Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Match:
D8LM75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM75_ECTSI)
HSP 1 Score: 119 bits (299), Expect = 2.410e-23
Identity = 142/445 (31.91%), Postives = 190/445 (42.70%), Query Frame = 1
Query: 1531 RALGALCARLSRSLLGKALGTWK-HATVESRL--REALGTLQGERGAAALGAVVGR----------ALWRSQL---------RAFRQLRSVVSAGARVEQGARAVVAILSREQTRRREALLVWGLWAWRVKAAEELRAEAEQRRKGTELVLRARALVGLLLKRRRRLLEVAFEAVVAYGAWAIYH-SARNQSRLQRV-EVGSRVLERVGSRRWA---ARRGAAFVAWRSLALDRGSWAQVLQRLDRHWRRRLLSQGFQAIVARGAWGIYDSKEAEGLSYRLWAGARLVQRALSRRLAMRAVGVLAHWRHLVAEAG-IEDGGQRLLQAK-RESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMRMIGDLRLSDTCRRAGATLMARALWAGRRRALGNALRTWRTETRAAADAELQSLEMHFHVASTVLRVERRSYAARV 2778
R L AR++R + A W+ HA R R L + Q GA LG+VV R ALWRS RA LR +GAR GAR + S RRR W W KAA + + +R + L R R +++A+ GAW + +AR+ + + RV E R L G RW A RG A A + A+ L L + R L++GF I+ GAW IY SKE E + RL G + + RA +RR R L+ WRH +E+ E+ G LLQA+ + + G R D R+ + AG L+ L + RRRAL A WR E RAAADAELQS+E HFH+A T+ RVERR+ A++
Sbjct: 1126 RGLKRTAARITRRRVAGAFARWQCHAAEAGRRSDRALLVSAQRRTGAKMLGSVVARREASARSRAWALWRSGAASAAIHDGERASADLRV---SGARHSAGARLLAT--SMGGARRRVLWKAWRTWCGEAKAAADAELQTMERHFH----------LARTLTRVERRVQLAW----VRGAWQTWRRNARSVACVPRVAERSRRALLAQGMNRWRIANAERGQAEAERERAAAEEAVRARALWGLLKRRASRQLAEGFNRILMHGAWVIYLSKEEEVRADRLSQGFQCLARACARRGERRKSAALSRWRHAASESRRYEERG--LLQARSKRAAAKTLASLVSHRERSHLARAWAIWCSGVASAAIHEGERASADRRVLGARQSAGCRLLVGVLGSARRRALAKAWSVWRKEVRAAADAELQSMEKHFHLARTLTRVERRTQLAKM 1549
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Match:
A0A6H5KQH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH8_9PHAE)
HSP 1 Score: 113 bits (282), Expect = 2.180e-21
Identity = 143/446 (32.06%), Postives = 189/446 (42.38%), Query Frame = 1
Query: 1531 RALGALCARLSRSLLGKALGTWKHATVESRLRE---ALGTLQGERGAAALGAVVGR----------ALWRSQL---------RAFRQLRSVVSAGARVEQGARAVVAILSREQTRRREALLVWGLWAWRVKAAEELRAEAEQRRKGTELVLRARALVGLLLKRRRRLLEVAFEAVVAYGAWAIYH-SARNQSRLQRV-EVGSRVLERVGSRRWA---ARRGAAFVAWRSLALDRGSWAQVLQRLDRHWRRRLLSQGFQAIVARGAWGIYDSKEAEGLSYRLWAGARLVQRALSRRLAMRAVGVLAHWRHLVAEAG--IEDGGQRLLQAK-RESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMRMIGDLRLSDTCRRAGATLMARALWAGRRRALGNALRTWRTETRAAADAELQSLEMHFHVASTVLRVERRSYAARV 2778
