mRNA_D-mesarthrocarpus_Contig10239.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A6H5L2A7_9PHAE (Pyruvate carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A7_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.170e-31 Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVEL 306
VTFELNGQ RVV+V+D+S+AG R KAD + +GSVGAPMPGVVVG+KV+ G+TVKQGQPLLVLSAMKMETNVAS NIQG+DLVVE+
Sbjct: 826 VTFELNGQPRVVRVKDKSVAGSITARGKADDSVIGSVGAPMPGVVVGIKVHPGETVKQGQPLLVLSAMKMETNVASPADGIVKALHVKEGDNIQGNDLVVEI 927
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: D8LCR8_ECTSI (Pyruvate carboxylase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D8LCR8_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.180e-31 Identity = 67/102 (65.69%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVEL 306
VTFELNGQ RVV+V+D+S+AG R KAD + +GSVGAPMPGVVVG+KVN G+TVKQGQPLLVLSAMKMETNVAS NIQG+DLV E+
Sbjct: 1049 VTFELNGQPRVVRVKDKSVAGSITARGKADDSVVGSVGAPMPGVVVGIKVNPGETVKQGQPLLVLSAMKMETNVASPADGIVKALHVKEGDNIQGNDLVAEI 1150
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A836CLQ1_9STRA (Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLQ1_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.480e-23 Identity = 68/103 (66.02%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELK 309
V FELNGQQR++KV+D ++ R KADP+N GSVGAPMPGVV+GVKV GD V GQPL+VLSAMKMET+ XXXXXXXXXXXXXXX DL+VE++
Sbjct: 1043 VVFELNGQQRIIKVKDNAVGATATHRAKADPSNAGSVGAPMPGVVIGVKVKKGDKVASGQPLVVLSAMKMETSXXXXXXXXXXXXXXXXXXXXXXXDLIVEIE 1145
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A4D9CY33_9STRA (Pyruvate carboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY33_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.300e-22 Identity = 57/103 (55.34%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELK 309
V FELNGQQRV+K +D K R KAD GSVGAPMPG+VV VKV +G VK+GQPLLVLSAMKMET + S NI G DLVVE++
Sbjct: 1109 VIFELNGQQRVIKTKDTKADVNVKVRPKADLGIPGSVGAPMPGLVVEVKVKVGQAVKKGQPLLVLSAMKMETVLTSPAAGTVKTLLVGAGDNIAGGDLVVEIE 1211
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A835YR17_9STRA (Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR17_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 8.410e-22 Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELKP 312
V FELNGQQR++KV+D S+ R KADP+ +GSVGAPMPGVV+GVKV G VK GQ L+VLSAMKMET+ XXXXXXXXXXXXXXX DL+++++P
Sbjct: 1084 VVFELNGQQRIIKVKDNSVGASATRRGKADPSMIGSVGAPMPGVVLGVKVKTGARVKAGQSLVVLSAMKMETSXXXXXXXXXXXXXXXXXXXXXXXDLIIDIEP 1187
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A1V9XHA7_9ACAR (Pyruvate carboxylase n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XHA7_9ACAR) HSP 1 Score: 97.8 bits (242), Expect = 1.570e-21 Identity = 51/104 (49.04%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELKP 312
V FELNGQ R V + D+++A + KAD N+GSVGAPMPG V+G++V +GD VK+G PL+VLSAMKME V S +QG DL+VE++P
Sbjct: 1072 VFFELNGQLRSVFILDKTLAEVIEAHPKADKANVGSVGAPMPGSVIGIRVKVGDVVKKGDPLVVLSAMKMEMVVQSPVAGKVKSLAAAIDMRMQGDDLLVEIEP 1175
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: UPI0002659000 (pyruvate carboxylase, mitochondrial n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002659000) HSP 1 Score: 95.1 bits (235), Expect = 1.380e-20 Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELKP 312
V FELNGQ R V V D+++A E KAD +N GSVGAPMPG V+ ++V +GD VK+G PL+VLSAMKME V + +QG DL+VE+ P
Sbjct: 1072 VFFELNGQLRSVLVVDKTLAEEIVSHPKADKSNKGSVGAPMPGSVIDIRVEVGDVVKKGDPLVVLSAMKMEMVVQASVAGKVKNVAVTKDMKLQGEDLLVEIDP 1175
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A662WMI8_9STRA (Lipoyl-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMI8_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.820e-20 Identity = 53/102 (51.96%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVEL 306
V FELNG+QRV+KV+D + T + KA + GSVGAPMPGVV+ V+V G+ VK G PLLVLSAMKMET VAS N+ G DL+VE+
Sbjct: 106 VIFELNGRQRVIKVKDEAAGVTTTAKPKAT-SMAGSVGAPMPGVVLDVRVKKGEMVKAGSPLLVLSAMKMETVVASPVSGRVVSIHADVGDNMLGGDLLVEI 206
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A7M7JEP1_VARDE (Pyruvate carboxylase n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7JEP1_VARDE) HSP 1 Score: 94.0 bits (232), Expect = 3.510e-20 Identity = 50/104 (48.08%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELKP 312
V FELNGQ R V V D+++A + KAD +N GSVGAPMPG V+ ++V +GD VK+G PL+VLSAMKME V + +QG DL+VE++P
Sbjct: 1072 VFFELNGQLRSVFVVDKTLAEVIEAHPKADKSNAGSVGAPMPGSVIDIRVKVGDVVKKGDPLVVLSAMKMEMVVQAPIAGKVRSVAAAKDMRMQGDDLLVEIEP 1175
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Match: A0A6I9PIS1_9TELE (pyruvate carboxylase, mitochondrial-like n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6I9PIS1_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 4.490e-20 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 1 VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVNIGDTVKQGQPLLVLSAMKMETNVASXXXXXXXXXXXXXXXNIQGSDLVVELK 309
V FELNGQ R V V+D E KF KA + G VGAPMPG VV VKV +G V++GQPL VLSAMKMET V S +++G DL++E++
Sbjct: 32 VFFELNGQLRSVLVKDTVAMKEMKFHPKAQKSIKGQVGAPMPGKVVEVKVEVGSKVEKGQPLCVLSAMKMETVVNSPLAGTIKAVHVRADASLEGGDLILEIE 134 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10239.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10239.5.1 >prot_D-mesarthrocarpus_Contig10239.5.1 ID=prot_D-mesarthrocarpus_Contig10239.5.1|Name=mRNA_D-mesarthrocarpus_Contig10239.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=105bp VTFELNGQQRVVKVQDRSIAGETKFRTKADPTNLGSVGAPMPGVVVGVKVback to top mRNA from alignment at D-mesarthrocarpus_Contig10239:3291..4134+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10239.5.1 ID=mRNA_D-mesarthrocarpus_Contig10239.5.1|Name=mRNA_D-mesarthrocarpus_Contig10239.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=844bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10239:3291..4134+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10239:3291..4134+ >mRNA_D-mesarthrocarpus_Contig10239.5.1 ID=mRNA_D-mesarthrocarpus_Contig10239.5.1|Name=mRNA_D-mesarthrocarpus_Contig10239.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=315bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10239:3291..4134+ (Discosporangium mesarthrocarpum MT17_79)back to top |