mRNA_D-mesarthrocarpus_Contig10235.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10235.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10235.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A7S4DJX3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJX3_HETAK)

HSP 1 Score: 105 bits (263), Expect = 1.670e-24
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 1
Query:   19 PRLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGI 309
            PRLP+  +VTDGAVANE+EICR A D+A       G +R FT GIG + NRYFL+MLAQ GRGY+ + LY  ++ + +  LMA+T  PVLT I+LG+
Sbjct:   36 PRLPVAFLVTDGAVANEKEICRRAADRAF------GDMRVFTFGIGPYANRYFLRMLAQQGRGYTDVCLYPDSLRRKMEKLMARTQAPVLTQITLGV 126          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: C1EAC0_MICCC (VWFA domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EAC0_MICCC)

HSP 1 Score: 91.3 bits (225), Expect = 3.790e-19
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 1
Query:   16 LPRLPLTVIVTDGAVANEREICRFARD--KAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGIPGLPES 327
            L  +PL  +VTDGAV NEREICR+ ++   A    G     R  T GIG + N YFLKML+QIG+G S  +     +G  + +L+  + TPVLTD+ LGIPG  ES
Sbjct:  393 LGAVPLIYVVTDGAVENEREICRYMQEVMSAPPPEGLMTHPRVCTFGIGRYCNHYFLKMLSQIGKGLSDAAYTDERVGSQMIALINASRTPVLTDVMLGIPGAGES 498          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A388L1S5_CHABU (VWFA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L1S5_CHABU)

HSP 1 Score: 81.6 bits (200), Expect = 9.030e-16
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1
Query:    1 MVDSGLPRLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGIPGLPE 324
            M+DS +  +P   ++TDGAV++EREIC+     A  +GG    + TF  GIG + N +FL+MLA IGRG +  +     + + +  L+    TP+LT++ L IP LP 
Sbjct:  456 MLDSAVGGVPYVFLITDGAVSDEREICKEMHSVASARGGSAPRISTF--GIGHYCNYFFLRMLAVIGRGIADAAFTQDKVKEQMERLLLAASTPLLTNLQLSIPDLPH 561          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A7S1UIU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIU5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.140e-15
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1
Query:   25 LPLTVIVTDGAVANEREICRFAR-DKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGIPG 315
            LP+ ++VTDGAVANER+I  F + +  +   GG    R FT GIG F NRYFL+MLA  G+GYS   L + ++ K ++ L+  +  PVLT +S  + G
Sbjct:  370 LPVVIMVTDGAVANERDIVNFVKANNDEGNNGGNPAARIFTFGIGPFCNRYFLQMLATYGKGYSDFYL-SDDLHKKMSHLLMMSANPVLTMLSFQVGG 466          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A1Y1I1F1_KLENI (VWFA domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1F1_KLENI)

HSP 1 Score: 78.2 bits (191), Expect = 1.490e-14
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:   25 LPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGIPGLPE 324
            +P   ++TDGAV NEREIC+  +  A +   G    R  T GIG F N +FLKMLA IGRG +     T  + + +  ++     PVLT+++L I GLPE
Sbjct:  529 VPYVFLITDGAVDNEREICKSMQ--AHIAAAGSRAPRISTFGIGTFCNYFFLKMLASIGRGLNDAVFDTDLLKEQMERMLVAASAPVLTNLTLRIEGLPE 626          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A2R5G9K7_9STRA (von Willebrand factor A domain-containing protein 5B1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9K7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.800e-13
Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 1
Query:   22 RLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGIPGLPE 324
            RL    +VTDGAV NEREIC+FA   A         VR F  GIG+  N YFL+ LA IGRGY+ + +    +   +TSL +     VL D+S+ +  +P 
Sbjct:  606 RLRTIFVVTDGAVENEREICKFAGCIAPE-------VRLFAFGIGVDCNAYFLRKLASIGRGYADVCMLRTQVRAKMTSLFSHAQLAVLKDVSVELEPMPS 699          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: C1MHV2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MHV2_MICPC)

