mRNA_D-mesarthrocarpus_Contig10222.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: D7G2L3_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L3_ECTSI) HSP 1 Score: 140 bits (353), Expect = 7.200e-37 Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA+DFE TAPSL+TTCIYGG+PYRPQE+A R G+D+VVGTPGRLLDH RG L L++ EF+ILDEADQMLDMGFKEEMEKV Sbjct: 234 LAKQVAADFELTAPSLKTTCIYGGAPYRPQEDALRWGVDVVVGTPGRLLDHVGRGTLQLSDAEFIILDEADQMLDMGFKEEMEKV 318
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A836CJP1_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP1_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.990e-35 Identity = 64/85 (75.29%), Postives = 74/85 (87.06%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA+DFE TAP LRTT IYGG+PYRPQEEA RRG+DIVVGTPGR++D +RG L L++T++ ILDEADQMLDMGFKEEMEKV Sbjct: 227 LAKQVAADFESTAPQLRTTTIYGGAPYRPQEEALRRGVDIVVGTPGRIIDMMDRGTLKLDQTDYFILDEADQMLDMGFKEEMEKV 311
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A067BZY7_SAPPC (RNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY7_SAPPC) HSP 1 Score: 119 bits (299), Expect = 1.670e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA++FEQTAPSL+TTCIYGG+ Y+ Q + FR G+DIVVGT GR+ DH RG L LNE +FLILDEAD ML+MGF+E+++KV Sbjct: 167 LAKQVATEFEQTAPSLKTTCIYGGASYQSQNQDFRDGVDIVVGTTGRICDHLERGTLRLNECKFLILDEADTMLEMGFREDIQKV 251
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A2P4XMK3_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMK3_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.370e-29 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVAS+FE T PSL T CIYGG+ Y+ Q AFR G+DI+VGT GR++DH +RGNL L+ EFLILDEAD ML+MGF+E+++KV Sbjct: 187 LAKQVASEFELTGPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKV 271
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: K8YSG2_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSG2_NANGC) HSP 1 Score: 119 bits (298), Expect = 2.550e-29 Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPS-LRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA +FE AP+ LR+ CIYGG+PYRPQEEA RRG+ +VVGTPGR+LDH RG L L+ FLILDEAD MLDMGFK++++KV Sbjct: 226 LAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKV 311
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A1V9YZB2_9STRA (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZB2_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.180e-29 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA++FEQTAPSL+TTCIYGG+ Y+ Q + FR G+DIVVGT GR+ DH +RG L L + EFLILDEAD ML+MGF+E+++KV Sbjct: 167 LAKQVATEFEQTAPSLKTTCIYGGASYQSQNQDFRNGVDIVVGTTGRICDHLDRGTLKLTDCEFLILDEADTMLEMGFREDIQKV 251
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A1W0A9D4_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9D4_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.270e-29 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA++FEQTAPSL+TTCIYGG+ Y+ Q + FR G+DIVVGT GR+ DH RG L LN+ +FLILDEAD ML+MGF+E+++KV Sbjct: 152 LAKQVATEFEQTAPSLKTTCIYGGASYQSQNQDFRDGVDIVVGTTGRICDHLERGTLRLNDCKFLILDEADTMLEMGFREDIQKV 236
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A7R9U1A7_9STRA (RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1A7_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.540e-29 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVA DFE TAPSL + C+YGG+P+ PQ G+DIV+GTPGR++DH NRGNL L F ILDEADQMLDMGFKEE+E++ Sbjct: 243 LAKQVAQDFELTAPSLTSLCVYGGAPFDPQIRTLHSGVDIVIGTPGRVVDHINRGNLRLQHLRFAILDEADQMLDMGFKEELEQI 327
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A5D6XH22_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH22_9STRA) HSP 1 Score: 117 bits (294), Expect = 8.550e-29 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVAS+FE TAP+L T CIYGG+ Y Q EAFR+G+DI+VGT GR++DH +RGNL L+ EFLILDEAD ML+MGF+E+++KV Sbjct: 188 LARQVASEFELTAPTLSTVCIYGGASYNSQNEAFRQGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKV 272
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Match: A0A3R7GZH5_9STRA (RNA helicase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GZH5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.110e-28 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 4 LVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLDHANRGNLILNETEFLILDEADQMLDMGFKEEMEKV 258 L QVAS+FE TAPSL T CIYGG+ Y+ Q AFR G+DI+VGT GR++DH +RGNL L+ EFLILDEAD ML+MGF+E+++KV Sbjct: 186 LAKQVASEFETTAPSLATVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKV 270 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10222.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10222.2.1 >prot_D-mesarthrocarpus_Contig10222.2.1 ID=prot_D-mesarthrocarpus_Contig10222.2.1|Name=mRNA_D-mesarthrocarpus_Contig10222.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=93bp MLVSQVASDFEQTAPSLRTTCIYGGSPYRPQEEAFRRGLDIVVGTPGRLLback to top mRNA from alignment at D-mesarthrocarpus_Contig10222:1745..2551+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10222.2.1 ID=mRNA_D-mesarthrocarpus_Contig10222.2.1|Name=mRNA_D-mesarthrocarpus_Contig10222.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=807bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10222:1745..2551+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10222:1745..2551+ >mRNA_D-mesarthrocarpus_Contig10222.2.1 ID=mRNA_D-mesarthrocarpus_Contig10222.2.1|Name=mRNA_D-mesarthrocarpus_Contig10222.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=279bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10222:1745..2551+ (Discosporangium mesarthrocarpum MT17_79)back to top |