R L AR +R + A W+ T E R L + Q GA LG+VV R ALWRS RA LR +GAR GAR + + RRR W W KAA + AE + + L AR L ++ RR +L V GAW + +AR+ + + RV E R L G RW A RG A A + A+ L L + R L++G I+ GAW IY SKE E + RL G + + RA + R R L+ WRH +E+ +E G LLQA+ + + G R D R+ + AG L+ L + RRRAL A WR E RAAADAELQS+E HFH+A T+ RVERR+ A++
Sbjct: 333 RGLKRAAARTTRRRVAGAFARWQCHTAEVGRRSDRALLVSAQRRTGAKMLGSVVARREASARSRAWALWRSGAASAATHDGERASADLRV---SGARHSAGARLLATAMGG--ARRRVLWKAWRTWCGEAKAAAD--AELQTMERHFHL---ARTLTRVV--RRVQLAWVR-------GAWQAWRRNARSVACVPRVAERSRRALLAQGMNRWRIANAERGQAEAERERAAAEEAVRARALWGLLKRRASRQLAEGLNRILRHGAWVIYLSKEEEARADRLSRGFQCLARACAWRGERRKSAALSRWRHAASESRRFVERG---LLQARSKRAAAKTLASLVSHRKRSHLARAWAIWRSGVASAAIHEGERASADRRVLGARQSAGCRLLVGVLGSARRRALAKAWSVWRKEVRAAADAELQSMEKHFHLARTLTRVERRTQLAKM 756
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 2.41e-23 / Id = 31.91 Expect = 2.18e-21 / Id = 32.06 Sequence D8LM75_ECTSI A0A6H5KQH8_9PHAE
Match Name E-value Identity Description
D8LM75_ECTSI 2.410e-23 31.91 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5KQH8_9PHAE 2.180e-21 32.06 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Model size 3736 Hectar predicted targeting category mitochondrion Exons 3 Cds size 3732
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789165.5583456-CDS-D-mesarthrocarpus_Contig1022:7652..7876 1680789165.5583456-CDS-D-mesarthrocarpus_Contig1022:7652..7876 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1022 7653..7876 + 1680789165.5721776-CDS-D-mesarthrocarpus_Contig1022:9138..9637 1680789165.5721776-CDS-D-mesarthrocarpus_Contig1022:9138..9637 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1022 9139..9637 + 1680789165.5822613-CDS-D-mesarthrocarpus_Contig1022:10253..13262 1680789165.5822613-CDS-D-mesarthrocarpus_Contig1022:10253..13262 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1022 10254..13262 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1022.2.1
>prot_D-mesarthrocarpus_Contig1022.2.1 ID=prot_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=1244bp
