mRNA_D-mesarthrocarpus_Contig10219.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: D7FXW8_ECTSI (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXW8_ECTSI) HSP 1 Score: 196 bits (499), Expect = 5.640e-58 Identity = 130/251 (51.79%), Postives = 150/251 (59.76%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGH------GAVPSKVGIPSSQKEGGE---------SRDSSEAGTGGASLVEGVLAGQVAQMGQG----------DGGR------------------GDG----VMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGRN KDKRD++YRKAKEVGFRARSAFKLLQLDEEF LFEGV + VDLCAAPGSWSQVLAS+LLG G +K + GG + D E A+ E AG VA G G DGG G G V + E +++RIVAVDLQ MAPI GVK LQGDITS+ T EAI +FRGG A+LVV DGAPDVTGLHD+DEY+QAQ+ + + I Sbjct: 1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKRDTPAAAGCENAKAQLDDCDGSGGARGAPLSTAVATDDGEFDAASAAGPEAKGAGVVAGSGVGATDESGDIGPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNI 251
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A835ZAQ0_9STRA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ0_9STRA) HSP 1 Score: 192 bits (487), Expect = 2.380e-57 Identity = 112/204 (54.90%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MG+ KDKRDIYYR AKE+G+RARSA+KLLQLDEEF +F+GV R VDLCAAPGSWSQVLA+ L +G E A AQ G +++RIVAVDLQEMAPIPGVK LQGDITS++T EAI FRGGRADLVV DGAPDVTGLHD+DEYIQAQ+ + + I Sbjct: 1 MGKASKDKRDIYYRLAKEMGYRARSAYKLLQLDEEFGIFKGVSRAVDLCAAPGSWSQVLAANLWLKGE--------------------------------AEAEAATAAAQGGS--------------EEVRIVAVDLQEMAPIPGVKQLQGDITSLSTAEAIIDDFRGGRADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNI 158
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: C3ZIK7_BRAFL (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Branchiostoma TaxID=7737 RepID=C3ZIK7_BRAFL) HSP 1 Score: 182 bits (461), Expect = 1.940e-53 Identity = 101/204 (49.51%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR+ KDKRDIYYRKAKE G+RARSAFKL+Q+DEEF++ GV +VVDLCAAPGSWSQVL+ RL G+G +++ DD++IVAVDLQ MAPIPGV +QGDIT ++T + I G+F G +ADLVV DGAPDVTGLHD+DEYIQAQ+ + + I Sbjct: 1 MGRSSKDKRDIYYRKAKEEGWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQVLSKRLRGEG---------------------------------------------------------KQKSDDVKIVAVDLQAMAPIPGVIQIQGDITKVSTAQEIIGHFSGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNI 147
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A8J9VGR0_BRALA (FTSJ1 protein n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9VGR0_BRALA) HSP 1 Score: 181 bits (459), Expect = 1.190e-52 Identity = 101/204 (49.51%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR+ KDKRDIYYRKAKE G+RARSAFKL+Q+DEEF++ GV +VVDLCAAPGSWSQVL+ RL G+G +++ DD++IVAVDLQ MAPIPGV +QGDIT ++T + I G+F G +ADLVV DGAPDVTGLHD+DEYIQAQ+ + + I Sbjct: 1 MGRSSKDKRDIYYRKAKEEGWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQVLSKRLRGEG---------------------------------------------------------KQKRDDVKIVAVDLQAMAPIPGVIQIQGDITKVSTAQEIIGHFSGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNI 147
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: UPI001C4A8906 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4A8906) HSP 1 Score: 177 bits (448), Expect = 1.600e-52 Identity = 104/204 (50.98%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR+ KDKRDIYYR AKE G+RARSAFKLLQLD+EF+LF GV+R VDLCAAPGSWSQVL+ +L GQ +E GE E G++++IVAVDLQ MAP+PGV +QGDIT ++T + I +F G ADLVV DGAPDVTGLHDVDEYIQAQ+ + + I Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVLSRKLRGQ---------------EEKGEKA-------------------------------------EGGEEVKIVAVDLQAMAPLPGVTQIQGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNI 152
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A3Q2Y4X4_HIPCM (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=31 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A3Q2Y4X4_HIPCM) HSP 1 Score: 178 bits (451), Expect = 8.310e-52 Identity = 104/204 (50.98%), Postives = 121/204 (59.31%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR+ KDKRDIYYR AKE G+RARSAFKLLQLDEEF LF GV+R VDLCAAPGSWSQVL+ +L RG G E G++++IVAVDLQ MAP+PGV +QGDIT ++T E I +F G ADLVV DGAPDVTGLHDVDEYIQAQ+ + + I Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFSLFTGVNRAVDLCAAPGSWSQVLSRKL-------------------------------------------------------RGHGEKCEGGEEVKIVAVDLQAMAPLPGVTQIQGDITKVSTAEEIVRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNI 149
