mRNA_D-mesarthrocarpus_Contig10236.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: D8LHT5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT5_ECTSI) HSP 1 Score: 214 bits (546), Expect = 2.710e-62 Identity = 107/181 (59.12%), Postives = 134/181 (74.03%), Query Frame = 1 Query: 7 LKVNWQPRGRGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCRSTLRVLCLGTCGRCLGDDTVEALAREGGMPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALADRE 549 +KV+W+P G+GSR GK + SLF +CL L+ADNF ++ESLG ++ E RN L ++CRQLKLT E L L E GV E+ILPDCSRIEP QM S+LQCR TLRVL LGTCGRC+GD T+EAL + GG+P LE +L G Y+LTDAGVL+L+ CP LTGLEL A IT ++E + D+E Sbjct: 283 IKVDWKPTGKGSRSGKSRTIPSLFRLCLDLLADNFDHIESLGDVSPEVRNHLAAVMCRQLKLTTEALQRL-SEPGVTEIILPDCSRIEPDQMRNSILQCRRTLRVLRLGTCGRCVGDATLEALTKAGGVPRLEMASLAGTYQLTDAGVLELLSCCPRLTGLELSANSRITLKALEKMVDKE 462
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A8J9RC70_9CHLO (Probable f-box/LRR-repeat protein 20 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RC70_9CHLO) HSP 1 Score: 100 bits (249), Expect = 2.400e-21 Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 16 NWQPRGRGSRVGK--VAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCRST-LRVLCLGTCGRCLGDDTVEALAREGGMPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELP 498 +W+PR R + G +V LF MCLAL+ ++ VE+L + T + +L + ++T E L L E+G E++LP+CS++ P+ + E+L+ C + L L LG CGR GD A+ G + L +TLGGAYR TDA + KL+ P L L LP Sbjct: 157 DWRPR-RDAPAGPRPAPRVGKLFGMCLALLVEHIDNVETLYGLPTVIKVQLARAVANARRMTPEVLR-LFTEDGPDEVVLPECSQLAPAALAEALVPCATPRLERLELGMCGRGFGDAVAAAMVAAGPLSALRCLTLGGAYRTTDADLAKLLAAAPGLVELRLP 318
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: I0YSM9_COCSC (RNI-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YSM9_COCSC) HSP 1 Score: 96.3 bits (238), Expect = 6.110e-20 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 16 NWQPR---GRGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCRST-LRVLCLGTCGRCLGDDTVEALAREGGMPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELP 498 +W+PR G RV +V LF MCLA++ + VE+L M T + +L + ++T E L L ++G E++LP+CS++ P+ + E+L+ C + L L LG CGR GD A+ G + L +TLGGAYR TDA + KL+ P L L LP Sbjct: 88 DWRPRRDPALGPRVPP--RVGKLFSMCLAVLVEYIDDVETLYGMPTMIKVQLARAVADARRMTPEVLR-LFTDDGPDEVVLPECSQLMPATLAEALVPCATPRLERLELGLCGRGFGDAVAAAMVAGGQLSRLRSLTLGGAYRTTDADLAKLLAAAPDLAELRLP 249
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A2I0VCT1_9ASPA (F-box/LRR-repeat protein 4 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VCT1_9ASPA) HSP 1 Score: 86.7 bits (213), Expect = 1.820e-16 Identity = 60/184 (32.61%), Postives = 95/184 (51.63%), Query Frame = 1 Query: 10 KVNWQPRG--RGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCR-STLRVLCLGTCGRCLGDDTVEALAREGG--MPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALADR 546 K+ W P R VGK+ V L D+CL ++ +N + +ESL + ++ + +MLC ++++ L L+ + E+ L DCS +E QC L+VL L CGRCL D + + + +P L R++L GAY L+D G+ + + P LT L L P IT + ALA++ Sbjct: 494 KIPWTPSNMRRHITVGKI--VPPLKDLCLKVLCENAEEIESLEGLPDAIKHNIALMLCNSRRMSSHFLG-LLTKGSPLEIYLSDCSWATDKLFVEVFSQCNIDNLKVLQLDFCGRCLPDYVLHSTFAKAPKCLPSLNRLSLKGAYCLSDGGLDAIAASAPLLTSLNLSQCPLITSKGILALAEK 674
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A835SCW4_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835SCW4_VANPL) HSP 1 Score: 86.3 bits (212), Expect = 2.410e-16 Identity = 58/185 (31.35%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 7 LKVNWQPRG--RGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCR-STLRVLCLGTCGRCLGDDTVEA-LAREGG-MPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALADR 546 +KV W P + +++GK+A SL D+C+ ++ +N + VESL + +++L +LC ++++ L++ +E+ + DCS Q E QC S L+VL L CGRCL D + + LA+ +P L R++L GAY L+D G+ ++ + P L ++L +T + LAD+ Sbjct: 493 VKVQWTPSNEQKTAKMGKLAP--SLKDLCVNVLYENVEEVESLECLPDAIKHKLVNLLCHSRRMSSHVFGLLVKGSP-SEICISDCSWATDKQFEELFSQCNISNLKVLQLNLCGRCLPDYVLHSTLAKAPNCLPSLSRLSLKGAYGLSDGGLAAIIASAPWLQSVDLSQCSLLTHKGITYLADK 674
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: D8TIZ9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIZ9_VOLCA) HSP 1 Score: 85.9 bits (211), Expect = 3.060e-16 Identity = 60/174 (34.48%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 19 WQPRGRGSRVGKVAK--VSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESL-LQCRSTLRVLCLGTCGRCLGDDTVEALAREGGMPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVE 531 WQP R +G + V LF++CL ++ VESL + + R+ C + K++ E +A L + +E++LP+C++++ M E L + + L+ L LG CGR GD++ LA G + LE + L GAYRL+DAG+ K++ PSL L +P P +T A V+ Sbjct: 89 WQP-SRDPFLGPHTRDPVRPLFEICLDVLTAYVDCVESLWGVPDVIKARMAASACARRKMSPE-VARLFFADSPSEVVLPECTQLDGPAMGEMLRVLDNNKLQRLELGFCGRGFGDESAGLLAAGGPLEQLESLELAGAYRLSDAGLEKVLSVAPSLDRLAVPQCPRLTGAVVD 260