VAKLVAAAGARAGRGQLLRGWGALERNRWGEQARALAAAHEAVEVERDFL back to top mRNA from alignment at D-mesarthrocarpus_Contig1022:7653..13264+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1022.2.1 ID=mRNA_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:7653..13264+ (Discosporangium mesarthrocarpum MT17_79)GTGGCGAAGCTGGTGGCCGCTGCGGGGGCAAGGGCGGGCAGGGGCCAGCT
GCTACGGGGCTGGGGGGCGTTGGAGAGGAACAGATGGGGGGAGCAGGCTC
GTGCATTGGCAGCAGCCCACGAGGCAGTGGAGGTGGAGAGGGATTTCCTC
CAGGAGGAGGTGAGGAGGATGCAGCTTTGGAGGGGGCTCACCATCCTGGC
TGGCTGTGTTGGCAAGAGGGACAG GTGAGGGTGTTGAAGGTTTTTTTTTT
TTGGGGGGGGGGATGGGAGAGGGGTGGCTGGGGAGGGGCCTGCGGGCTTA
TCAAGGACCTGTTGTCAGATCAAGACCTTGCCTCTTGGGTGTGTTGTTAT
ATGCGTGTATTCACTGCCCTTGTCTGTGAGTGGATTGATGATGTGCTGTG
ATCAATAACATACCACAGTGGGGGGCGGCTGCTGCTGCTGCTGCTGCTGC
TCTGGGCAATGCTTCTCGCTCTGGGTGACCTTGGCTTCCAGGCGAAGGGA
GAGGGGGGGGGAGGAATCGCGCTGGCAGTGTCTTCTGATAGCTCTCCTGA
GTTTTGGCTACTCCCTCACAACTGTCCCTACGAACAGCAGACCCTGGTGC
TATGGACAAAGTCTATTGTAGAGTGTGCTGAGCGTGCGCTGCAGCCTCTT
GTGTATTTTGAAAAGTCATAATGTACCTAAAGTACCTGTCCGCCCATATG
TGCCCGACAACTGTTGCGCTACCTTGCGGCCACCGCCCCGACCTGTGTAT
CCCTCCTGCCCCCTGCCCATGTAAGCCCCGCCCCCGCTATTGATTTACCT
AATCCCCTCTCTACACCCCCTGCGTACTGACATGACTGCCGAGATCATGT
CTTTGCGCCTACCACGCTGCATGCCATGCACATCCGAAGTACCCCAACCC
TAACCCTTACCCTTACACTTACCCTAGCCCTTACCCTAACCCTTACCCTT
ACACTTACCCTAGCCCTTAGCCTAACCCTTACCCTTACACTTACCCTAGC
CCTTACCCTAACCCTTACACTTACCCTAGCCCTTAGCCTAACCCTAACCC
TTACACTTACCCTAGCCCTTACCGTAACCCTTACACTTACCCTAGCCCTT
ACCCTAACCCTTACACTTACCCTAGCCCTTACCCTAACCCTTACCCTTAC
ACTTACCCTAGCCCTTAGCCTAACCCTTACCCTTACACTTACCCTAGCCC
TTAGCCTAACCCTTACCCTTACACTTACCCTAGCCCTTACCCTAACCCTT
ACCCTTACACTTACCCTAGCCCTTAGCCTAACCCTTACCCTCACCCTATA
CCTGTATTACTACAACTCCTACATGCTAACCCTAACCCTAACCCTTACCC
TTACCCTTACCCTTACCCTAACCCGAACCCTAACCCCCCTTCCCCTCACC
CCGCCCCTGCACCTGTCCCTCGCCAATCGTTTCATCACACCCTGCCATTG
TGTCACGTCCACCGGAAAAAAACAACACACACCCAGGGCAATGCTAGCCA
GGGCCTGGGGAGAGATTCGGCAGGAGGGGCTCTCCCGGGCCGTCCTTACC
CGTGCCGTTGCCGCCCTCCTCCACTCCCACCGGTGGCAGCTCCGGGGTGC
CTTCCACCGCCTTCAACTGGCTGGGGCCGAGGCCATGGCCCGACGCACCC
ATGCGTTGACCGCGCGAGCCACTCTGGGTCGTGCCCTGGTGGCTCGGAGC
CGCCGGAAGTGGCTCGCGCCGGCCTGGAGGGGATGGAAGGCCCTGGTGCA
