQR+S +RPKG V + Y+KL+++ V+P F+A +P G +F QD A PH + D G G M QP SP+LNV DLGFF Sbjct: 22 KIGIWPIVEETTAQRSSVNRPKGAPVTKSVSMTRVLYRKLLVDKVLPAFRAKLPVRRGTTVFVQQDNAGPHVREDDTEVETAGKVDGWKIKMRCQPPRSPELNVLDLGFF 131
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-15 Identity = 82/257 (31.91%), Postives = 124/257 (48.25%), Query Frame = 1 Query: 1 VPSIHRTSHRKWTAKAGVSLASLWRLCQEEKVRK----IMPVLSDQQKVDRVTFVLSHTDRRG--GGWGIRGQSVRLGARGREVV*HPQTWERCIPAPH*ASPQTPTGTE*EFHYEGDGPCSCSPP*EDVQWDV--VRW---EIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMPR----PEGHIIFALQDGATPH--TKGGDHRGHGGGGGGDTVMETQPANSPDLNVNDLGFFH 720 VP R R +A G+ +SL RL + +RK P+L+ + K+ RV ++L H D G W + + + + + +T + P A P++ T + C+ + P +WD W +IGIWP V + A+R+S +RPKGT V VDGE YK++++E V+P PR PE IF +D A PH T + + G + ++TQP NSPD+NV DLGFF+ Sbjct: 195 VPMKDRGDLRTLSAVTGIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNGRFDDWF---KWIHIDEKWFYLK---RTKQTTYLLPGEAEPKS-TSKSKNHMTKVMFLCATARP----RWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPE---IFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFN 437
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A6A4XRJ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XRJ4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.710e-15 Identity = 57/126 (45.24%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 373 QWDVVR-----WEIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMP---RPEGHIIFALQDGATPHTKGGDHR--GHGGGGGGDTVMETQPANSPDLNVNDLGFFH 720 +WD R ++GIWP V+ VAQRTSK+RPKGT VDG YK+ ++ VIP KA P +P G +F QD A+PH HG G M QPANSPD NV DLGFF+ Sbjct: 144 RWDAHRKTFFDGKLGIWPFVEYAVAQRTSKNRPKGTIETKTKTVDGAVYKESILNKVIPAIKARFPIGGQPNG--VFVQQDNASPHKCVTTEALIAHGVTG---ISMANQPANSPDFNVLDLGFFN 264
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.750e-15 Identity = 76/268 (28.36%), Postives = 114/268 (42.54%), Query Frame = 1 Query: 4 PSIHRTSHRKWTAKAGVSLASLWRLCQEEKVRK----IMPVLSDQQKVDRVTFVLSHTDRRGGGWGIRGQSVRLGARGREVV*HPQTWERCIPAPH*ASPQTP-TGTE*EFHYEGDGP------------------CSCSPP*EDV----QWDVVRWEIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMPRPEGHIIFALQDGATPHTKGGDHRGHGGGG--GGDTVMETQPANSPDLNVNDLGFFH 720 P+ R ++R GV +LWRL + +K+ + + P+L+ Q +V R F S +R G +GR + W + H T F+ D P C+ + P D WD ++G+WP V+T++A+R SK+R +GT V V V Y++ +++ VIP +A P G I+ QD A PH D G G + + QPA SPD NV DLGFF+ Sbjct: 96 PAHLRGNYRTMAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSF--------------IRDGYQGR------RQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWD---GKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFN 340
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A485KGK4_9STRA (Aste57867_5319 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGK4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.020e-15 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 394 EIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMP---RPEGHIIFALQDGATPHTKGGDH--RGHGGGGGGDTVMETQPANSPDLNVNDLGFFHPSSN 732 +IG+WP V+ +A+RTSK+RPKG+ VDG YK ++I V+P +A P +P G +F QD A PHT R HG G M QPANSPD NV DLGFF+ N Sbjct: 112 KIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNG--VFIQQDNAGPHTCVTTKFLRAHGVSG---ISMTCQPANSPDFNVLDLGFFNAIQN 224
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A485KC85_9STRA (Aste57867_3928 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC85_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.430e-15 Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 394 EIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMP---RPEGHIIFALQDGATPHTKGGDH--RGHGGGGGGDTVMETQPANSPDLNVNDLGFFHPSSN 732 +IG+WP V+ +A+RTSK+RPKG+ VDG YK ++I V+P +A P +P G +F QD A PHT R +G G M QPANSPD NV DLGFF+ N Sbjct: 22 KIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNG--VFIQQDNAGPHTCVTTKFLRAYGVSG---ISMTCQPANSPDFNVLDLGFFNAIQN 134
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: A0A485KCF4_9STRA (Aste57867_2720 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCF4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.000e-15 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 394 EIGIWPIVDTKVAQRTSKHRPKGTKVLVLAMVDGERYKKLMIEAVIPVFKACMP---RPEGHIIFALQDGATPHTKGGDH--RGHGGGGGGDTVMETQPANSPDLNVNDLGFFHPSSN 732 +IG+WP V+ +A+RTSK+RPKG+ VDG YK ++I V+P +A P +P G +F QD A PHT R HG G M QPANSPD NV DLGFF+ N Sbjct: 268 KIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNG--VFIQQDNAGPHTCVTTKFLRAHGVSG---ISMTCQPANSPDFNVLDLGFFNAIQN 380
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 84.3 bits (207), Expect = 7.890e-15 Identity = 78/237 (32.91%), Postives = 106/237 (44.73%), Query Frame = 1 Query: 52 VSLASLWRLCQEEKVRK----IMPVLSDQQKVDRVTFVLSHTDRRGGGWGIRGQSVRLGARGREVV*HPQTW------ERCIPAPH*ASPQTPTGTE*EFHYEGDGPCSCSPP*EDV-QWDVVRWEIGIWPIVDTKVAQRTSKHRPKGTKVLV-LAMVDGERYKKLMIEAVIPVFKACMPRP-EGHIIFALQDGATPHTKGGDH--RGHGGGGGGDTVMETQPANSPDLNVNDLGFF 717 VS + RL +E R+ + P L+++ ++ RV F LSHT R+ GG + +VV + W +C F + + + P D + +IGIW + A+RTSK+RPKGT VL + VD E YK +I +IP KA PR + I+ QD A PH D G GG D M QP NSPDLNV DLG+F Sbjct: 12 VSTTVVRRLLKEGVFRRHSSNVKPALTEENRLARVQFELSHTTRKRGGEVVFADMF-------DVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYF 241 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1024.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1024.1.1 >prot_D-mesarthrocarpus_Contig1024.1.1 ID=prot_D-mesarthrocarpus_Contig1024.1.1|Name=mRNA_D-mesarthrocarpus_Contig1024.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=84bp MVDGERYKKLMIEAVIPVFKACMPRPEGHIIFALQDGATPHTKGGDHRGHback to top mRNA from alignment at D-mesarthrocarpus_Contig1024:5164..6103+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1024.1.1 ID=mRNA_D-mesarthrocarpus_Contig1024.1.1|Name=mRNA_D-mesarthrocarpus_Contig1024.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=940bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1024:5164..6103+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1024:5164..6103+ >mRNA_D-mesarthrocarpus_Contig1024.1.1 ID=mRNA_D-mesarthrocarpus_Contig1024.1.1|Name=mRNA_D-mesarthrocarpus_Contig1024.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=252bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1024:5164..6103+ (Discosporangium mesarthrocarpum MT17_79)back to top |