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A835S3I5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S3I5_VANPL) HSP 1 Score: 85.9 bits (211), Expect = 3.290e-16 Identity = 57/185 (30.81%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 7 LKVNWQPRG--RGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCR-STLRVLCLGTCGRCLGDDTVEA-LAREGG-MPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALADR 546 +K+ W P + +++GK+A SL D+C+ ++ +N + VESL + +++L +LC ++++ L++ +E+ + DCS Q E QC S L+VL L CGRCL D + + LA+ +P L R++L GAY L+D G+ ++ + P L ++L +T + LAD+ Sbjct: 377 VKIQWTPSNEQKTAKIGKLAP--SLKDLCVNVLYENVEEVESLECLPDAIKHKLVNLLCHSRRMSSHVFGLLVKGSP-SEICIIDCSWATDKQFEELFSQCNISNLKVLQLNLCGRCLPDYVLHSTLAKAPNCLPSLSRLSLKGAYGLSDGGLAAIIASAPWLQSVDLSQCSLLTHKGITYLADK 558
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A835SZX3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SZX3_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 1.470e-15 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 64 VSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCRS-TLRVLCLGTCGRCLGDDTVEALAREGGMPC--LERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALAD 543 V LF CL ++ VESL + + RL +C + K++ E A L E+++PDC++++ M + L + +L+ L LG CGR GDD + G P LE +TL GAYRL+DAG++KL+ P+L L L G T A ++ L + Sbjct: 96 VKPLFGHCLDVLTAYIDCVESLWGVPDAIKVRLAAHVCARRKMSPEA-ARLFATSAPTEVLVPDCTQLDAPAMADLLREVTGPSLQRLELGFCGRGFGDDAAALVVAVAGGPLAELESLTLDGAYRLSDAGLIKLLSAAPALRRLSLAQGSRFTSALLDKLPE 257
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A836CJL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.550e-15 Identity = 50/114 (43.86%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 28 RGRGSRVGKVAKVSSLFDMCLA-----------------------------LVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQM 282 RGRGS +G+ +V+ LF++CL+ LVADNF VE LG +T E RNRL +LCRQL+LT E L+ L GVAE++LPDCSRI+ QM Sbjct: 326 RGRGSLIGRACRVAPLFNLCLSVVVQWXXXXXXXXXXXXXXXXXXXXXXXXLVADNFDCVEELGDVTPEVRNRLGALLCRQLQLTPEVLSRLAAP-GVAEVVLPDCSRIDAQQM 438
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Match: A0A2H9ZUT8_9ASPA (F-box protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZUT8_9ASPA) HSP 1 Score: 84.0 bits (206), Expect = 1.570e-15 Identity = 56/183 (30.60%), Postives = 97/183 (53.01%), Query Frame = 1 Query: 7 LKVNWQPRGRGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEARNRLTVMLCRQLKLTNETLATLMEEEGVAELILPDCSRIEPSQMLESLLQCRS-TLRVLCLGTCGRCLGDDTVEA-LAREGG-MPCLERVTLGGAYRLTDAGVLKLVQTCPSLTGLELPAGPGITRASVEALADR 546 +K+ W P + V SL D+C+ ++ DN + +ESL + +++L ++LCR ++++ L L+ + A++ L DCS + E QC + L+ L L CGRCL D + + LA+ +P L R++L GAY L+D G+ +V + P L L + +T + A+AD+ Sbjct: 481 VKIPWTPSIKQKPVTLEKSAPSLKDLCMDVLCDNAEEIESLEGLPDAIKSKLAMLLCRLRRMSSRVLG-LLTKGSPADVYLSDCSWTTETVFEEVFSQCNTGNLKALQLDFCGRCLPDYVLHSTLAKSPNCLPSLNRLSLKGAYCLSDGGLSMIVASAPLLRSLNVSQCSLLTYRGIIAVADK 662 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10236.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10236.1.1 >prot_D-mesarthrocarpus_Contig10236.1.1 ID=prot_D-mesarthrocarpus_Contig10236.1.1|Name=mRNA_D-mesarthrocarpus_Contig10236.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=183bp MKLKVNWQPRGRGSRVGKVAKVSSLFDMCLALVADNFQYVESLGTMTTEAback to top mRNA from alignment at D-mesarthrocarpus_Contig10236:1189..3986+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10236.1.1 ID=mRNA_D-mesarthrocarpus_Contig10236.1.1|Name=mRNA_D-mesarthrocarpus_Contig10236.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2798bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10236:1189..3986+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10236:1189..3986+ >mRNA_D-mesarthrocarpus_Contig10236.1.1 ID=mRNA_D-mesarthrocarpus_Contig10236.1.1|Name=mRNA_D-mesarthrocarpus_Contig10236.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=549bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10236:1189..3986+ (Discosporangium mesarthrocarpum MT17_79)back to top |