AGATCAGCAGGAGGAGGAGGAGTGGTTCGAGCGCCGAGAAGGGGTCAGGC
TCCGGGCGGCTGTGCTGATCGCCCGCGTGACGGATGGGCGGGACCGGCTC
CGGCTCCAGAGGGGTGTGGCAGCCTGGAGGCTGGCCATGGAGAGGGCGAG
GGCGGCGGAGGTCTGGCGGGAGGCAGAGAAAACCCGGCGGGAGGTGGAGG
AGTGGGCGGAGGCAGCGGCGGGGGCAGGGGCACAG GTGAGTCGAAAGGAG
GGATGCTTCGCGTGAGTTGACCTACAGCCTGAAGTGACTTGATTTTCCGG
TCAGATCTGATACAGCCCGAATTGAAGATTTCATCGTGTCACTTCAGGTC
AGGTCAAATGTGTCGGTAAAAAAAAAAAAACAACTGTAACTATTTCTTTG
TGGCACGGTTAAATATTTATGCTGGCATTACCACGGTTAAAAAGAGTACA
AGAAACAGGCAAAAAAGCACAAGAAACAGGCAAAAAAGAAACGAATTGGG
CGAAAAGGAGCGAAAAGTCAGTCAAACAAAGGTAAAGCAAAACAACCTAC
CTTAGTTTAGATGCTTCAACACCAGGAAATTCTTGGTCTGTGCATCGCTC
TGGAACTCTCAATTGATTGCACTGGAGGAACGATGGGTTGATCTGTTTAG
AATGTTGGCAAGGTGTCAGTCTGACCATGAACCGGTCCGACAGGTCTAAA
ATGACCTGAGATCCAGGCCTTGTGACCTGGTCCAAGAAATCCAAGAAAAC
CCAAGAAAATCCTCTGCTAGGACTGAGTACTGCAACCCCTGCAAGCCCTG
TTAAATCACCCCCACACCCCCCCCCTTCCACCTGCCCCCTTTTTATGAAA
GGTTGCCTTGGTGTCAGCCCAAGCAGCTCACCACACCCGCCAATTGGGCG
CCCGCCTGCTCCTCCACTGGGCACGTCGGTGGCGCAGTCAGCGTCTGCTC
TGCTCCCTGAGGCTTTGGAGAGCAGTGACAGAGGCGTCTGCCAGTCAGGA
GCGTGCCCTCCGCCGCTGCCTCTCATGCTGGAGGCGGCGGGGGCTGTCCC
AGGCATTCCGGGGGTTGAGGGAGGCATCCATGGCCTGTGCTGCCGATAGG
GAGAGGATCTGGCGGCAGACCCGTGCTGTCAGCCTTGGGGCCTCCAGGGC
ACGGCGCCGCCGCCTGAGAGGGGCGTGGGCGGCATGGATCTTTTGGGCAC
GTGAGAGGCAGTCGGCAAGAGGGGCTCTGGGCCATGGAGCCCGTGCCCTG
GAGCGGATCCTCCACCGACACAAGGGTGGGGGGGCACTGCGGCGATCCTT
CGGAGCCTGGGTGGAGGCGGCCCGGGCAGAAGCGGAGGAGCGGGAGAGGG
CCAAGGGGAGGGAGAGGCGGTGCCAGCACCTGGTGGCGGTGGTGCTCCGG
GTGGGGGAGGGGGGCCGACTCCGGGCCAAGGTGCGCGCCCTGGGGCTGTG
GAGGCTCCATGCGGCGGCTGCGGCCTTCCAGGATGGCAGCCATGAGCTGA
GAGCCTCCCGGAAGGAGGCGGGTGTCCGTCAGATGGCCTCCACAGCCGGA
CGGGCCCTCCAGCGGAGGCAGGCCAGGGCGTGGGCCCGCCTCCTCAGCAG
CGGGGCTGCAGCCTCAGCGGCAAGGGAACAGGAGAGGGCCCGGGGGAAGA
GGCAGGGCCGGGCGCTGGGTGCTCTGTGTGCACGGCTCTCCCGCAGCCTG
CTAGGCAAGGCGTTGGGCACCTGGAAGCACGCGACTGTGGAGTCCCGCCT
GCGGGAAGCCTTGGGCACACTGCAGGGGGAGCGGGGCGCTGCCGCCCTCG
GAGCGGTCGTAGGTCGTGCTCTGTGGCGCTCCCAGCTCCGGGCGTTCCGA
CAGCTCCGGTCCGTGGTTTCTGCGGGAGCCAGGGTTGAGCAGGGCGCCCG
GGCGGTGGTTGCCATCCTGTCCAGGGAACAGACACGGCGGCGGGAGGCCC
TCCTAGTCTGGGGGCTATGGGCATGGCGGGTAAAGGCGGCGGAGGAGCTC
CGGGCGGAGGCCGAGCAGAGGCGGAAAGGGACGGAGTTGGTGCTGAGGGC
AAGGGCGCTAGTGGGTCTGCTCCTGAAGCGGCGGCGGCGGCTGCTCGAGG