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A7S3DHH0_9EUKA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DHH0_9EUKA) HSP 1 Score: 177 bits (450), Expect = 1.210e-51 Identity = 105/204 (51.47%), Postives = 123/204 (60.29%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR KDKRDIYYRKAKE+GFRARSAFKLLQ+DEEFD+F GV+RVVDLCAAPGSWSQV++ +L A DGG R+V+VDLQ MAPI GV +LQGDITS+ TV+ I F GG+ADLV+SDGAPDVTGLHD+DEYIQAQ+ + + I Sbjct: 11 MGRCTKDKRDIYYRKAKEIGFRARSAFKLLQIDEEFDVFAGVNRVVDLCAAPGSWSQVVSKKL--------------------------------------------DAADQPTYDGGA------------RVVSVDLQAMAPIDGVTILQGDITSIDTVKNIISAFGGGKADLVLSDGAPDVTGLHDIDEYIQAQLLLAALNI 158
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A3B5B8W5_9TELE (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B5B8W5_9TELE) HSP 1 Score: 177 bits (448), Expect = 2.750e-51 Identity = 103/204 (50.49%), Postives = 124/204 (60.78%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MGR+ KDKRDIYYR AKE G+RARSAFKLLQLD+EF+LF GV+R VDLCAAPGSWSQVL+ +L GQ + E G E G++++IVAVDLQ MAP+PGV +QGDIT ++T + I +F G ADLVV DGAPDVTGLHDVDEYIQAQ+ + + I Sbjct: 1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVLSRKLRGQ---------------------EEKGEKG-------------------------------EAGEEVKIVAVDLQAMAPLPGVTQIQGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNI 152
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A7S3HRP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRP6_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.130e-51 Identity = 100/204 (49.02%), Postives = 123/204 (60.29%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MG+ KDKRDIYYRKAKEVGFRARSAFKL+Q+D+E++L +GV RVVDLCAAPGSWSQVL+S+L + +P+S+ E RIVAVDLQEMAPI GV + GDIT+ +T E I YF+G ADLV+ DGAPDVTGLHD+DEY+QAQ+ + + I Sbjct: 5 MGKTSKDKRDIYYRKAKEVGFRARSAFKLMQIDDEYNLLDGVSRVVDLCAAPGSWSQVLSSKLFNKD---------LPASETE----------------------------------------------KNRIVAVDLQEMAPIEGVLSIVGDITAQSTSEQIISYFQGDLADLVICDGAPDVTGLHDIDEYMQAQLLLAALNI 153
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Match: A0A433PLU5_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PLU5_9FUNG) HSP 1 Score: 176 bits (445), Expect = 3.540e-51 Identity = 102/204 (50.00%), Postives = 121/204 (59.31%), Query Frame = 1 Query: 1 MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAAPGSWSQVLASRLLGQGHGAVPSKVGIPSSQKEGGESRDSSEAGTGGASLVEGVLAGQVAQMGQGDGGRGDGVMEEEGDDIRIVAVDLQEMAPIPGVKMLQGDITSMATVEAITGYFRGGRADLVVSDGAPDVTGLHDVDEYIQAQVCVLVIGI 612 MG++ KDKRD+YYR AKE G+RARSAFKLLQL+EEF+LFEGVHR VDLCAAPGSWSQVL +L G+ H P +G+ +IVAVDLQ MAP+PGV LQGDIT ++T E I YF G AD+VV DGAPDVTGLHD+DEYIQAQ+ + + I Sbjct: 1 MGKSSKDKRDVYYRLAKEQGWRARSAFKLLQLEEEFNLFEGVHRAVDLCAAPGSWSQVLTKKL-GENHHKNP------------------------------------------------------DGNTPKIVAVDLQAMAPLPGVIQLQGDITKVSTAEQIISYFEGELADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNI 149 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10219.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10219.1.1 >prot_D-mesarthrocarpus_Contig10219.1.1 ID=prot_D-mesarthrocarpus_Contig10219.1.1|Name=mRNA_D-mesarthrocarpus_Contig10219.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=204bp MGRNQKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFDLFEGVHRVVDLCAback to top mRNA from alignment at D-mesarthrocarpus_Contig10219:28..1505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10219.1.1 ID=mRNA_D-mesarthrocarpus_Contig10219.1.1|Name=mRNA_D-mesarthrocarpus_Contig10219.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1478bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10219:28..1505- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10219:28..1505- >mRNA_D-mesarthrocarpus_Contig10219.1.1 ID=mRNA_D-mesarthrocarpus_Contig10219.1.1|Name=mRNA_D-mesarthrocarpus_Contig10219.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10219:28..1505- (Discosporangium mesarthrocarpum MT17_79)back to top |