mRNA_D-mesarthrocarpus_Contig10219.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI) HSP 1 Score: 238 bits (607), Expect = 3.560e-69 Identity = 121/196 (61.73%), Postives = 147/196 (75.00%), Query Frame = 1 Query: 4 ISREPSLASKVPEKEDQ--KNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 + E S + +VPE+ED+ NAINDLCFSPDGS+++VAV +RVLVYDAA+G L++SLRGHKDT V +V ++KDGK FASGGAD TVIIWT+KAEG+LKYTH++S+ R++Y PGT KL SCT DFGLW QEQ SV KHKV +KILS GWS DG HLALGF +G V IRD++GVEKV I R Sbjct: 1 MKSEVSWSDQVPEREDKPKSNAINDLCFSPDGSKLIVAVESRVLVYDAAEGELVNSLRGHKDT-----------------VLTVDYAKDGKHFASGGADHTVIIWTSKAEGVLKYTHNESIIRLAYSPGTTKLASCTQFDFGLWRQEQKSVVKHKVHAKILSAGWSPDGLHLALGFFDGNVGIRDVNGVEKVTITR 179
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: UPI0004964B74 (intraflagellar transport protein 122 homolog n=2 Tax=Clupeocephala TaxID=186625 RepID=UPI0004964B74) HSP 1 Score: 210 bits (535), Expect = 2.850e-66 Identity = 104/178 (58.43%), Postives = 130/178 (73.03%), Query Frame = 1 Query: 52 QKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 ++ + DL F PDGS++++A G RVLVYDAADG L+ L+GHKD IVY V+++KDGKRFASG AD ++IIWT+K EGILKYTH+ S+Q V+Y P T +L SC++ DFGLWS EQ SVNKHKV SKI CGW+ DGQ+LALG MNG VSIR+ +G EKV+IER Sbjct: 12 REQCVYDLAFKPDGSQLIIAAGLRVLVYDAADGALIQPLKGHKD-----------------IVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSGDFGLWSPEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIER 172
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A2P4XSI5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSI5_9STRA) HSP 1 Score: 213 bits (543), Expect = 4.560e-66 Identity = 110/187 (58.82%), Postives = 131/187 (70.05%), Query Frame = 1 Query: 25 ASKVPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 + KVPE+ +K + DL F PDGS +V AVG RVLVYDA DG LLHSL+GHK T VY+V +S DGKRFASGGAD+ VIIWT KAEGILKYTH+ S+Q+++Y P + L SCTA DFGLW+ EQ SV KHKV++KILS WS DGQ LALG +NG V++RD G EK IER Sbjct: 8 SDKVPERNGEKFVVQDLAFRPDGSHVVAAVGTRVLVYDAVDGTLLHSLKGHKGT-----------------VYAVDYSHDGKRFASGGADNIVIIWTDKAEGILKYTHNDSIQKLAYNPQSQCLASCTASDFGLWAPEQKSVAKHKVVAKILSACWSKDGQLLALGLLNGNVTLRDKLGAEKRLIER 177
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A485KGT5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGT5_9STRA) HSP 1 Score: 218 bits (556), Expect = 6.800e-66 Identity = 107/187 (57.22%), Postives = 135/187 (72.19%), Query Frame = 1 Query: 25 ASKVPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 + KVP++ K + D+ F PDGS++V A+G+RV++YDA +G LLHSL+GHKDT VY+V F+ DGKRFASGGAD+ VIIWT KAEGILKYTH++S+Q+V+Y P + L SCTA DFGLWS EQ SV KHKV+SKIL WS+DG++LALG NG++ IRD G EKV IER Sbjct: 8 SDKVPDRNGVKVVVQDIAFHPDGSQIVAAIGSRVMIYDAVNGTLLHSLKGHKDT-----------------VYTVDFAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILCANWSLDGEYLALGLFNGQILIRDKQGGEKVTIER 177
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA) HSP 1 Score: 226 bits (576), Expect = 5.140e-65 Identity = 114/186 (61.29%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 34 VPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADG--GLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 VP +EDQ INDLCFSPDG+++VVA G+R+LVYD G L HSLRGHKDT VY+V +S DGKRFASGGAD TVI+WT+KAEGILKYTH S+QRV+Y P L SCT +DFGLWSQ+Q SVNK KV +KI S WS DGQHLALGF++GK+ +RD +GVEKV I R Sbjct: 11 VPPREDQHIGINDLCFSPDGTQLVVAAGSRILVYDVQGGEVDLQHSLRGHKDT-----------------VYTVDYSSDGKRFASGGADKTVIVWTSKAEGILKYTHGDSIQRVAYNPCANVLASCTGIDFGLWSQDQKSVNKQKVHAKITSASWSNDGQHLALGFIDGKIIVRDKEGVEKVTISR 179
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A7S2B3U2_9STRA (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B3U2_9STRA) HSP 1 Score: 209 bits (533), Expect = 5.170e-64 Identity = 106/184 (57.61%), Postives = 129/184 (70.11%), Query Frame = 1 Query: 34 VPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 +PE++ +N++ DL FS DG +VVAV N VL+YDA +G LLH LRGHKDT VYSV+F +DG RFASGGAD TVIIWT K +GILKYTH+ S+Q+V Y P T +L SCTA DFGLWS+EQ SV KHKV ++LS WS DG++LALG NGK+SIRD G EK +ER Sbjct: 12 LPERDGVQNSVQDLDFSRDGEILVVAVANLVLIYDAKEGDLLHRLRGHKDT-----------------VYSVAFVRDGTRFASGGADKTVIIWTRKGDGILKYTHNDSIQKVCYNPSTDQLASCTAQDFGLWSKEQKSVAKHKVFPRVLSSAWSNDGKYLALGHENGKISIRDNKGAEKHVVER 178