TTGCATTCGAAGCCGTTGTGGCCTATGGGGCGTGGGCCATCTACCATTCC
GCACGGAACCAGAGCCGGCTCCAGCGGGTGGAGGTTGGCTCCAGGGTGCT
CGAAAGAGTGGGATCACGGCGGTGGGCCGCCCGGAGGGGCGCCGCCTTCG
TAGCCTGGCGCAGCCTGGCACTTGACCGGGGGTCATGGGCCCAGGTGCTC
CAGCGCCTTGACCGGCACTGGCGGCGCCGGCTCCTGAGCCAGGGCTTTCA
GGCGATCGTCGCCCGGGGCGCCTGGGGCATCTATGACTCTAAGGAGGCAG
AGGGCCTCTCTTACCGGCTCTGGGCGGGCGCACGGCTGGTCCAGAGGGCT
CTTTCCCGGCGCCTCGCCATGCGGGCAGTGGGGGTCCTGGCGCACTGGCG
GCATCTGGTAGCTGAGGCTGGGATTGAGGATGGGGGCCAGCGGCTGCTCC
AGGCCAAGAGGGAGTCTGGGGCCCGCCTCATGGCCAGGGCGCTCTCGCGT
GTGGCGACCACAAAATGTTCCAGGGCGTGGGCCTGCTGGCGTGCGTCGGC
TGCCTGGGCGGCGGCGGAGGAGGGCATGCGCATGATAGGGGACCTCCGGC
TCTCGGACACCTGCCGCCGGGCAGGGGCCACGCTCATGGCCAGGGCGCTC
TGGGCGGGCCGGAGGCGCGCCCTGGGGAATGCCCTGAGGACATGGCGCAC
AGAGACACGTGCTGCTGCGGACGCTGAGCTCCAGTCCCTGGAGATGCACT
TCCATGTGGCGAGCACAGTCCTGCGGGTGGAACGGCGGAGCTATGCAGCC
CGGGTGGCCCGGACATGGAGGCTCTGGGCGGCTCTGACCTGTGAGGCCAG
GTATGAGGACCAGCGGTTGGCAAAGGGTGGCCTTCGCCTGACCCAGGCCA
TGACAAGGGCATTGGAGGGGGCCCGGAGGCAGACACTGTTGCGGGCCTGG
AGAGCCTGGGTGAGGAAGGTGGCCCAGGACGGGTCGAGGAGGCTGATGGG
GGCGAGGTTTGGGCTGCTGGCCTCGCCAGGCCGCCCCAAGTCGAAGAAGT
CAATGTCCCCTCCCTCCTCTACCCCTGCCCCTGCCCCTGCCCCTGCCCCT
GCCCCTGTCCTAATGGGCTCTGTTGCAGGCACCACACACACAGCACAGCC
ACCCCCATCCCTTGGTGCTACTTCTGCCGAGAAGGCTCTCCAGGCAAGGC
GACATTCCTCTGAAGACAAGGGAAGGGAGATGGGGAACGGGGAGGAGGAG
AAGAACAAGCAGGCACCGACAGGCATGACCAAGGCCGGGGCAGGGTCTGG
ACTGAGGCTGAAGCCTGTAGCACCTCAGATACCTGTGGTGACCTGGAACC
AGGACGAACGGGACACCGGGGTGGCAGCATCCCCCCCTGGCGTGGCGGCA
ACGGCTGGGGTGCCGGGGACAGGGACAGGGGCAGGGGATTGGGCAGGGGA
TTGGGCAGGGGCTTGTCTGCCCCCCAACTCTCCGCCACCAGAGCAGCTCC
TCGCCCGGGACCGGTTGCTCCAGGGCACCCAGAGCAGCCTGCGGGTGCAA
CAAAGGCTCAAAGGAGGCAACCACGGAGCAGCAGGCTCGGCCGCCTCCCC
TTCCCCTAGGGTTATTCCTTGCATGCAGCAGTCGCCACAGCAGGGAGAGG
TGGTGGAGTCCCTGTGGGCAACGGAAAGCTGGGAGGCTGGGCAGGGAGAA
GGCAGCCTTGACCTAAGTGCCAGTTCCGAGGAAGGGTTTCGTAGCTTTTC
TGTGGGTGCC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1022:7653..13264+
>mRNA_D-mesarthrocarpus_Contig1022.2.1 ID=mRNA_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=3732bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:7653..13264+ (Discosporangium mesarthrocarpum MT17_79) back to top