HSP 1 Score: 73.6 bits (179), Expect = 6.190e-13
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:   10 SGLPRLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGI 309
            +G   +P   ++TDGAV++E+EIC+    ++Q +G     V TF  GIG + N YFLKMLA IGRG    +     I   ++ ++    +PVLT+I +G+
Sbjct:  397 AGNGTVPFVFLITDGAVSDEKEICKMLMAESQQKGEALPRVCTF--GIGQYCNHYFLKMLANIGRGLFDAAFTNDKIATQMSKMLTAARSPVLTNIEIGV 494          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A7S1JEC6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JEC6_9EUGL)

HSP 1 Score: 68.9 bits (167), Expect = 2.120e-12
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   25 LPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGI 309
            +P    +TDG++ANE+++C+F   K  +       +R    GIG + N +FLK LAQ+G G+S +SL   +I + +  L  K   P+LTD+ +G+
Sbjct:   29 MPFLFFLTDGSMANEKKVCQFI--KKAIARPDMSRLRICAFGIGPYCNTFFLKTLAQLGGGFSDVSLLGTSIFQKMACLFQKFENPILTDVQVGV 121          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A2R6WED1_MARPO (VWFA domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WED1_MARPO)

HSP 1 Score: 72.0 bits (175), Expect = 2.140e-12
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 1
Query:   25 LPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGI 309
            +P   ++TDGAV +ER ICR  +    +  GG    R  T GIG + N YFLKMLA IGRG S ++  +  I   +  ++    TP+LT+ISL I
Sbjct:  449 VPYIFLITDGAVNDERGICRLMQ--TALSQGGSAAPRISTFGIGHYCNFYFLKMLALIGRGLSDVAFSSDKIRDQMEKMLVAASTPLLTNISLAI 541          
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Match: A0A7S3LKG5_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKG5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.440e-12
Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   22 RLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLGIGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDISLGI 309
            R+ +  ++TDGAV NER+ICRFA+  A          R F+ GIG   N YFL+ LA +GRGY+ ++L    +   +++L      P+LT++++ +
Sbjct:  450 RISMMFVITDGAVENERDICRFAQRIADT-------TRIFSFGIGRDCNAYFLRKLASLGRGYTDIALIQREVKGQMSALFKCAKLPILTELAVSL 538          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10235.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DJX3_HETAK1.670e-2454.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
C1EAC0_MICCC3.790e-1947.17VWFA domain-containing protein n=2 Tax=Micromonas ... [more]
A0A388L1S5_CHABU9.030e-1638.89VWFA domain-containing protein n=1 Tax=Chara braun... [more]
A0A7S1UIU5_9STRA3.140e-1544.90Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1Y1I1F1_KLENI1.490e-1442.00VWFA domain-containing protein n=1 Tax=Klebsormidi... [more]
A0A2R5G9K7_9STRA1.800e-1341.58von Willebrand factor A domain-containing protein ... [more]
C1MHV2_MICPC6.190e-1338.00Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S1JEC6_9EUGL2.120e-1235.79Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2R6WED1_MARPO2.140e-1242.11VWFA domain-containing protein n=2 Tax=Marchantia ... [more]
A0A7S3LKG5_9STRA5.440e-1236.46Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10235contigD-mesarthrocarpus_Contig10235:380..1570 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296587.XP_002503574.1
PFAMsVWA_3
Model size333
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.22e-20
EggNOG OGsCOG2304@1|root,2QSCC@2759|Eukaryota,37KTA@33090|Viridiplantae,34K0X@3041|Chlorophyta
DescriptionInter-alpha-trypsin inhibitor heavy
Cds size333
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.965666-CDS-D-mesarthrocarpus_Contig10235:379..5091680789165.965666-CDS-D-mesarthrocarpus_Contig10235:379..509Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10235 380..509 +
1680789165.9772425-CDS-D-mesarthrocarpus_Contig10235:1367..15701680789165.9772425-CDS-D-mesarthrocarpus_Contig10235:1367..1570Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10235 1368..1570 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10235.1.2prot_D-mesarthrocarpus_Contig10235.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10235 380..1570 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10235.1.2