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: UPI001C3479D1 ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C3479D1) HSP 1 Score: 206 bits (525), Expect = 1.280e-63 Identity = 103/177 (58.19%), Postives = 128/177 (72.32%), Query Frame = 1 Query: 55 KNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 + + DL F PDGS++++A G RVLVYD ADG L+ L+GHKD IVY V+++KDGKRFASG AD ++IIWT+K EGILKYTH+ S+Q V+Y P T +L SC++ DFGLWS EQ SVNKHKV SKI CGW+ DGQ+LALG MNG VSIR+ +G EKV+IER Sbjct: 13 EQCVYDLAFKPDGSQLIIAAGLRVLVYDTADGVLIMPLKGHKD-----------------IVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSGDFGLWSPEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIER 172
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A7S1T5J3_9CHLO (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5J3_9CHLO) HSP 1 Score: 210 bits (535), Expect = 2.530e-63 Identity = 106/187 (56.68%), Postives = 131/187 (70.05%), Query Frame = 1 Query: 25 ASKVPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 + K PE++ + D+ F PDGS+++ VGNRVLVYDA DG LLH+LRGHKDT VY V++++DGKRFASGGAD T+IIWT+KAEGILKY+H+ S+ ++Y P T +L S TA DFGLWS EQ SV KHKV SK+L W+ DGQ+LALG NG +SIRD GVEKV IER Sbjct: 8 SDKAPERDGVRPVCYDIAFKPDGSQLIAGVGNRVLVYDAGDGDLLHTLRGHKDT-----------------VYCVAYARDGKRFASGGADKTIIIWTSKAEGILKYSHNDSIVSLAYNPVTQQLSSATASDFGLWSPEQKSVAKHKVSSKVLCQAWTSDGQYLALGQYNGHISIRDKAGVEKVLIER 177
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A6P8P6H5_GEOSA (Intraflagellar transport protein 122 homolog n=2 Tax=Tetrapoda TaxID=32523 RepID=A0A6P8P6H5_GEOSA) HSP 1 Score: 205 bits (522), Expect = 5.200e-63 Identity = 103/190 (54.21%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 16 PSLASKVPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 P+ KV +++ + I DL F PDG++++VA GNRVLVYD +DG L+ L+GHKDT VY V+++KDGKRFASG AD +VIIWT+K EGILKYTH+ S+Q V+Y P T +L SC++ D GLWS EQ SV+KHK SKI C W+ DGQ+LALG NG VSIR+ +G EKV+IER Sbjct: 5 PTWIDKVHDRDKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHKDT-----------------VYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSSDVGLWSPEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIER 177
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Match: A0A8I5KSQ0_HUMAN (Intraflagellar transport protein 122 homolog n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A8I5KSQ0_HUMAN) HSP 1 Score: 202 bits (513), Expect = 6.640e-63 Identity = 98/181 (54.14%), Postives = 131/181 (72.38%), Query Frame = 1 Query: 43 KEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGGLLHSLRGHKDTARRGHRKDYLPLSCLLIVYSVSFSKDGKRFASGGADSTVIIWTAKAEGILKYTHSQSVQRVSYCPGTAKLISCTAVDFGLWSQEQNSVNKHKVISKILSCGWSVDGQHLALGFMNGKVSIRDLDGVEKVEIER 585 ++ ++ IND+ F PDG+++++A G+R+LVYD +DG LL L+GHKDT VY V+++KDGKRFASG AD +VIIWT+K EGILKYTH+ ++Q VSY P T +L SC++ DFGLWS EQ SV+KHK SKI+ C W+ DGQ+LALG NG +SIR+ +G EKV+IER Sbjct: 8 RDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDT-----------------VYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIER 171 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10219.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10219.3.1 >prot_D-mesarthrocarpus_Contig10219.3.1 ID=prot_D-mesarthrocarpus_Contig10219.3.1|Name=mRNA_D-mesarthrocarpus_Contig10219.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=196bp MISREPSLASKVPEKEDQKNAINDLCFSPDGSRMVVAVGNRVLVYDAADGback to top mRNA from alignment at D-mesarthrocarpus_Contig10219:1868..3335+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10219.3.1 ID=mRNA_D-mesarthrocarpus_Contig10219.3.1|Name=mRNA_D-mesarthrocarpus_Contig10219.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1468bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10219:1868..3335+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10219:1868..3335+ >mRNA_D-mesarthrocarpus_Contig10219.3.1 ID=mRNA_D-mesarthrocarpus_Contig10219.3.1|Name=mRNA_D-mesarthrocarpus_Contig10219.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=588bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10219:1868..3335+ (Discosporangium mesarthrocarpum MT17_79)back to top |