>prot_D-mesarthrocarpus_Contig10235.1.2 ID=prot_D-mesarthrocarpus_Contig10235.1.2|Name=mRNA_D-mesarthrocarpus_Contig10235.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp
MVDSGLPRLPLTVIVTDGAVANEREICRFARDKAQVQGGGRGGVRTFTLG
IGIFVNRYFLKMLAQIGRGYSALSLYTPNIGKDITSLMAKTHTPVLTDIS
LGIPGLPESG*
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mRNA from alignment at D-mesarthrocarpus_Contig10235:380..1570+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10235.1.2 ID=mRNA_D-mesarthrocarpus_Contig10235.1.2|Name=mRNA_D-mesarthrocarpus_Contig10235.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1191bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10235:380..1570+ (Discosporangium mesarthrocarpum MT17_79)
ATGGTGGACAGCGGCCTCCCCCGCCTCCCCCTCACGGTCATTGTAACAGA TGGTGCGGTGGCCAATGAGCGGGAGATATGCCGATTCGCCAGAGACAAGG CGCAGGTGCAGGGGGGTGGGCGAGGGGGGGGTTGACGACAAAGATTGATG GCCTGTTTCCTGTCATGTCTGGCGGGGTGCGCTCTTTCTTTTTTTCTTTT TTGCCCTCTGTGTTTGTTGGTTCGCTCACACTTTGTCAGGGTGGTCACAT CTCAAAAATGTGTAACCAGGAAATAAAAGCTGTGGTGTTGCGCTGTGGAA TATTCCTGGGATGGTGTGGAATATTCCTGGGATGGCGTGGGATGTTCCTG GGATAGTGTGGAATATTCCTGGGATGGTGTGGAGTATTCCTGGGATAGTG TGGAGTATTCCTGGGATAGTGCGAGAGCACAGGTGGAGGAGGGGGGCGGG GGTGATCCGGCATAAGAAAATTTTTCAGAGGAACTCTGCTTTTTTTTGTC ATTTTTTTACGGTATGCTGGACATGCTATGTGTGCTCTGCTTTCTTTTTG TATCGAGTTATGTAATGGATAAAGGGTTAAGGTTAGGGTTAGGTCGCAGC TGCTGAAAGCGCTGTTGTATGCGGGGGGTTGCTGTCCTGCTAAAAAATGG AGGGAAGGACTGGAGGACATTTCCCCCCACCCCCCCATGTTTTGCTTTTT CTCTTTCATCTAGTTTTTTGTGTGCTTCTGAGACCCTTTGAGCTTTGGAC CCTATGCTTTAGAGACAATCCTCTGGCTCTGGAGCCTGCGCCAGGGCTCT AGAGCTTCCCCCCCCCCCTCACCCTTTACTTTCTCTGAGCAGTGGAATCT CCCTTTATTGTGTATGTTTTGTTTCACCCTCCCTCTCCCCACTCCCCCCT TTTTCCCCACCGCCAGCAGTCAGTGTGTGTGTTTTGTTTCACCCTCCCTC TCCCCACTCCCCCCTCCCTCCTCACCGCCACCAGTCAGTGCGGACCTTCA CCTTGGGCATTGGAATCTTTGTGAACCGCTACTTCCTCAAAATGCTTGCC CAAATTGGGCGGGGGTATAGCGCCCTGTCCCTGTACACCCCCAACATCGG CAAGGACATCACCTCCCTCATGGCTAAGACCCACACGCCTGTGCTCACGG ACATAAGCCTGGGGATCCCCGGGCTGCCTGAGAGTGGGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10235:380..1570+

>mRNA_D-mesarthrocarpus_Contig10235.1.2 ID=mRNA_D-mesarthrocarpus_Contig10235.1.2|Name=mRNA_D-mesarthrocarpus_Contig10235.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10235:380..1570+ (Discosporangium mesarthrocarpum MT17_79)
ATGGTGGACAGCGGCCTCCCCCGCCTCCCCCTCACGGTCATTGTAACAGA
TGGTGCGGTGGCCAATGAGCGGGAGATATGCCGATTCGCCAGAGACAAGG
CGCAGGTGCAGGGGGGTGGGCGAGGGGGGGTGCGGACCTTCACCTTGGGC
ATTGGAATCTTTGTGAACCGCTACTTCCTCAAAATGCTTGCCCAAATTGG
GCGGGGGTATAGCGCCCTGTCCCTGTACACCCCCAACATCGGCAAGGACA
TCACCTCCCTCATGGCTAAGACCCACACGCCTGTGCTCACGGACATAAGC
CTGGGGATCCCCGGGCTGCCTGAGAGTGGGTGA
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